KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:52 2014 Check: 00 .. Name: ENSTTRP00000005703/1-768 Len: 775 Check: 9921 Weight: 1.00 Name: ENSP00000318821/1-775 Len: 775 Check: 4824 Weight: 1.00 Name: ENSBTAP00000004036/1-775 Len: 775 Check: 4194 Weight: 1.00 Name: bmy_16601T0/1-775 Len: 775 Check: 7603 Weight: 1.00 Name: BACU006826/1-775 Len: 775 Check: 7106 Weight: 1.00 // 1 50 ENSTTRP00000005703/1-768 MEKFGMNFGG GPSKNDLLET IETQKKQLLQ YQARLKDVVR AYKSLLKEK- ENSP00000318821/1-775 MEKFGMNFGG GPSKKDLLET IETQKKQLLQ YQARLKDVVR AYKSLLKEKE ENSBTAP00000004036/1-775 MEKFGMNFGG GPSKKDLLEI IETQKKQLLQ YQTRLKDVVR AYKSLLKEKE bmy_16601T0/1-775 MEKFGMNFGG GPSKKDLLET IETQKKQLLQ YQARLKDVVR AYKSLLKEKE BACU006826/1-775 MEKFGMNFGG GPSKKDLLET IETQKKQLLQ YQARLKDVVR AYKSLLKEKE 51 100 ENSTTRP00000005703/1-768 ALEASINVLS VSH-ADVGLA XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318821/1-775 ALEASIKVLS VSHEADVGLA GVQLPGLTFP DSVDDRCSTH SEDSTGTATS ENSBTAP00000004036/1-775 ALEASIKVLS VSHEADVGLA GVQPQGLTFP DSVDDRCSTH SEDSTGTAAS bmy_16601T0/1-775 ALEASIKVLS VSHEADVGLA GVQPQGLTFP DSVDDRCSTH SEDSTGTATS BACU006826/1-775 ALEASIKVLS VSHEADVGLA GVQPQGLTFP DSVDDRCSTH SEDSTGTATS 101 150 ENSTTRP00000005703/1-768 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318821/1-775 LDTAASLTST KGEFGVEDDR PARGPPPPKS EEASWSESGV SSSSGDGPFA ENSBTAP00000004036/1-775 LDTAASLTST KGEFGIEDDR LARGPPPLKL EEASGSESGV SCSSGDGPSG bmy_16601T0/1-775 LDTAASLTST KGEFGVEDDR LARGPPPLKC EEASGSESGV SSSSGDGPSG BACU006826/1-775 LDTAASLTST KGEFGVEDDR LARGPPPLKC EEASGSESGV SSSSGDGPSG 151 200 ENSTTRP00000005703/1-768 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318821/1-775 GGEVDKRLHQ LKTQLATLTS SLATVTQEKS RMEASYLADK KKMKQDLEDA ENSBTAP00000004036/1-775 GGEVDKRLHQ LKTQLATLTS SLATVTQEKS RMEASYLADK KKMKQDLEDA bmy_16601T0/1-775 SGEVDKRLHQ LKTQLATLTS SLATVTQEKS RMEASYLADK KKMKQDLDNA BACU006826/1-775 SGEVDKRLHQ LKTQLATLTS SLATVTQEKS RMEASYLADK KKMKQDLDNA 201 250 ENSTTRP00000005703/1-768 SKKAEEERGR LEGELKGLQE QIAETKARLI TQQHDRAQEQ SDHALMLREL ENSP00000318821/1-775 SNKAEEERAR LEGELKGLQE QIAETKARLI TQQHDRAQEQ SDHALMLREL ENSBTAP00000004036/1-775 SKKAEEERGR LEGELKGLQE QIAETKARLI