KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:46 2014 Check: 00 .. Name: ENSP00000261819/1-755 Len: 797 Check: 1689 Weight: 1.00 Name: ENSBTAP00000004025/1-755 Len: 797 Check: 9021 Weight: 1.00 Name: ENSTTRP00000013546/1-754 Len: 797 Check: 7604 Weight: 1.00 Name: bmy_01432T0/1-769 Len: 797 Check: 5013 Weight: 1.00 Name: BACU013624/1-755 Len: 797 Check: 201 Weight: 1.00 // 1 50 ENSP00000261819/1-755 MASVHESLYF NPMMTNGVVH ANVFGIKDWV TPYKIAVLVL LNEMSRTGEG ENSBTAP00000004025/1-755 MASVHESLYF NPMMTNGVVH ANVFGIKDWV TPYKIAVLVL LNEMGRTGEG ENSTTRP00000013546/1-754 MASVHESLYF NPMMTNGVVH ANVFGIKDWV TPYKIAVLVL LNEMGRTGEG bmy_01432T0/1-769 MASVHESLYF NPMMTNGVVH ANVFGIKDWV TPYKIAVLVL LNEMGRTGEG BACU013624/1-755 MASVHESLYF NPMMTNGVVH ANVFGIKDWV TPYKIAVLVL LNEMGRTGEG 51 100 ENSP00000261819/1-755 AVSLMERRRL NQLLLPLLQG PDITLSKLYK LIEESCPQLA NSVQIRIKLM ENSBTAP00000004025/1-755 AVSLMERRRL NQLLLPLLQG PDITLSKLYK LIEESCPQLA NSVQIRIKLM ENSTTRP00000013546/1-754 AVSLMERRRL NQLLLPLLQG PDITLSKLYK LIEESCPQLA NSVQIRIKLM bmy_01432T0/1-769 A--------- ---------G PDITLSKLYK LIEESCPQLA NSVQIRIKLM BACU013624/1-755 AVSLMERRRL NQLLLPLLQG PDITLSKLYK LIEESCPQLA NSVQIRIKLM 101 150 ENSP00000261819/1-755 AEGELKDMEQ FFDDLSDSFS GTEPEVHKTS VVGLFLRHMI LAYSKLSFSQ ENSBTAP00000004025/1-755 AEGELKDMEQ FFDDLSDSFS GTEPEVHKTS VVGLFLRHMI LAYSKLSFSQ ENSTTRP00000013546/1-754 AEGELKDMEQ FFDDLSDSFS GTEPEVHKTS VVGLFLRHMI LAYSKLSFSQ bmy_01432T0/1-769 AEGELKDMEQ FFDDLSDSFS GTEPEVHKTS VVGLFLRHMI LAYSKLSFSQ BACU013624/1-755 AEGELKDMEQ FFDDLSDSFS GTEPEVHKTS VVGLFLRHMI LAYSKLSFSQ 151 200 ENSP00000261819/1-755 VFKLYTALQQ YFQNGEKKTV EDADMELTSR DEGERKMEKE ELDVSVREEE ENSBTAP00000004025/1-755 VFKLYTALQQ YFQNGEKKTM EDADMELASR EEGERKMEKE ELDVSIREEE ENSTTRP00000013546/1-754 VFKLYTALQQ YFQNGEKKTV EDADMEPASR EESERKMEKE ELDVSIREEE bmy_01432T0/1-769 VFKLYTALQQ YFQNGEKKTV EDADMELASR EESERKMEKE ELDVSIREEE BACU013624/1-755 VFKLYTALQQ YFQNGEKKTV EDADMELASR EESERKMEKE ELDVSIREEE 201 250 ENSP00000261819/1-755 VSCSGPLSQK QAEFFLSQQA SLLKNDETKA LTPASLQKEL NNLLKFNPDF ENSBTAP00000004025/1-755 VSCSGPLSQK QAEFFLSQQA SLLKNDETKA LTPASLQKEL NNLLKFNPDF ENSTTRP00000013546/1-754 VSCSGPLSQK QAEFFLSQQA SLLKNDETKA LTPASLQKEL NNLLKFNPDF bmy_01432T0/1-769 