KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:45 2014 Check: 00 .. Name: ENSP00000367882/1-420 Len: 420 Check: 1678 Weight: 1.00 Name: ENSTTRP00000013309/1-418 Len: 420 Check: 6906 Weight: 1.00 Name: ENSBTAP00000004019/1-420 Len: 420 Check: 9495 Weight: 1.00 Name: bmy_15630T0/1-247 Len: 420 Check: 398 Weight: 1.00 Name: BACU010591/1-231 Len: 420 Check: 2769 Weight: 1.00 // 1 50 ENSP00000367882/1-420 MDTKRCFANR FDDYQGSLLA GQCEEAVAPL VTATIERILQ ELPPLGGGAE ENSTTRP00000013309/1-418 MDTKRCFANR FDDYQGSLLA GQCEEAVAPL VTATIERILQ ELPPLGGGAE ENSBTAP00000004019/1-420 MDTKRCFANR FDDYQGSLLA GQCEEAVAPL VTATIERILQ ELPPLGGGPE bmy_15630T0/1-247 ---------- ---------- ---------- ---------- ---------- BACU010591/1-231 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367882/1-420 ARGATAGASA CQGGLYGGVA GVAYMLYHVS QSPLFATARE RYLRSAKRLI ENSTTRP00000013309/1-418 GRGAAAAASS CQGGLYGGVA GVAYMLYHVS QSPLFAAARE RYLRSAKRLI ENSBTAP00000004019/1-420 GRGAAAAASS CQWGLYGGVA GVAYMLYHVS QSPLFAGARE RYLRLAKRLI bmy_15630T0/1-247 ---------- ---------- ---------- ---------- -MLSVANEIL BACU010591/1-231 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000367882/1-420 DACARAEEWG EPDADTRAAF LLGGAGVYAV ATLVYHALGR SDYVQPLGKF ENSTTRP00000013309/1-418 DACARAEEWG EPDADTRAAF LLGGAGVYAV ATLVYHALGR SDYVQPLGKF ENSBTAP00000004019/1-420 DACARAEEWG EPDADTRAAF LLGGAGVYAV ATLVYHALGR PDYVQPLGKF bmy_15630T0/1-247 RG-------- ---------- ---------- --------DK LDNEERISGF BACU010591/1-231 -------MW- ---------- ---------- ---------- ---------- 151 200 ENSP00000367882/1-420 RALCAVCAPV SFLECGSDEL FVGRAGYLCA ALVLKQKLAQ EVLTPAQIKS ENSTTRP00000013309/1-418 RSLCAVCAPV SFLECGSDEL FVGRAGYLCA ALVLKQKLAQ EVLTPAQIKS ENSBTAP00000004019/1-420 RALCAVCAPV SFLECGSDEL FVGRAGYLCA ALVLKQKLAQ EVLTPAQIKS bmy_15630T0/1-247 K--------- ---------- ---------- ---------K KVLTPAQIKS BACU010591/1-231 ---------- ---------- ---------- ---------- -VLTPAQIKS 201 250 ENSP00000367882/1-420 ICQAILDSGK QYAIKKRKPF PLMYSYYGTE YLGAAHGLSS ILQMLLSYHE ENSTTRP00000013309/1-418 ICQAILDSGK QYAMKKRKPF PLMYSYYGTE YLGAAHGLSS ILQMLLSYHE ENSBTAP00000004019/1-420 ICQAILDSGK QYAMKKRKPF PLMYSYYGTE YLGAAHGLSS ILQMLLSYHE bmy_15630T0/1-247 ICQAILDSGK QYAMKKRKPF PLMYSYYGTE YLGAAHGLSS ILQMLLSYHE BACU010591/1-231 ICQAILDSGK QYAMKKRKPF PLMYSYYGTE YLGAAHGLSS ILQMLLSYHE 251 300 ENSP00000367882/1-420 HLKPSDRELV WQSVDFLMEQ EQNCNWPPEL GETIERENEL VHWCHGAPGI ENSTTRP00000013309/1-418 HLKPSDQELV WQSVD-LMEQ EQNCNWPPEL GEAIERENEL VHWCHGAPGI ENSBTAP00000004019/1-420 HLKPSDQELV WQSVDFLMEQ EQNCNWPPEL GEAIERENEL VHWCHGAPGI bmy_15630T0/1-247 HLKPSDQELV WQSVDFLMEQ EQNCNWPPEL GEAIERENEL VHWCHGAP-- BACU010591/1-231 HLKPSDQELV WQSVDFLMEQ EQNCNWPPEL GEAIERENEL VHWCHGAPGI 301 350 ENSP00000367882/1-420 AYLFAKAYLV SKKPQYLDTC IRCGELTWQK GLLKKGPGIC HGVAGSAYVF ENSTTRP00000013309/1-418 AYLFAKAYLV SKKPQYLDTC IRCGELTWQK GLLKKGPGIC HGVAGSAYVF ENSBTAP00000004019/1-420 AYLFAKAYLV SKKPQYLDTC IRCGELTWQK GLLKKGPGIC HGVAGSAYVF bmy_15630T0/1-247 ------AYLV SKKPQYLDTC IRCGELTWQK GLLKKGPGIC HGVAGSAYVF BACU010591/1-231 AYLFAKAYLV SKKPQYLDTC IRCGELTWQK GLLKKGPGIC HGVAGSAYVF 351 400 ENSP00000367882/1-420 LLLYRLTGNS KYIYRAQRFA QFLFTEEFKA GSRVLESIYS LYEGFSGTVC ENSTTRP00000013309/1-418 LLLYRLTGNS KYIYRAQRFA -FLFTEEFKA GSRVLESIYS LYEGFSGTVC ENSBTAP00000004019/1-420 LLLYRLTGNS KYIYRAQRFA EFLFTEEFKA GSRVLESIYS LYEGFSGTVC bmy_15630T0/1-247 LLLYRLTGNS KYIYRAQRFA EFLFTEEFKA GSRVLESIYS LYEGFSGTVC BACU010591/1-231 LLLYRLTGNS KYIYRAQRFA EFLFTEEFKA GSRVLESIYS LYEGFSGTVC 401 450 ENSP00000367882/1-420 FLIDLLQPNQ AEFPLFSVFV ENSTTRP00000013309/1-418 FLIDLLQPNQ AEFPLFSVFV ENSBTAP00000004019/1-420 FLIDLLQPNQ AEFPLFSVFV bmy_15630T0/1-247 FLIDLLQPNQ AEFPLFSVFV BACU010591/1-231 FLIDLLQPNQ AEFPLFSVFV