TQQHDRAQEQ SDHALMLREL bmy_16601T0/1-775 SKKAEEERGR LEGELKGLQE QIAETKARLI TQQHDRAQEQ SDHALMLREL BACU006826/1-775 SKKAEEERGR LEGELKGLQE QIAETKARLI TQQHDRAQEQ SDHALMLREL 251 300 ENSTTRP00000005703/1-768 QKLLQEERTQ RQDLELRLEE TREALAGRAY AAGQMEGFEL QTKQLTREVE ENSP00000318821/1-775 QKLLQEERTQ RQDLELRLEE TREALAGRAY AAEQMEGFEL QTKQLTREVE ENSBTAP00000004036/1-775 QKLLQEERAQ RQDLELRLEE TREALAGRAY AAGQMEGFEL QTKQLTREVE bmy_16601T0/1-775 QKLLQEERTQ RQDLELRLEE TREALAGRAY AAGQMEGFEX QTKQLTREVE BACU006826/1-775 QKLLQEERTQ RQDLELRLEE TREALAGRAY AAGQMEGFEL QTKQLTREVE 301 350 ENSTTRP00000005703/1-768 ELKGELQALR DEKNRPDPRL QELQEEAACL KSHFQTQLQQ EMRKTAVAED ENSP00000318821/1-775 ELKSELQAIR DEKNQPDPRL QELQEEAARL KSHFQAQLQQ EMRKTALAED ENSBTAP00000004036/1-775 ELKGELQALR DEKNQPDPRL KELQEEAACL KSHFQAQLQQ EMRKTAVAED bmy_16601T0/1-775 ELKGELQGLR DEKNRPDPRL QELQEEAACL KSHFQAQLQQ EMRKTALAED BACU006826/1-775 ELKGELQALR DEKNRPDPRL QELQEEAACL KSHFQAQLQQ EMRKTALAED 351 400 ENSTTRP00000005703/1-768 QLRQQSQLEE QRVAALENQI SEVSELLGTY EKAKQKDQLA IQKLKERILQ ENSP00000318821/1-775 QLRQQSQVEE QRVAALENQI SEVSELLGTY EKAKQKDQLA IQKLKERILQ ENSBTAP00000004036/1-775 QLRQQSQLEE QRVVALENQI SQVSELLGTY EKAKQKDQLA IQKLKERILQ bmy_16601T0/1-775 QLRQQSQLEE QRVAALENQI SEVSELLGTY EKAKQKDQLA IQKLKEXILQ BACU006826/1-775 QLQQQSQLEE QRVAALENQI SEVSELLGTY EKAKQKDQLA IQKLKERILQ 401 450 ENSTTRP00000005703/1-768 LDLENKTLAL AASSRSPLDS H-EESSLDVN VKDMKL---- KLLQVAARKS ENSP00000318821/1-775 LDLENKTLAL AASSRSPLDS HGEESSLDVN VLKDKMEKLK RLLQVAARKS ENSBTAP00000004036/1-775 LDLENKTLAL AASSRSPLDS HGEESSLDVN VLKDKMEKLK RLLQVAARKS bmy_16601T0/1-775 LDLENKTLAL AASSRSPLDS HGEESSLDVN VLKDKMEKLK RLLQVAARKS BACU006826/1-775 LDLENKTLAL AASSRSPLDS HGEESSLDVN VLKDKMEKLK RLLQVAARKS 451 500 ENSTTRP00000005703/1-768 QVTLDVEKLC NLEIMPSSEA ADGEKASALY YQQELKQLKE EFERYKMRAQ ENSP00000318821/1-775 QVTLDVEKLC DLEIMPSSEA ADGEKATALY YQQELKQLKE EFERYKMRAQ ENSBTAP00000004036/1-775 QVTLDVEKLC DLEIMPSSEA ADGEKATALY YQQELKQLKE EFERYKMRAQ bmy_16601T0/1-775 QVTLDVEKLC NLEIMPSSEA ADGEKASVLY YQQELKQLKE EFERYKMRAQ BACU006826/1-775 QVTLDVEKLC NLEIMPSSEA ADGEKASALY YQQELKQLKE EFERYKMRAQ 501 550 ENSTTRP00000005703/1-768 VVLKSKNVKD