KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:37 2014 Check: 00 .. Name: ENSP00000446874/1-297 Len: 453 Check: 4157 Weight: 1.00 Name: ENSTTRP00000002069/1-290 Len: 453 Check: 7727 Weight: 1.00 Name: bmy_01199T0/1-434 Len: 453 Check: 7642 Weight: 1.00 Name: ENSBTAP00000003977/1-290 Len: 453 Check: 7116 Weight: 1.00 // 1 50 ENSP00000446874/1-297 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002069/1-290 ---------- ---------- ---------- ---------- ---------- bmy_01199T0/1-434 ASAPLRRLVC LRVAPTTAAS GSRARRIRFG GCGWAPEALP DWVDRCSAAP ENSBTAP00000003977/1-290 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000446874/1-297 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002069/1-290 ---------- ---------- ---------- ---------- ---------- bmy_01199T0/1-434 APGSGGRGLR ATELPQPRGL TLSCGPQTVS LLLLATATSG SECSSPSNAS ENSBTAP00000003977/1-290 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000446874/1-297 ---------- ---------- ---------- -----MVLLH VKRGDESQFL ENSTTRP00000002069/1-290 ---------- ---------- ---------- -----MVLLH VKRGDESQFL bmy_01199T0/1-434 PGGPGFRLPA AVGRSSLFAA HPEPSRRLGG TSGATMVLLH VKRGDESQFL ENSBTAP00000003977/1-290 ---------- ---------- ---------- -----MVLLH VKRGDESQFL 151 200 ENSP00000446874/1-297 LQAPGSTELE ELTVQVARVY NGRLKVQRLC SEMEELAEHG IFLPPNMQGL ENSTTRP00000002069/1-290 LHAPGSTXXX XXXXXXXXXX XXXXXXXXXX XXMEELAEHG VFLPPNMQGL bmy_01199T0/1-434 LQAPGSTELE ELTVQVARVY NARLKVQRVC SEMEELAEHG VLLPPDMQGL ENSBTAP00000003977/1-290 LQAPGSSELE ELTAQVARVY NARLKAQRIW SEMEELAEHG VFLPPNMQGL 201 250 ENSP00000446874/1-297 TDDQIEELKL KDEWGEKCVP SGGAVFKKDD IGRRNGQAPN EKMKQVLKKT ENSTTRP00000002069/1-290 TDDQIEDLKL KDEWGEKCVP SAGSVFKKDD IGRTNGQAPN EKMKQVLKKT bmy_01199T0/1-434 TDDQIEDLKL KDEWGEKCVP SAGSVFKKDD IGRRNGQAPN EKMKQVLKKT ENSBTAP00000003977/1-290 TDEQIEELKL KDEWGEKCIP SGGSVFKKDD IGRRNGQAPN EKMKQVIKKT 251 300 ENSP00000446874/1-297 IEEAKAIISK KQVEAGVCVT MEMVKDALDQ LRGAVMIVYP MGLPPYDPIR ENSTTRP00000002069/1-290 IEEAKAIISK KHVEANVCVT MEMVKDALDQ LRGAVMIVYP MGLPPYDPIR bmy_01199T0/1-434 IEEAKAIISK KHVEANVCVT MEMVKDALDQ LRGAVMIVYP MGLPPYDPIR ENSBTAP00000003977/1-290 IEEAKAIISK KQVEANVCMT MEMVNDALDQ LRGAVMIVYP MGLPPYDPIR 301 350 ENSP00000446874/1-297 MEFENKEDLS GT-------- -QAGLNVIKE AEAQLWWAAK ELRRTKKLSD ENSTTRP00000002069/1-290 MEFENKEDLS GS-------- -QAALSVISE SEAQLWWAAK ELRRTKKLSD bmy_01199T0/1-434 MEFENKEDLS GSQVXGSWGF FQAALSVITE SEAQLWWAAK ELRRTKKLSD ENSBTAP00000003977/1-290 MEFENKEDLS GT-------- -QAGLNVIKE SEAQLWWAAK ELRRTKKLSD 351 400 ENSP00000446874/1-297 YVGKNEKTKI IAKIQQ---- -PLQQQIIRL HQE------- LGRQKSLWAD ENSTTRP00000002069/1-290 YVGKNEKTKI IVKIQRRGQG APAREPIISS EEQKQLMLFY HRRQEELKKL bmy_01199T0/1-434 YVGKNEKTKI IVKIQRRGQG APAREPVISS EEQKRLVLYY HRRQEELKKL ENSBTAP00000003977/1-290 YVGKNEKTKI IVKIQHRGQG APAREPIISS EEQKQLMLYY HRRQEELKKL 401 450 ENSP00000446874/1-297 VHGKLRSHID ALREQNMELR EKLRALQLQR WKARKKSAAS PHAGQESHTL ENSTTRP00000002069/1-290 EENDDDSCLN SPWADNTALK RHFHGVKDIK WRPR------ ---------- bmy_01199T0/1-434 EENDDDSCLN SPWADNTALK RHFHGVKDIK WRPR------ ---------- ENSBTAP00000003977/1-290 EENDDDSCLN SPWADNTALK RHFHGVKDIK WRPR------ ---------- 451 500 ENSP00000446874/1-297 ALE ENSTTRP00000002069/1-290 --- bmy_01199T0/1-434 --- ENSBTAP00000003977/1-290 ---