KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:44 2014 Check: 00 .. Name: BACU007173/1-251 Len: 259 Check: 8860 Weight: 1.00 Name: bmy_13286T0/1-196 Len: 259 Check: 3345 Weight: 1.00 Name: ENSBTAP00000004009/1-188 Len: 259 Check: 8458 Weight: 1.00 Name: ENSP00000388920/1-188 Len: 259 Check: 8072 Weight: 1.00 Name: ENSTTRP00000006259/1-172 Len: 259 Check: 703 Weight: 1.00 // 1 50 BACU007173/1-251 MSANEDQEME LEALRSIYEG DESFRELSPV SFQYRIGENG DPKAFLIEIS bmy_13286T0/1-196 MSANEDQEME LEALRSIYEG DESFRELRPV SFQYRIGENS DPKAFLIEIS ENSBTAP00000004009/1-188 MGANEDQEME LEALRSIYEG DESFRELSPV SFQYRIGENG DPKAFLIEIS ENSP00000388920/1-188 MSANEDQEME LEALRSIYEG DESFRELSPV SFQYRIGENG DPKAFLIEIS ENSTTRP00000006259/1-172 MSANEDQEME LEALRSIYEG DESFRELSPV SFQYRIGENG DPKAFLIEIS 51 100 BACU007173/1-251 WTETYPQTPP IISMNAFFNN TI-------- SSAVKQSILA KLQEAVEVNL bmy_13286T0/1-196 WTETYPQTPP IISMNAFLNN TINVFLVHCR SSAVKQSILA KLQEAVEVNL ENSBTAP00000004009/1-188 WTETYPQTPP IISMNAFFNN TI-------- SSDVKQSILA KLQEAVEVHL ENSP00000388920/1-188 WTETYPQTPP ILSMNAFFNN TI-------- SSAVKQSILA KLQEAVEANL ENSTTRP00000006259/1-172 WTETYPQTPP IISMNAFFNN TI-------- SSAVKQSILA KLQEAVEVNL 101 150 BACU007173/1-251 GTAMTYTLFE YAKDNKERLM ENHRPVCSAT SISNSISVET PNTAPSSKKK bmy_13286T0/1-196 GTAMTYTLFE YAKENKEQFM ENHHPVHSAT SISNIISVET PNTAPSSKKK ENSBTAP00000004009/1-188 GTAMTYTLFE YAKDNKEQFM ENHHPVHSAT SISNIISAET PNTAPSSKKK ENSP00000388920/1-188 GTAMTYTLFE YAKDNKEQFM ENHNPINSAT SISNIISIET PNTAPSSKKK ENSTTRP00000006259/1-172 GTAMTYTXFK ---------- ------NNDA SISNIISVET PNTAPSSKKK 151 200 BACU007173/1-251 DKKEQLSKAQ KRKLADKTDH KGELPRGWNW VDVVKVCNIY IPVFKKLLQL bmy_13286T0/1-196 DKKEQLSKAQ THKLADKTDH KGELPRGWNW VDVVK----- ---------- ENSBTAP00000004009/1-188 DKKEQLSKAQ KRKLADKTDH KGELPRGWNW VDVVK----- ---------- ENSP00000388920/1-188 DKKEQLSKAQ KRKLADKTDH KGELPRGWNW VDVVK----- ---------- ENSTTRP00000006259/1-172 DKKEQLSKAQ KRKLADKTDH KGELPRGWNW VDVVK----- ---------- 201 250 BACU007173/1-251 LPSSNEIYIF HFLPFNLWIL LGYLLFHVQH VSIXXXXXXX XXXXXXSVLG bmy_13286T0/1-196 ---------- ---------- ---------H LSKTGSKDDE ---------- ENSBTAP00000004009/1-188 ---------- ---------- ---------H LSKTGSKDDE ---------- ENSP00000388920/1-188 ---------- ---------- ---------H LSKTGSKDDE ---------- ENSTTRP00000006259/1-172 ---------- ---------- ---------H LSKTGSKDDE ---------- 251 300 BACU007173/1-251 FLFLIMENL bmy_13286T0/1-196 --------- ENSBTAP00000004009/1-188 --------- ENSP00000388920/1-188 --------- ENSTTRP00000006259/1-172 ---------