KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:54 2014 Check: 00 .. Name: ENSP00000339532/1-507 Len: 618 Check: 1300 Weight: 1.00 Name: ENSBTAP00000004047/1-506 Len: 618 Check: 4915 Weight: 1.00 Name: bmy_00458T0/1-608 Len: 618 Check: 4677 Weight: 1.00 Name: BACU015154/1-464 Len: 618 Check: 8322 Weight: 1.00 Name: ENSTTRP00000009178/1-505 Len: 618 Check: 517 Weight: 1.00 // 1 50 ENSP00000339532/1-507 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004047/1-506 ---------- ---------- ---------- ---------- ---------- bmy_00458T0/1-608 MMLTSPFFKA MAKPAFHYWR VNHNSAMPAT SHRRPPLARS RCDRATRLPF BACU015154/1-464 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009178/1-505 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000339532/1-507 ---------- ---------- ---------- ---------- -MCDIEEATN ENSBTAP00000004047/1-506 ---------- ---------- ---------- ---------- -MSDVQEATN bmy_00458T0/1-608 PGHRGGFRRG DLGALASPGP GAGRVFAGGR DYIQELGSTA NMSDVQEATN BACU015154/1-464 ---------- ---------- ---------- ---------- -MSDVQEATN ENSTTRP00000009178/1-505 ---------- ---------- ---------- ---------- -MSDVQEATN 101 150 ENSP00000339532/1-507 QLLDVNLHEN QKSVQVTESD LGSESE-LLV TIGATVPTGF EQTAADEVRE ENSBTAP00000004047/1-506 QLLDVNLCEN QMSIQVTESG PRSESEHLQV TIGATVPTGF EQTAADEVRE bmy_00458T0/1-608 QLLDVNLHEN QRSVQVTESG LRSESEHLQV TIGATVPTGF EQTAADEVRE BACU015154/1-464 QLLDVNLHEN QRSVQVTESG LRSESEHLQV TIGATVPTGF EQTAADEVRE ENSTTRP00000009178/1-505 QLLDVNLHEN QRSIQVTESG LRSESEHLQV TIGATVPTGF EQTAADEVRE 151 200 ENSP00000339532/1-507 KLGSSCKISR DRGKIYFVIS VESLAQVHCL RSVDNLFVVV QEFQDYQFKQ ENSBTAP00000004047/1-506 KLGSSCKISK DRGKIYFDIS VDSLAQVHCL RSVDNLFVVV QEFKDYQFKE bmy_00458T0/1-608 KLGSSCKISK DRGKIYFDIS VESLAQVHCL RSVDNLFVVV QEFKDYQFKE BACU015154/1-464 KLGSSCKISK DRGKIYFDIS VESLAQVHCL RSVDNLFVVV QEFKDYQFKE ENSTTRP00000009178/1-505 KLGSPCKISK DRGKIYFDIS VESLAQVHCL RSVDNLFVVV QEFKDYQFKE 201 250 ENSP00000339532/1-507 TKEEVLKDFE DLAGKLPWSN PLKVWKINAS FKKKKAKRKK INQNSSKEKI ENSBTAP00000004047/1-506 TKEEVLKDFE ELAGKLPWSD PLKIWKINTC FKKKKTKRRK LNPNSSKQKI bmy_00458T0/1-608 TKEEVLKDFE DLAGKLPWSD PLKIWKINTC FKKKKTKHKK INQNSSKEKI BACU015154/1-464 TKEEVLKDFE DLAGKLPWSD PLKIWKINTC FKKKKTKHKK INQNSSKEKI ENSTTRP00000009178/1-505 TKEEVLKDFE DLAGKLPWSD PLKIWKINTC FKKKKTKHKK INQNSSKEKI 251 300 ENSP00000339532/1-507 NNGQEVKIDQ RNVKKEFTSH ALDSHILDYY ENPAIKEDVS TLIGDDLASC ENSBTAP00000004047/1-506 DNGRGDTTVE KDVKKELTNS VSDSQISDYY ENPAIKEQVS TLIGDGLTSC bmy_00458T0/1-608 ESGRGDKTDE RDIKKEFPNN VLDSQILDYY ENPAIKEEIS TLVGDDLTSC BACU015154/1-464 ESGRGDKTDE RDIKKEFTNN VLDSQILDYY ENPAIKEEIS TLVGDNLTSC ENSTTRP00000009178/1-505 