GNLGKELEEA REQLAELKEK YISLRLSCEE LDCQHQQEAE ENSP00000318821/1-775 VVLKSKNTKD GNLGKELEAA QEQLAELKEK YISLRLSCEE LEHQHQQEAD ENSBTAP00000004036/1-775 VVLKSKNVKD GNLGKELEEA REQLAELKEK YISLRLSCEE LERQHQQEAE bmy_16601T0/1-775 VVLKSKNVKD GNLGKELEEA REQLAELKEK YISLRLSCEE LECQHQQEAE BACU006826/1-775 VVLKSKNVKD GNPGKELEEA REQLAELKEK YISLRLSCEE LECQHQQEAE 551 600 ENSTTRP00000005703/1-768 GWKQELARLQ HIHRQELERS QLDFRDRTLK LEEELHKQRD RALAVLAEKD ENSP00000318821/1-775 DWKQELARLQ QLHRQELERC QLDFRDRTLK LEEELHKQRD RALAVLTEKD ENSBTAP00000004036/1-775 GWKQELARLQ HGHRQELERS QLDFRDRTLK LEEELHKQRD RALAVLAEKD bmy_16601T0/1-775 GWKQELARLQ HIHRQELERS QLDFRDRALK LEEELHKQRD RALAVLAEKD BACU006826/1-775 GWKQELARLQ HIHRQELERS QLDFRDRTLK LEEELHKQRD RALAVLAEKD 601 650 ENSTTRP00000005703/1-768 LELEQLRSVA LSSGLPGRRS PVGSVGPGDP ADTSAPDSLT QALQLAAANE ENSP00000318821/1-775 LELEQLRSVA LASGLPGRRS PVGGGGPGDP ADTSSSDSLT QALQLAAANE ENSBTAP00000004036/1-775 LELEQLRSVA LSSGLPGRRS PVGGAGPRDQ ADTSPPDSLT QALQLAAVSE bmy_16601T0/1-775 LELEQLRSVA SSSGLPGRRS PVGSVGPGDP ADTSAPDSLT QALQLAAANE BACU006826/1-775 LELEQLRSVA LSSGLPGRRS PVGSVGPGDP ADTSALDSLT QALQLAAASE 651 700 ENSTTRP00000005703/1-768 PTFFLYAEQL ARKEVEITSL RKQKHRLEGE VHQLQDRLLE EGERHREEVG ENSP00000318821/1-775 PTFFLYAEQL ARKEVEITSL RKQKHRLEVE VHQLQDRLLE EGERHREEVA ENSBTAP00000004036/1-775 PTFFLYAEQL ARKEVEITSL RKQKHRLEVE VHRLRDRLLE EGERHREEVG bmy_16601T0/1-775 PTFFLYAEQL ARKDVEVTSL RKQKHRLEGE VHQLQDRLLE EGERHREEVG BACU006826/1-775 PTFFLYAEQL ARKEVEVTSL RKQKHRLEGE VHQLQDRLLE EGERHREEVG 701 750 ENSTTRP00000005703/1-768 ALQSHIAKNI RDQSREGANL EYLKNIIYRF LTLPDTVGRQ QTLTAILTIL ENSP00000318821/1-775 ALQSHIEKNI RDQSREGANL EYLKNIIYRF LTLPDSLGRQ QTLTAILTIL ENSBTAP00000004036/1-775 ALQSHIAKHS RDQSREGANL EYLKNIIYRF LTLPDTLGRQ QTLTAILTIL bmy_16601T0/1-775 ALQSHIAKNI RDQSREGANL EYLKNIIYRF LTLPDTVGRQ QTLTAILTIL BACU006826/1-775 ALQSHIAKNI RDQSREGANL EYLKNIIYRF LTLPDTVGRQ QTLTAILTIL 751 800 ENSTTRP00000005703/1-768 HFSPEEKQVI MRLPAGGSWW PSGKR ENSP00000318821/1-775 HFSPEEKQVI MRLPTSASWW PSGKR ENSBTAP00000004036/1-775 HFSPEEKQAI MRLPVGGGWW PSGKR bmy_16601T0/1-775 HFSPEEKQVI MRLPAGASWW PSGKR BACU006826/1-775 HFSPEEKQVI MRLPASASWW PSGKR