KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:53 2014 Check: 00 .. Name: ENSP00000323714/1-242 Len: 248 Check: 1803 Weight: 1.00 Name: ENSBTAP00000004037/1-230 Len: 248 Check: 7039 Weight: 1.00 Name: ENSTTRP00000013301/1-210 Len: 248 Check: 484 Weight: 1.00 Name: BACU002867/1-204 Len: 248 Check: 6520 Weight: 1.00 Name: bmy_08393T0/1-147 Len: 248 Check: 8499 Weight: 1.00 // 1 50 ENSP00000323714/1-242 MLAVEVSEAE GGIREW--EE EEKEEEAAER TPTGEKSPNS PRTLLSLRGK ENSBTAP00000004037/1-230 PLLGQAEEAE DGIQKWKKED EKEEEEAGAG PCMGE----- ---------E ENSTTRP00000013301/1-210 SLTSPVP--- ---------- ------STLG PPCQV----- ---------E BACU002867/1-204 ---------- ---------- ------MWVG EEALR----- ---------K bmy_08393T0/1-147 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000323714/1-242 ARTGGPMEVK LELHPLQNRW ALWFFKNDRS RAWQDNLHLV TKVDTVEDFW ENSBTAP00000004037/1-230 ALRKTPEEGK PDLHPLLNRW ALWFFKNDRS RAWQNNLHRV TKFNTVEDFW ENSTTRP00000013301/1-210 NTQMAQEVGG ASSWPPSSRW ALWFFKNDCS RAWQDNLHLV IKFDTVEDFW BACU002867/1-204 ARDEGPVESK LELHPLLNRW ALWFFKNDRS RTWQDNLHLV TKFDTVEGFW bmy_08393T0/1-147 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000323714/1-242 ALYSHIQLAS KLSSGCDYAL FK----DGIQ PMWEDSRNKR GGRWLVSLAK ENSBTAP00000004037/1-230 AIYNNIQLAS KLSSGCDYAL FK----DGIK PMWEDSRNKR GGRWLVSLTK ENSTTRP00000013301/1-210 AMYNNIQLAS KLSSGCDYA- FK----DGIE PMWEDSRNRR GGRWLVSLSK BACU002867/1-204 AMYSNIQLAS KLSSGCDYAL FK----DGIE PMWEDSRNRR GGRWLVSLAK bmy_08393T0/1-147 -MYNNIQLAS KLSSGCDYAL FKPASQDGIE PMWEDSRNRR GGRWLVSLAK 151 200 ENSP00000323714/1-242 QQRHIELDRL WLETLLCLIG ESFEEHSREV CGAVVNIRTK GDKIAVWTRE ENSBTAP00000004037/1-230 QQRHIELDHL WLETLLCLIG ESFGEHSQEV CGAVINIRAK GDKIAVWTRE ENSTTRP00000013301/1-210 QQRHSELDHL WLETLLCLIG ESFEEHSREV CGAVINIRTK GDKIAVWTRE BACU002867/1-204 QQRHSELDHL WLETLLCLIG ESFEEHSREV CGAVINIRTK GDKIAVWTRE bmy_08393T0/1-147 QQRHSELDHL WLETLLCLIG ESFEEHSREV CGAVINIRTK GDKIAVWTRE 201 250 ENSP00000323714/1-242 AENQAGVLHV GRVYKERLGL SPKTIIGYQA HADTATKSNS LAKNKFVV ENSBTAP00000004037/1-230 AENQEGVLHI GRVYKERLGL STKTIIGYQA HADTATKSNS LAKNKFVV ENSTTRP00000013301/1-210 TENQEGVLRI GRVYKERLGL STKTIIGYQA HADTAAKSNS LAKNKFVV BACU002867/1-204 TENQEGVLRI GRVYKERLGL STKTIIGYQA HADTAAKSNF LAKNKFVV bmy_08393T0/1-147 TENQEGVLRI GCVYKERLGL STKTIIGYQA HADTAAKSNS LAKNKFVV