ESGRGDKTDE RDVKKEFTNN VLDSQILDYY ENAAIKEEIS TLVGDDLTSC 301 350 ENSP00000339532/1-507 KDETDESSKE ETEPQVLKFR VTCNRAGEKH CFTSNEAARD FGGAVQDYFK ENSBTAP00000004047/1-506 KDETEENSKE EADPEVLKFR VTCNRAGEKH CFSSNEAARD FGGAVQDYFK bmy_00458T0/1-608 KDETEESSKE ETDPEVLKFR VTCNRAGEKH CFSSNEAARD FGGAVQDYFK BACU015154/1-464 KDETEESSKE ETDPEVLKFR VTCNRAGEKH CFSSNEAARD FGGAVQDYFK ENSTTRP00000009178/1-505 KDETEESSKE ETDPEVLKFR VTCNRAGEKH CFSSNEAARD FGGAVQDYFK 351 400 ENSP00000339532/1-507 WKADMTNFDV EVLLNIHDNE VIVGIALTEE SLHRRNITHF GPTTLRSTLA ENSBTAP00000004047/1-506 WKADMTNFDV EVLLNIHDNE VVVGIALTEE SLHRRNITHF GPTTLRSTLA bmy_00458T0/1-608 WKADMTNFDV EVLLNIHDNE IVVGIALTEE SLHRRNITHF GPTTLRSTLA BACU015154/1-464 WKADMTNFDV EVLLNIHDNE IVVGIALTEE SLHRRNITHF GPTTLRSTLA ENSTTRP00000009178/1-505 WKADMTNFDV EVLLNIHDNE IVVGIALTEE SLHRRNITHF GPTTLRSTLA 401 450 ENSP00000339532/1-507 YGMLRLCDPL PYDIIVDPMC GTGAIPIEGA TEWSDCFHIA GDNNPLAVNR ENSBTAP00000004047/1-506 YGMLRLCAPQ PTDIIVDPMC GTGAIPIEGA TEWSNCYHIA GDNNPLAVNR bmy_00458T0/1-608 YGML-SEADE SRDFFN---- -----VYNGA TEWSNCYHIA GDNNPLAVNR BACU015154/1-464 YGMLRLCAPQ PTDIIVDPMC GTGAISIEGA TEWSNCYHIA GDNNPLAVNR ENSTTRP00000009178/1-505 YGML-LCAPQ PTDIIVDPMC GTGAISIEGA TEWSNCYHIA GDNNPLAVNR 451 500 ENSP00000339532/1-507 AANNIASLLT KSQIKEG--- ---------- ----KPSWGL PIDAVQWDIC ENSBTAP00000004047/1-506 AANNISSLLT KIQVKEG--- ---------- ----KLPLGL PIDTIQWDIC bmy_00458T0/1-608 AANNISSLLT KSQVKEGYLF SQDMLKHLFF CRHSKLSWGL PIDTIQWDIC BACU015154/1-464 AANNISSLLT KSQVKEG--- ---------- ----KLSWGL PIDTIQWDIC ENSTTRP00000009178/1-505 AANNISSLLT KSQVKEG--- ---------- ----KLSWGL PIDTIQWDIC 501 550 ENSP00000339532/1-507 NLPLRTGSVD IIVTDLPFGK RMGSKKRNWN LYPACLREMS RVCTPTTGRA ENSBTAP00000004047/1-506 NLPLRTGSVD IIVTDMPFGK RMGSKKRNWN LYPACLREMS RVCRPGTGRA bmy_00458T0/1-608 NLPLRTGSVD IIVTDMPFGK RMGSKKRNWN LYPACLQEMS RVCRPGTGQA BACU015154/1-464 NLPLRTGSVD IIVTDMPFGK RMGSKKRNWN LYPACLQEMS RVCRPGTGQA ENSTTRP00000009178/1-505 NLPLRTGSVD IIVTDMPFGK RMGSKKRNWN LYPACLREMS RVCRPGTGQA 551 600 ENSP00000339532/1-507 VLLTQDTKCF TKALSGMRHV WRKVDTVWVN VGGLRAAVYV LIRTPQAFVH ENSBTAP00000004047/1-506 VLLTQDKKCF AKALSGMGHL WRKVHTVWVN IGGLHAAVYL LKRTPQSFVH bmy_00458T0/1-608 VLLTQDKKCF TKALCGMGHL WRKVHTVWVN IGGLHAAVYL LKRTPQTFVH BACU015154/1-464 VLLTQDKKCF TK-------- ---------- ---------- ---------- ENSTTRP00000009178/1-505 VLLTQDKKCF IKALSGMGHL WRKVHTVWVN IGGLHAAVYL LKRTPQTFVH 601 650 ENSP00000339532/1-507 PSE--QDGER GTLWQCKE ENSBTAP00000004047/1-506 PSE--EDGER CPCTQR-- bmy_00458T0/1-608 LQNKMEKGLL GNAKTEDD BACU015154/1-464 -SE--QDGER PPW----- ENSTTRP00000009178/1-505 PSE--QDGER SPW--CKD