VSCSGPLSQK QAEFFLSQQA SLLKNDETKA LTPASLQKEL NNLLKFNPDF BACU013624/1-755 VSCSGPLSQK QAEFFLSQQA SLLKNDETKA LTPASLQKEL NNLLKFNPDF 251 300 ENSP00000261819/1-755 AEAHYLSYLN NLRVQDVFSS THSLLHYFDR LILTGAESKS NGEEGYGRSL ENSBTAP00000004025/1-755 AEAHYLSYLN NLRVQDVFSS THSLLHYFDR LILTGAESKS NGEEGYGRSL ENSTTRP00000013546/1-754 AEAHYLSYLN NLRVQDVFSS THSLLHYFDR LILTGAESKS NGEEGYGRSL bmy_01432T0/1-769 AEAHYLSYLN NLRVQDVFSS THSLLHYFDR LILTGAESKS NGEEGYGRSL BACU013624/1-755 AEAHYLSYLN NLRVQDVFSS THSLLHYFDR LILTGAESKS NGEEGYGRSL 301 350 ENSP00000261819/1-755 RYAALNLAAL HCRFGHYQQA ELALQEAIRI AQESNDHVCL QHCLSWLYVL ENSBTAP00000004025/1-755 RYAALNLAAL HCRFGHYQQA ELALQEAIRI AQESNDHVCL QHCLSWLYVL ENSTTRP00000013546/1-754 RYAALNLAAL HCRFGHYQQA ELALQEAIRI AQESNDHVCL QHCLSWLYVL bmy_01432T0/1-769 RYAALNLAAL HCRFGHYQQA ELALQEAIRI AQESNDHVCL QHCLSWLYVL BACU013624/1-755 RYAALNLAAL HCRFGHYQQA ELALQEAIRI AQESNDHVCL QHCLSWLYVL 351 400 ENSP00000261819/1-755 GQKRSDSYVL LEHSVKKAVH FGLPYLASLG IQSLVQQRAF AGKTANKLMD ENSBTAP00000004025/1-755 GQKRSDSYVL LEHSVKKAVH FGLPYLASLG IQSLVQQRAF AGKTANKLMD ENSTTRP00000013546/1-754 GQKRSDSYVL LEHSVKKAVH FGLPYLASLG IQSLVQQRAF AGKTANKLMD bmy_01432T0/1-769 GQKRSDSYVL LEHSVKKAVH FGLPYLASLG IQSLVQQRAF AGKTANKLMD BACU013624/1-755 GQKRSDSYVL LEHSVKKAVH FGLPYLASLG IQSLVQQRAF AGKTANKLMD 401 450 ENSP00000261819/1-755 ALKDSDLLHW KHSLSELIDI SIAQKTAIWR LYGRSTMALQ QAQMLLSMNS ENSBTAP00000004025/1-755 ALKDSDLLHW KHSLSELIDI SIAQKTAIWR LYGRSTMALQ QAQMLLSMNS ENSTTRP00000013546/1-754 ALKDSDLLHW KHSLSELIDI SIAQKTAIWR LYGR-TMALQ QAQLLLSMNS bmy_01432T0/1-769 ALKDSDLLHW KHSLSELIDI SIAQKTAIWR LYGRSTMALQ QAQLLLSMNS BACU013624/1-755 ALKDSDLLHW KHSLSELIDI SIAQKTAIWR LYGRSTMALQ QAQLLLSMNS 451 500 ENSP00000261819/1-755 LEAVNAGVQQ NNTESFAVAL CHLAELHAEQ ---------- -----GCFAA ENSBTAP00000004025/1-755 LESVNAGVQQ NNTESFAVAL CHLAELHAEQ ---------- -----GCFAA ENSTTRP00000013546/1-754 LESVNAGVQQ NNTESFAVAL GHLAELHAEQ ---------- -----GCFAA bmy_01432T0/1-769 LESVNAGVQQ NNTESFAVAL RHLAELHAEQ VGRWAGGRAL CFWSDGCFAA BACU013624/1-755 LESVNAGVQQ NNTESFAVAL CHLAELHAEQ ---------- -----GCFAA 501 550 ENSP00000261819/1-755 ASEVLKHLKE RFPPNSQHAQ LWMLCDQKIQ FDRAMNDGKY HLADSLVTGI ENSBTAP00000004025/1-755 ASEVLKHLKE