KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:43 2014 Check: 00 .. Name: ENSP00000326858/1-455 Len: 462 Check: 6434 Weight: 1.00 Name: ENSBTAP00000004003/1-452 Len: 462 Check: 9232 Weight: 1.00 Name: ENSTTRP00000014420/1-304 Len: 462 Check: 3475 Weight: 1.00 Name: BACU007889/1-360 Len: 462 Check: 1348 Weight: 1.00 Name: bmy_06855T0/1-244 Len: 462 Check: 5844 Weight: 1.00 // 1 50 ENSP00000326858/1-455 MAQHFSLAAC DVVGFDLDHT LCRYNLPESA PLIYNSFAQF LVKEKGYDKE ENSBTAP00000004003/1-452 MAQHFSLAAC DVVGFDLDHT LCCYNLPESA RLIYNSFAQF LVKEKGYDKG ENSTTRP00000014420/1-304 ---------- ---------- ---------- ---------- ---------- BACU007889/1-360 ---------- ---------- ---------- ---------- ---------- bmy_06855T0/1-244 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000326858/1-455 LLNVTPEDWD FCCKGLALDL EDGNFLKLAN NGTVLRASHG TKMMTPEVLA ENSBTAP00000004003/1-452 LLTVTPEDWD FCCKGLALDL EDGNFIKLAD NGTVLRASHG TKMLSAEALA ENSTTRP00000014420/1-304 ---------- ---------- ---------- ---------- ---------- BACU007889/1-360 ---------- ---------- ---------- ---------- --MLAPEVLA bmy_06855T0/1-244 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000326858/1-455 EAYGKKEWKH FLSDTGMACR SGKYYFYDNY FDLPGALLCA RVVDYLTKLN ENSBTAP00000004003/1-452 EEFGRKEWKH FMPDTGMAFR SGKYYFYDNY FDLPGALLCA RVVDSLTKQN ENSTTRP00000014420/1-304 ---------- ---------- ---------- ---------- --------QN BACU007889/1-360 EEYGRKGWKR FMPDLGMACR SKKYYFYDNY FDLPGALLCA RVVDSLTKQN bmy_06855T0/1-244 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000326858/1-455 NGQKTFDFWK DIVAAIQHNY KMSAFKENCG IYFPEIKRDP GRYLHSCPES ENSBTAP00000004003/1-452 NGQKPFDFWK DIVAGIQHNY KMSAFKENCG IYFPEIKRDP GKYLHTCPES ENSTTRP00000014420/1-304 NGQKPFDFWK DIVAGIQHNY KMSAFKXXXX XXXXXXXXDP GRYLHTCPES BACU007889/1-360 NGQKPFDFWK DIVAGIQHNY KMSAFKENCG IYFPEIKRDP GRYLHTCPES bmy_06855T0/1-244 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000326858/1-455 VKKWLRQLKN AGKILLLITS SHSDYCRLLC EYILGNDFTD LFDIVITNAL ENSBTAP00000004003/1-452 VKKWLRQLKN AGKILMLITS SHSDYCRLLC QYILGNDFED LFDIVITNAL ENSTTRP00000014420/1-304 VKKWLRQLKN AGKILMLITS SHSDYCRLLC EYILGNDFEY LFDIVITNAL BACU007889/1-360 VKKWLRQLKN AGKILMLITS SHSDYCRLLC EYILGNDFEY LFDIVITNAL bmy_06855T0/1-244 ---------- -----MLITS SHSDYCRLLC EYILGNDFEY LFDIVITNAL 251 300 ENSP00000326858/1-455 KPGFFSHLPS QRPFRTLEND EEQEALPSLD KPGWYSQGNA VHLYELLKKM ENSBTAP00000004003/1-452 KPGFFSHLPS QRPFRTLEND EEREALPFLD KPGWYSQGNA VHLYELLKKM ENSTTRP00000014420/1-304 KPGFFSHLPS QRPFRTLEND EEQEALPSLD KPGWYSQGNA VHLYELLKKM BACU007889/1-360 KPGFFSHLPS QRPFRTLEND AEQEALPSLD KPGWYSQGNA VHLYELLKKM bmy_06855T0/1-244 KPGFFSHLPS QRPFRTLEND EEQEALPSLD KPGWYSQGNA VHLYELLKKM 301 350 ENSP00000326858/1-455 TGKPEPK--- ----VVYFGD SMHSDIFPAR HYSNWETVLI LEELRGDEGT ENSBTAP00000004003/1-452 TGKPEPK--- ----VVYFGD SMHSDIFPAC HYSNWETVLI LEELRGD--- ENSTTRP00000014420/1-304 TGKPEPK--- ----VVYFGD SMHSDIFPAC HYSNWETVLI LEELRGD--- BACU007889/1-360 TGKPEPK--- ----VVYFGD SMHSDIFPAC HYSNWETVLI LEELRGD--- bmy_06855T0/1-244 TGKPEPKNLL SDLQVVYFGD SMHSDIFPAC HYSNWETVLI LEELRGD--- 351 400 ENSP00000326858/1-455 RSQRPEESEP LEKKGKYEGP KAKPLNTSSK KWGSFFIDSV LGLENTEDSL ENSBTAP00000004003/1-452 KDGKPEESEP EEKKGKYEGS KAKPLNTSSK KWGSFFIDSV SGLENREDSL ENSTTRP00000014420/1-304 RDGKPEDSEP LEKKGKYEGL KAKPLNRLSK KWGSFFIDSV SGLENTEDSL BACU007889/1-360 RDGRPEDSEP LEKKGKYEGP KAKPLNRLSK KWGSFFIDSV SGLENTEDSL bmy_06855T0/1-244 RDXKPEDSEP LEKKGKYEGP KAKPLNRLSK KWGSFFIDSV SGLENTEDSL 401 450 ENSP00000326858/1-455 VYTWSCKRIS TYSTIAIPSI EAIAELPLDY KFTRFSSSNS KTAGYYPNPP ENSBTAP00000004003/1-452 VYTWSCKRIS AYSTIAIPSI EAIAELPLDY KFTRFSSNNS KTAGYYPNPP ENSTTRP00000014420/1-304 IYTWSCKRIS TYSTIAIPSI EAIAELPLDY KFTSFSSNNS KTAGYYPNPP BACU007889/1-360 VYTCSCKRIS AYSTIAIPSI EAIAELPLDY KFTSFSSNNS KTAGYYPNPP bmy_06855T0/1-244 VYTWSCKRIS AYSTIAIPSI EAIAELPLDY KFTSFSSNNS KTAGYYPNPP 451 500 ENSP00000326858/1-455 LVLSSDETLI SK ENSBTAP00000004003/1-452 LVLSNAGKLT AK ENSTTRP00000014420/1-304 LVLSNDGKLT TK BACU007889/1-360 LVLSNDGKLT TK bmy_06855T0/1-244 LVLSNDGKLT TK