KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:47 2014 Check: 00 .. Name: ENSTTRP00000010453/1-582 Len: 906 Check: 2514 Weight: 1.00 Name: ENSP00000338235/1-582 Len: 906 Check: 2712 Weight: 1.00 Name: ENSBTAP00000004031/1-583 Len: 906 Check: 572 Weight: 1.00 Name: bmy_10830T0/1-564 Len: 906 Check: 8447 Weight: 1.00 Name: BACU000511/1-891 Len: 906 Check: 564 Weight: 1.00 // 1 50 ENSTTRP00000010453/1-582 MATWSWLDEL AQQAEEGSAR LQEMLSVGLG FLRTELGLDL GLEPKRYPGW ENSP00000338235/1-582 MAARSWQDEL AQQAEEGSAR LREMLSVGLG FLRTELGLDL GLEPKRYPGW ENSBTAP00000004031/1-583 MATRSWLDEL AQEAEDGSAR LQEMLSVGLG FLRTELGLDL GLEPKRYPGW bmy_10830T0/1-564 MATRSWLDEL AQQAEEGSAR LQEMLSVGLG FLRTELGLDL GLEPKRYPGW BACU000511/1-891 MATRSWLDEL AQQAEEGWAR LQEMLSVGLG FLRTELGLDL GLGPKRYLGW 51 100 ENSTTRP00000010453/1-582 VILVGMGALG LLLLFLLGYG WAAACAGARK KRRSPPRKRE E-AAAAPGPA ENSP00000338235/1-582 VILVGTGALG LLLLFLLGYG WAAACAGARK KRRSPPRKRE E-AAAVPAAA ENSBTAP00000004031/1-583 VILVGTGALG LLLLFLLGYG WAAACAGARK KRRNPPRKRE EAAAAAPAPA bmy_10830T0/1-564 VILVGMGALG LLLLFLLGYG WAAACAGARK KRRSPPRKRE E-AAAAPGPA BACU000511/1-891 -------ARG LLLLFLLGYG WAAACAGARK KRRSPPRKRE E-AAAAPGPA 101 150 ENSTTRP00000010453/1-582 ADDLGVLKNL RSEEQKKKNX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000338235/1-582 PDDLALLKNL RSEEQKKKNR KKLSEKPKPN GRTVEVAEGE AVRTPQSVTA ENSBTAP00000004031/1-583 ADDQGVLKNL RSEEQKKKNR KKLPEKPKPN GRTIEVAEEE VVRTPRSVTA bmy_10830T0/1-564 SDDLGVLKNL RSEEQKKKNR KKLPEKPK-- ---------- VVVLP----- BACU000511/1-891 SDDLGVLKNL RSEEQKKKNR KKLPEKPKPN GRTIEVAEEE VVRTPRSAAA 151 200 ENSTTRP00000010453/1-582 XXPLETHKKN E----KSKKN KKKSKSDAKA VQNSSRHDGK EVDEGAWETK ENSP00000338235/1-582 KQPPEIDKKN E----KSKKN KKKSKSDAKA VQNSSRHDGK EVDEGAWETK ENSBTAP00000004031/1-583 KQPIETDKKN E----KSKKN KKKSKSDAKA VQNSSRHDGK EVDEGAWETK bmy_10830T0/1-564 -----CHPSN ILFCFQSKKN KKKSKSDAKA VQNSSRHDGK EVDEGAWETK BACU000511/1-891 KQPLETHKKN E----KSKKN KKKSKSDAKA VQNSSRHDGK EVDEGAWETK 201 250 ENSTTRP00000010453/1-582 ISHREKRQQR KRDKVQSDSG SLDSTIPGIE NTITVTTEQV TTASFPVGSK ENSP00000338235/1-582 ISHREKRQQR KRDKVLTDSG SLDSTIPGIE NTITVTTEQL TTASFPVGSK ENSBTAP00000004031/1-583 ISHREKRQQR KRDKVQSDSG SLDSTIPGIE NTITVTTEQV TTASFPVGSK bmy_10830T0/1-564 ISHREKRQQR KRDKVQSDSG SLDSTIPGIE NTITVTTEQV TTASFPVGSK BACU000511/1-891 ISHREKRQQR KRDKVQSDSG SLDSTIPGIE NTITVTTEQV TTASFPVGSK 251 300 ENSTTRP00000010453/1-582 KNKGDSHLNV QVSNFKSGKG DSTLQVSSGL NENLTVNGGG WNEKSVKLSS ENSP00000338235/1-582 KNKGDSHLNV QVSNFKSGKG DSTLQVSSGL NENLTVNGGG WNEKSVKLSS ENSBTAP00000004031/1-583 KNKGDSHLNV QVSNFKSGKG DSTLQVSPGL NENLTINGGG WNEKSMKLSS bmy_10830T0/1-564 KNKGDSHLNV QVSNFKSGKG DSTLQVSSGL NENLTVNGGG WNEKSVKLSS BACU000511/1-891 KNKGDSHLNV QVSNFKSGKG DSTLQ---GL NENLTVNGGG WNEKSVKLSS 301 350 ENSTTRP00000010453/1-582 QISAGEEKWN SVSPPSAGKR KTEPSAWGQD GGDANANGKD WGRSWSDRSI ENSP00000338235/1-582 QISAGEEKWN SVSPASAGKR KTEPSAWSQD TGDANTNGKD WGRSWSDRSI ENSBTAP00000004031/1-583 QISAGEEKWN SVSPAPAGKR KTEPSAWGQD TGDANANGKD WGRSWNDRSI bmy_10830T0/1-564 QTSAGEEKWN SVSPASAGKR KTEPSAWGQD SGDANANGKD WGRSWSDRSI BACU000511/1-891 QISAGEEKWN SVSPASAGKR KTEPSAWGQD