KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:54 2014 Check: 00 .. Name: bmy_13025T0/1-248 Len: 285 Check: 9669 Weight: 1.00 Name: ENSP00000217740/1-232 Len: 285 Check: 2554 Weight: 1.00 Name: ENSBTAP00000004048/1-232 Len: 285 Check: 1903 Weight: 1.00 Name: BACU001575/1-232 Len: 285 Check: 2430 Weight: 1.00 Name: ENSTTRP00000010360/1-232 Len: 285 Check: 2172 Weight: 1.00 // 1 50 bmy_13025T0/1-248 -------MRA AHVVRTCGPR EVLQGR---- ---------- ---------- ENSP00000217740/1-232 MGSVLSTDSG KSAPASATAR ALERRRDPEL PVTSFDCAVC LEVLHQPVRT ENSBTAP00000004048/1-232 MGSVLSSDSG KSAPASATPR ALERRGDPEL PVTSFDCSVC LEVLHHPVRT BACU001575/1-232 MGSVLSSDSG KSAPASATPR ALERRGDPEL PVTSFDCSVC LEVLHHPVRT ENSTTRP00000010360/1-232 MGSVLSSDSG KSAPASATPR ALERRGDPEL PVTSFDCSVC LEVLHHPVRT 51 100 bmy_13025T0/1-248 -----FCRSC IATSLKNNKW TCPYCRAYLP SEGVPATDVA KKMKSEFQNC ENSP00000217740/1-232 RCGHVFCRSC IATSLKNNKW TCPYCRAYLP SEGVPATDVA KRMKSEYKNC ENSBTAP00000004048/1-232 RCGHVFCRSC IATSLKNNKW TCPYCRAYLP SEGVPAADVA KRMKSEFRNC BACU001575/1-232 RCGHVFCRSC IATSLKNNKW TCPYCRAYLP SEGVPATDVA KKMKSEFQNC ENSTTRP00000010360/1-232 RCGHVFCRSC IATSLKNNKW TCPYCRAYLP SEGVPATDVA KKMKSEFQKC 101 150 bmy_13025T0/1-248 TECDTLVCLS EMRAHIRTCQ KYIAKYGPLQ ELGETATRCV CPFCQKELDE ENSP00000217740/1-232 AECDTLVCLS EMRAHIRTCQ KYIDKYGPLQ ELEETAARCV CPFCQRELYE ENSBTAP00000004048/1-232 TECDTLVCLS EMRAHTRTCQ KYIDKYGPLQ ELGETTTRCV CPFCQKELDE BACU001575/1-232 TECDTLVCLS EMRAHIRTCQ KYIDKYGPLQ ELGETATRCV CPFCQKELDE ENSTTRP00000010360/1-232 TECDTLVCLS EMRAHIRTCQ KYIDKYGPLQ ELGETATRCV CPFCQKELDE 151 200 bmy_13025T0/1-248 DSLLDHCITH HRSERRP-FC PLCHLVPNEN PSSFNGSLIR HLQVSHTLFY ENSP00000217740/1-232 DSLLDHCITH HRSERRPVFC PLCRLIPDEN PSSFSGSLIR HLQVSHTLFY ENSBTAP00000004048/1-232 DGLLDHCINH HRSERRPVFC PLCRLVPNEN RSSFNGSLIR HLQVSHTLFY BACU001575/1-232 DSLLDHCITH HRSERRPVFC PLCRLVPNEN PSSFNGSLIR HLQVSHTLFY ENSTTRP00000010360/1-232 DSLLDHCITH HRSERRPVFC PLCRLVPNEN PGSFNGSLIR HLQVSHTLFY 201 250 bmy_13025T0/1-248 DDFIDFNIIE EALIQRVLDR SLLEYEYFSK TYTEKLDWES TVKIVPGREK ENSP00000217740/1-232 DDFIDFNIIE EALIRRVLDR SLLEYVNHSN TT-------- ---------- ENSBTAP00000004048/1-232 DDFLDFNIIE EALIQRVLDR SLLEYVNHSN TA-------- ---------- BACU001575/1-232 DDFIDFNIIE EALIQRVLDR SLLEYVNHSN TT-------- ---------- ENSTTRP00000010360/1-232 DDFIDFNIIE EALIQRVLDR SLLEYVNHSN TT-------- ---------- 251 300 bmy_13025T0/1-248 EELESENAEV QIKKVIICWT EVKSSSSLIH FPFCA ENSP00000217740/1-232 ---------- ---------- ---------- ----- ENSBTAP00000004048/1-232 ---------- ---------- ---------- ----- BACU001575/1-232 ---------- ---------- ---------- ----- ENSTTRP00000010360/1-232 ---------- ---------- ---------- -----