KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:22:29 2014  Check: 00 ..

 Name: ENSTTRP00000016412/1-194  Len:    194  Check:  1082  Weight:  1.00
 Name: ENSP00000416658/1-194     Len:    194  Check:  8706  Weight:  1.00
 Name: ENSBTAP00000003935/1-186  Len:    194  Check:  8410  Weight:  1.00
 Name: bmy_05971T0/1-170         Len:    194  Check:  5382  Weight:  1.00
 Name: BACU002423/1-186          Len:    194  Check:  7620  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000016412/1-194  IAQNLAREMT SILRSPQALQ LTLALIKPDA VAHPLILEXX XXXXXXXXXX 
ENSP00000416658/1-194     MTQNLGSEMA SILRSPQALQ LTLALIKPDA VAHPLILEAV HQQILSNKFL 
ENSBTAP00000003935/1-186  --------MT SILRSPQALQ LTLALIKPDA VAHPLILEAV HQQILSNKFL 
bmy_05971T0/1-170         --------MT SILRSPQALQ LTLALIKPDA VAHPLILEAV HQQILSNKFL 
BACU002423/1-186          --------MT SILRSPQALQ LTLALIKPDA VAHPLILEAV HQQILSNKFL 


                          51                                                 100
ENSTTRP00000016412/1-194  XXXXXXXXXX XXXXXXXXXX XXXRFFYQRL VEFMASGPIR AYILAHKDAI 
ENSP00000416658/1-194     IVRMRELLWR KEDCQRFYRE HEGRFFYQRL VEFMASGPIR AYILAHKDAI 
ENSBTAP00000003935/1-186  IVRMRELLWR KEDCQKFYRE HEGRFFYQRL VEFMASGPIR AYILAHKDAI 
bmy_05971T0/1-170         IVRMRELLWR KEDCQKFYQE HEGRFFYQRL VEFMASGPIR AYILAHKDAI 
BACU002423/1-186          IVRMRELLWR KEDCQKFYQE HEGRFFYQRL VEFMASGPIR AYILAHKDAI 


                          101                                                150
ENSTTRP00000016412/1-194  QLWRTVMGPT RVFRARHVAP DSIRGSFGLT DTRNTTHGSD SVVSASREIA 
ENSP00000416658/1-194     QLWRTLMGPT RVFRARHVAP DSIRGSFGLT DTRNTTHGSD SVVSASREIA 
ENSBTAP00000003935/1-186  QLWRTVMGPT RVFRARHVAP DSIRGSFGLT DTRNTTHGSD SVVSASREIA 
bmy_05971T0/1-170         QLWRTVMGPT RVFRARHMAP DSIH------ ---------- SAVSASREIA 
BACU002423/1-186          QLWRTVMGPT RVFRAHHVAP DSIRGSFGLT DTRNTTHGSD SVVSASREIA 


                          151                                                200
ENSTTRP00000016412/1-194  AFFPDFSEQR WYEEEEPQLR CGPVRYNPEG GIHFAAGTGG PGPT 
ENSP00000416658/1-194     AFFPDFSEQR WYEEEEPQLR CGPVCYSPEG GVHYVAGTGG LGPA 
ENSBTAP00000003935/1-186  AFFPDFSEQR WYEEEEPQLR CGPVHYSPEG GIHFAAPSGG LGPA 
bmy_05971T0/1-170         AFFPDFSEQR WYEEEEPQLR CGPVRYNPEG GIHFAAGTGG PGPT 
BACU002423/1-186          AFFPDFSEQR WYEEEEPQLR CGPVCYNPEG GIHFAAGTGG PGPT