KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:37 2014 Check: 00 .. Name: bmy_20337T0/1-332 Len: 843 Check: 9099 Weight: 1.00 Name: ENSTTRP00000010513/1-406 Len: 843 Check: 7902 Weight: 1.00 Name: BACU011263/1-843 Len: 843 Check: 2102 Weight: 1.00 Name: ENSBTAP00000003974/1-407 Len: 843 Check: 6542 Weight: 1.00 // 1 50 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 MNGEEEFFDA VTEANQRVTG VIHVDTSKSN GIGKVGERPP QENGIQKHRT ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 SLPAPMFTRS DFSVWSILKK CIGLELSKIT MPIAFNEPLS FLQRITEYME ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 HVYLVHKASC QPQPLERMQS VAAFAVSAVA SQWERTGKPF NPLLGETYEL ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 TREDLGFRFI SEQVSHHPPV SAFYSEGLHQ DFLFHGSIYP KLKFWGXXXX ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 XAEPRGTITL ELLKHNEAYT WTNPTCCVHN VIIGKLWIEQ YGTVEIVNHR ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 TGDKCVLHFK PCGLFGKELH RVEGYIQDKN KKKLFMIYGK WTECLWGLDP ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 AAYESFKKQE RRTDSLRKTK LDDCPEKADG DVVDAVPEAQ ETVQVIPGSK ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_20337T0/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010513/1-406 ---------- ---------- ---------- ---------- ---------- BACU011263/1-843 LLWRVNTRPP NSAQMYNFTS FTVSLNELET GMEKILAPTD CRLRPDIRGM ENSBTAP00000003974/1-407 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_20337T0/1-332 ---------- ---------- ---------- ------MTTS GALFPSLVPG ENSTTRP00000010513/1-406 ---------- ---------- ---------- ------MTTS GALFPSLVPG BACU011263/1-843 ENGNMDLASQ EKERLEEKQR EARRERAREE AEWQTRMTTS GALFPSLVPG ENSBTAP00000003974/1-407 ---------- ---------- ---------- ------MTTS GALFPSLVPG 451 500 bmy_20337T0/1-332 SRGSSNKYLV EFRAGKMSLK GTTVTPDKRK GLVYIQQTDD SLIHFCWKDR ENSTTRP00000010513/1-406 SRGSSNKYLV EFRAGKMSLK GTTVTPDKRK GLVYIQQTDD SLIHFCWKDR BACU011263/1-843 SRGSSNKYLV EFRAGKMSLK GTTVTPDKRK GLVYIQQTDD SLIHFCWKDR ENSBTAP00000003974/1-407 SRGSSNKYLV EFRAGKMSLK GTTVTPDKRK GLVYIQQTDD SLIHFCWKDR 501 550 bmy_20337T0/1-332 TSGNVEDDLI IFPDDCEFKR VPQCPSGRVY VLKFKAGSKR LFFWMQEPKT ENSTTRP00000010513/1-406 TSGNVEDDLI IFPDDCEFKR VPQCPSGRVY VLKFKAGSKR LFFWMQEPKT BACU011263/1-843 TSGNVEDDLI IFPDDCEFKR VPQCPSGRVY VLKFKAGSKR LFFWMQEPKT ENSBTAP00000003974/1-407 TSGNVEDDLI IFPDDCEFKR VPQCPSGRVY VLKFKAGSKR LFFWMQEPKT 551 600 bmy_20337T0/1-332 DQDEEHCRKV NEYLNNPPMP GALGASGSGG HELSALGG-- ---------- ENSTTRP00000010513/1-406 DQDEEHCRKV NEYLNNPPMP GALGASGSAG HELSALGGE- GLQSLLGNMS BACU011263/1-843 DQDEEHCRKV NEYLNNPPMP GALGASGSGG HELSALGGEG GLQSLLGNMS ENSBTAP00000003974/1-407 DQDEEHCRKV NEYLNNPPMP GALGASGSGG HELSALGGEG GLQSLLGNMS 601 650 bmy_20337T0/1-332 ---------- -------GLG ALTGPGLASL LGSGGPPASS SSSSSRSQSA ENSTTRP00000010513/1-406 HSQLMQLIGP AGLGGLGGLG ALTGPGLASL LGSGGPPASS SSPSSRSPSA BACU011263/1-843 HSQLMQLIGP AGLGGLGGLG ALTGPGLASL LGSGGPPASS SSSSSRSQSA ENSBTAP00000003974/1-407 HSQLMQLIGP AGLGGLGGLG ALTGPGLASL LGSGGPPASS SSSSSRSQSA 651 700 bmy_20337T0/1-332 AVTPSSTTSS TRATPAPSAP AAASTTSPSP APSSGNGTST AASPTQPIQL ENSTTRP00000010513/1-406 AVTPSSTAPS TRTTPAPSAP AAASVSSPSP APSPGNGAST AASPTQPIQL BACU011263/1-843 AVTPSSTTSS TRATPAPSAP AAASTTSPSP APSSGNGTST AASPTQPIQL ENSBTAP00000003974/1-407 AVTPSSTTSS TRATPAPSAP AAASATSPSP APSSGDGAST AASPAQPIQL 701 750 bmy_20337T0/1-332 SDLQSILATM NVPAGPGGGQ QGNTCSS--- ---AP---GW GVKAPAAPCP ENSTTRP00000010513/1-406 SDLQSILATM NVPAGPGGGQ QVDLASVLTP EIMAPILANA DVQERLLPYL BACU011263/1-843 SDLQSILATM NVPAGPGGGQ QVDLASVLTP EIMAPILANA DVQERLLPYL ENSBTAP00000003974/1-407 SDLQSILATM SVPAGPGGGQ QVDLASVLTP EIMAPILANA DVQERLLPYL 751 800 bmy_20337T0/1-332 PAG------- ---------- --------FP RHGSKHVPGP SCCPARVASS ENSTTRP00000010513/1-406 PSGESLPQTA EEIQNTLTSP QFQQALGMFS AALASGQLGP LMCQFGLPAE BACU011263/1-843 PSGESLPQTA EEIQNTLTSP QFQQALGMFS AALASGQLGP LMCQFGLPAE ENSBTAP00000003974/1-407 PSGESLPQTA EEIQNTLTSP QFQQALGMFS AALASGQLGP LMCQFGLPAE 801 850 bmy_20337T0/1-332 SPHLASP--C PAVLQLGVCH CPPEWASGLA PSR------- --- ENSTTRP00000010513/1-406 AVEAANKGDV EAFAKAMQSS ASPEQQEGGG QDRKDEEEDM SLD BACU011263/1-843 AVEAANKGDV EAFAKAMQNS ASPEQQEGDG KGKKEEEEDM SLD ENSBTAP00000003974/1-407 AVEAANKGDV EAFAKAMQNS ASPEQQEGDG KDKKDEEEDM SLD