SGDANANGKD WGRSWSDRSI 351 400 ENSTTRP00000010453/1-582 FSGIGSTAEP VSQSTTSDYQ WDVSRNQPYI DDEWSGLXXX XXXXXXXXXX ENSP00000338235/1-582 FSGIGSTAEP VSQSTTSDYQ WDVSRNQPYI DDEWSGLNGL SSADPNSDWN ENSBTAP00000004031/1-583 FSGIGSTAEP VSQSTTSDYQ WDVSRNQPYI DDEWSGLNGL SSADPSSDWN bmy_10830T0/1-564 FSGIGSTAEP VSQSTTSDYQ WDVSRNQPYI DDEWSGLNGM SSADPSSDWN BACU000511/1-891 FSGIGSTAEP VSQSTTSDYQ WDVSRNQPYI DDEWSGLNGM SSADPSSDWN 401 450 ENSTTRP00000010453/1-582 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV SDEDKEKGEG ALPTGKSKKK ENSP00000338235/1-582 APAEEWGNWV DEERASLLKS QEPIPDDQKV SDDDKEKGEG ALPTGKSKKK ENSBTAP00000004031/1-583 APAEEWGNWV DEERASLLKS QEPIPDDQKV SDDDKEKGEG ALPTGKSKKK bmy_10830T0/1-564 APAEEWGNWV DEERASLQKS QEPIPDDQKV SDDDKEKGEG ALPTGKSKKK BACU000511/1-891 APAEEWGNWV DEERASLQKS QEPIPDDQKV SDDDKEKGEG ALPTGKSKKK 451 500 ENSTTRP00000010453/1-582 KKKKKKQGED NSPAQDTEEL EKEIREELPV NTSKVRPKQE KAFSLKTIST ENSP00000338235/1-582 KKKKKKQGED NSTAQDTEEL EKEIREDLPV NTSKTRPKQE KAFSLKTIST ENSBTAP00000004031/1-583 KKKKKKQGED NALAQDTEEL EKEIREELPV NTSKVRPKQE KAFSLKTIST bmy_10830T0/1-564 KKKKKKQGED NSPAQDTEEL EKEIREELPV NTSKVRPKQE KAFSLKTIST BACU000511/1-891 KKKKKKQGED NSPAQDTEEL EKEIREELPV NTSKVRPKQE KAFSLKTIST 501 550 ENSTTRP00000010453/1-582 SDPAEALIKN SQPIKTLPPA ISTEPSVISS KSDSDKSSSQ VPPMLQETDK ENSP00000338235/1-582 SDPAEVLVKN SQPIKTLPPA TSTEPSVILS KSDSDKSSSQ VPPILQETDK ENSBTAP00000004031/1-583 SDPADALIKN SQPIKTLPPA ISTEPSVILS KNDSDKSSSQ VPPMLQETDK bmy_10830T0/1-564 SDPAEALIKN SQPIKTLPPA ISTEPSVILS KSDSDKSSSQ VPPMLQETDK BACU000511/1-891 SDPAEALIRN SQPIKTLPPA ISTEPSVILS KSDSDKSSSQ VPPMLQETDK 551 600 ENSTTRP00000010453/1-582 SKSNTKQNSV PPSQTKSETS WESPKQIKKK KKARRET--- ---------- ENSP00000338235/1-582 SKSNTKQNSV PPSQTKSETS WESPKQIKKK KKARRET--- ---------- ENSBTAP00000004031/1-583 SKSNTKQNSV PPSQTKSETS WESPKQIKKK KKARRET--- ---------- bmy_10830T0/1-564 SKSNTKQNSV PPSQTKSETS WESPKQIKKK KKARRET--- ---------- BACU000511/1-891 SKSNTKQNSV PPSQTKSETS WESPKQIKKK KKARRETTER DASNWSTDKL 601 650 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 KTLFLAVRVQ DEEGKCEVTQ VNKLDGEASI NNRKGKLIFF YEWSIKLNRT 651 700 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 RTSKSGVQYK GHVEIPNLSD ENTVDELEIS VSPAKGEPDT NLVAIMKEEG 701 750 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 VKLLREAMGI YISTLKTEFT QGMSLPTMNG EAVDPVGQPA LKTEESKAKA 751 800 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 VPSKTQARPV GVKIPTCKNT LRETFLTSPE ELHRIFTTQE LVWAFTHAPA 801 850 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 MLEADKGGKF HLVDGNVSGE FTDIEFKAVI SLIPERHIVM KWRFKSWPEG 851 900 ENSTTRP00000010453/1-582 ---------- ---------- ---------- ---------- ---------- ENSP00000338235/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004031/1-583 ---------- ---------- ---------- ---------- ---------- bmy_10830T0/1-564 ---------- ---------- ---------- ---------- ---------- BACU000511/1-891 HFATITLTFI DKNGETELCM EGRGIPAPEE ERTQQGWQRY YFEGLKQTFG 901 950 ENSTTRP00000010453/1-582 ------ ENSP00000338235/1-582 ------ ENSBTAP00000004031/1-583 ------ bmy_10830T0/1-564 ------ BACU000511/1-891 YGARLF