RFPPNSQHAQ LWMLCDQKIQ FDRAMNDGKY HLADSLVTGI ENSTTRP00000013546/1-754 ASEVLKHLKE RFPPNSQHAQ LWMLCDQKIQ FDRAMNDGKY HLADSIVTGI bmy_01432T0/1-769 ASEVLKHLKE RFPPNSQHA- ---------Q FDRAMNDGKY HLADSIVTGI BACU013624/1-755 ASEVLKHLKE RFPPNSQHAQ LWMLCDQKIQ FDRAMNDGKY HLADSIVTGI 551 600 ENSP00000261819/1-755 TALNSIEGVY R--------- ----KAVVLQ AQNQMSEAHK LLQKLLVHCQ ENSBTAP00000004025/1-755 TALNSIEGVY R--------- ----KAVVLQ AQNQMSEAHK LLQKLLIHCQ ENSTTRP00000013546/1-754 TALNSIEGVY R--------- ----KATVLQ AQNQMSEAHK LLQKLLIHCQ bmy_01432T0/1-769 TALNSIEGVY RPLENTNKLN GESKKAIVLQ AQNQMSEAHK LLQKLLIHCQ BACU013624/1-755 TALNSIEGVY R--------- ----KAIVLQ AQNQMSEAHK LLQKLLIHCQ 601 650 ENSP00000261819/1-755 KLKNTEMVIS VLLSVAELYW RSSSPTIALP MLLQALALSK EYRLQYLASE ENSBTAP00000004025/1-755 RTRNTEMVIS VLLSVAELYW RSSSPTIALP VLLQALALSK EYRLQHLASE ENSTTRP00000013546/1-754 KIRNTEMVIS VLLSVAELYW RSSSPTIALP VLLQALALSK EYRLQHLASE bmy_01432T0/1-769 KIRNTQMVIS VLLSVAELYW RSSSPTIALP VLLQALALSK EYRLQHLASE BACU013624/1-755 KIRNTEMVIS VLLSVAELYW RSSSPTIALP VLLQALALSK EYRLQHLASE 651 700 ENSP00000261819/1-755 TVLNLAFAQL ILGIPEQALS LLHMAIEPIL ADGAILDKGR AMFLVAKCQV ENSBTAP00000004025/1-755 TVLNLAFAQL ILGIPEQALS LLHMAIEPIL ADGAVLDKGR AMFLVAKCQV ENSTTRP00000013546/1-754 TVLNLAFAQL ILGIPEQALS LLHMAIEPIL ADGAVLDKGR AMFLVAKCQV bmy_01432T0/1-769 TVLNLAFAQL ILGIPEQALS LLHMAIEPIL ADGAVLDKGR AMFLVAKCQV BACU013624/1-755 TVLNLAFAQL ILGIPEQALS LLHMAIEPIL ADGAVLDKGR AMFLVAKCQV 701 750 ENSP00000261819/1-755 ASAASYDQPK KAEALEAAIE NLNEAKNYFA KVDCKERIRD VVYFQARLYH ENSBTAP00000004025/1-755 ASAASCEPLK KAEALEAAIE NLNEAKNYFA KVDCKEQIRD VVYFQARLYH ENSTTRP00000013546/1-754 ASAASYEPLK KAAVLEAAIE NLSEAKNYFA KVDCKEQIRD VVYFQARLYH bmy_01432T0/1-769 ASAASYEPLK KAEVLEAAIE NLNEAKNYFA KVDCKEQIRD VVYFQARLYH BACU013624/1-755 ASAASYEPLK KAEVLEAAIE NLNEAKNYFA KVDCKEQIRD VVYFQARLYH 751 800 ENSP00000261819/1-755 TLGKTQERNR CAMLFRQLHQ ELPSHGVPLI NHL------- ------- ENSBTAP00000004025/1-755 TLGKTQERNR CAMLFRQLHQ DLPFHGVPLI NLL------- ------- ENSTTRP00000013546/1-754 TLGKTQERNR CAMLFRQLHQ DLPFHGVPLI NLL------- ------- bmy_01432T0/1-769 TLGKTQERNR CAMLFRQLHQ DLPFHGVPLI NLLYKGYRLF VSKWLVY BACU013624/1-755 TLGKTQERNR CAMLFRQLHQ DLPFHGVPLI NLL------- -------