KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:40 2014 Check: 00 .. Name: ENSTTRP00000004917/1-260 Len: 260 Check: 5282 Weight: 1.00 Name: bmy_11584T0/1-181 Len: 260 Check: 1063 Weight: 1.00 Name: ENSP00000296802/1-260 Len: 260 Check: 6043 Weight: 1.00 Name: BACU006190/1-260 Len: 260 Check: 5695 Weight: 1.00 Name: ENSBTAP00000003989/1-260 Len: 260 Check: 5695 Weight: 1.00 // 1 50 ENSTTRP00000004917/1-260 MPQNEYIELH RKRYGYRLDY HEKKRKKEGR EAHERSKKAK KMIGLKAKLY bmy_11584T0/1-181 MPQNEYIELH RKRYGYRLDY HEKKRKKEGR EAHERSKKAK KMIGLKAKLY ENSP00000296802/1-260 MPQNEYIELH RKRYGYRLDY HEKKRKKESR EAHERSKKAK KMIGLKAKLY BACU006190/1-260 MPQNEYIELH RKRYGYRLDY HEKKRKKEGR EAHERSKKAK KMIGLKAKLY ENSBTAP00000003989/1-260 MPQNEYIELH RKRYGYRLDY HEKKRKKEGR EAHERSKKAK KMIGLKAKLY 51 100 ENSTTRP00000004917/1-260 HKQRHAEKIQ MKKTIKMHEK RNTKQKNDEK TPQGAVPAYL LDREGQSRAK bmy_11584T0/1-181 HKQRHAEKIQ MKKTIKMHEK RNTKQKNDEK TPQGAVPAYL LDREGQSRAK ENSP00000296802/1-260 HKQRHAEKIQ MKKTIKMHEK RNTKQKNDEK TPQGAVPAYL LDREGQSRAK BACU006190/1-260 HKQRHAEKIQ MKKTIKMHEK RNTKQKNDEK TPQGAVPAYL LDREGQSRAK ENSBTAP00000003989/1-260 HKQRHAEKIQ MKKTIKMHEK RNTKQKNDEK TPQGAVPAYL LDREGQSRAK 101 150 ENSTTRP00000004917/1-260 VLSNMIKQKR KEKAXXXXXX XXKVRAQGET EVLKVIRTGK RKKKAWKRMV bmy_11584T0/1-181 VLSNMIKQKR KEKAGKWEVP LPKVRAQGET EVLKVIRTGK RKKKAWKRMV ENSP00000296802/1-260 VLSNMIKQKR KEKAGKWEVP LPKVRAQGET EVLKVIRTGK RKKKAWKRMV BACU006190/1-260 VLSNMIKQKR KEKAGKWEVP LPKVRAQGET EVLKVIRTGK RKKKAWKRMV ENSBTAP00000003989/1-260 VLSNMIKQKR KEKAGKWEVP LPKVRAQGET EVLKVIRTGK RKKKAWKRMV 151 200 ENSTTRP00000004917/1-260 TKVCFVGDGF TRKPPKYERF IRPMGLRFKK AHVTHPELKA TFCLPILGVK bmy_11584T0/1-181 TKVCFVGDGF TRKPPKYERF IRPMSF---- ---------- ------YSLN ENSP00000296802/1-260 TKVCFVGDGF TRKPPKYERF IRPMGLRFKK AHVTHPELKA TFCLPILGVK BACU006190/1-260 TKVCFVGDGF TRKPPKYERF IRPMGLRFKK AHVTHPELKA TFCLPILGVK ENSBTAP00000003989/1-260 TKVCFVGDGF TRKPPKYERF IRPMGLRFKK AHVTHPELKA TFCLPILGVK 201 250 ENSTTRP00000004917/1-260 KNPSSPLYTA LGVITKGTVI EVNVSELGLV TQGGKVIWGK YAQVTNNPEN bmy_11584T0/1-181 K--------- ---------- ---------- ---------- ---------- ENSP00000296802/1-260 KNPSSPLYTT LGVITKGTVI EVNVSELGLV TQGGKVIWGK YAQVTNNPEN BACU006190/1-260 KNPSSPLYTT LGVITKGTVI EVNVSELGLV TQGGKVIWGK YAQVTNNPEN ENSBTAP00000003989/1-260 KNPSSPLYTT LGVITKGTVI EVNVSELGLV TQGGKVIWGK YAQVTNNPEN 251 300 ENSTTRP00000004917/1-260 DGCINAVLLV bmy_11584T0/1-181 ---------- ENSP00000296802/1-260 DGCINAVLLV BACU006190/1-260 DGCINAVLLV ENSBTAP00000003989/1-260 DGCINAVLLV