KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:56 2014 Check: 00 .. Name: bmy_18170T0/1-567 Len: 633 Check: 394 Weight: 1.00 Name: ENSP00000371221/1-621 Len: 633 Check: 3818 Weight: 1.00 Name: BACU000144/1-539 Len: 633 Check: 4866 Weight: 1.00 Name: ENSBTAP00000004052/1-610 Len: 633 Check: 3375 Weight: 1.00 // 1 50 bmy_18170T0/1-567 MQRWGSIR-- ---------- ---------- ---------- -------LLH ENSP00000371221/1-621 MEHIRTTKVE QVKLLDRFST SNKSLTGTLY LTATHLLFID SHQKETWILH BACU000144/1-539 MEHIRTTKVE QVKLLDRFST SNKSLTGTLY LTATHLLFID SHQKETWILH ENSBTAP00000004052/1-610 MEHIRTTKVE QVKLLDRFST SNKSLTGTLY LTATHLLFID AHQKETWILH 51 100 bmy_18170T0/1-567 HHIALVEKLA LTTSGCPLVI QCKNFRIVHF IVPRERDCHD IYNSLLQLSK ENSP00000371221/1-621 HHIASVEKLA LTTSGCPLVI QCKNFRTVHF IVPRERDCHD IYNSLLQLSK BACU000144/1-539 HHIALVEKLA LTTSGCPLVI QCKNFRIVHF IVPRERDCHD IYNSLLQLSK ENSBTAP00000004052/1-610 HHIASVEKLA LTTSGCPLVI QCKNFRTVHF IVPRERDCHD IYNSLLQLSK 101 150 bmy_18170T0/1-567 QAKYEDLYAF SYNPKQNDSE RLRGWQLIDL AEEYKRMGLP NSNWQLSDAN ENSP00000371221/1-621 QAKYEDLYAF SYNPKQNDSE RLQGWQLIDL AEEYKRMGVP NSHWQLSDAN BACU000144/1-539 QAKYEDLYAF SYNPKQNDSE RLRGWQLVDL AEEYKRMGLP NSNWQLSDAN ENSBTAP00000004052/1-610 QAKYEDLYAF SYNPKQNDAE RLRGWELIDL AEEYKRMGVP NSNWQLSDAN 151 200 bmy_18170T0/1-567 RDYKICETYP RELYVPRIAS KPIIVGSSKF RSKGRFPVLS YYHQNKEAAI ENSP00000371221/1-621 RDYKICETYP RELYVPRIAS KPIIVGSSKF RSKGRFPVLS YYHQDKEAAI BACU000144/1-539 RDYKICETYP RELYVPRIAS KPIIVGSSKF RSKGRFPVLS YYHQNKEAAI ENSBTAP00000004052/1-610 REYKICETYP RELYVPRIAS KPIIVGSSKF RSKGRFPVLS YYHQSKEAAI 201 250 bmy_18170T0/1-567 CRCSQPLSGF SARCLEDEHL LQAISKANPA NRYMYVMDTR PRHRMQSWWA ENSP00000371221/1-621 CRCSQPLSGF SARCLEDEHL LQAISKANPV NRYMYVMDTR PK-------- BACU000144/1-539 CRCSQPLSGF SARCLEDEHL LQAISKANPA NRYMYVMDTR PR-------- ENSBTAP00000004052/1-610 CRCSQPLSGF SARCLEDEHL LQAISKANPA NRYMYVMDTR PR-------- 251 300 bmy_18170T0/1-567 TQKDIGRIIV RISSKIWNDK ----KIR-ES DGKKRLNALA NRAAG--KVN ENSP00000371221/1-621 ----LNAMAN RAAGKGYENE DNYSNIRFQF VGIENIHVMR SSLQKLLEVN BACU000144/1-539 ----LNAMAN RAAGKGYENE DNYSNIRFQF VGIENIHVMR SSLQKLLE-- ENSBTAP00000004052/1-610 ----LNAMAN RAAGKGYENE DNYSNIRFQF VGIENIHVMR SSLQKLLEVN 301 350 bmy_18170T0/1-567 GTKGLSVSDF YSGLENAGWL RHIKAVMDAA IFLAKAIMVE NASVLVHCSD ENSP00000371221/1-621 GTKGLSVNDF YSGLESSGWL RHIKAVMDAA IFLAKAITVE NASVLVHCSD BACU000144/1-539 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004052/1-610 GTKGLSVNDF YSGLESSGWL RHIKAVMDAA IFLAKAIAAE SASVLVHCSD 351 400 bmy_18170T0/1-567 GWDRTSQ--- ---------- -------VLI EKDWISFGHK YSDRCGHLDG ENSP00000371221/1-621 GWDRTSQVCS LGSLLLDSYY RTIKGFMVLI EKDWISFGHK FSERCGQLDG BACU000144/1-539 ---------- ---------- ---------- EKDWISFGHK YSDRCGHLDG ENSBTAP00000004052/1-610 GWDRTSQVCS LGSLLLDPYY RTIRGFMVLI EKDWISFGHK FSERCGHLDG 401 450 bmy_18170T0/1-567 DPKEVSPVFT QFLECVWHLT EQFPQAFEFN EAFLLQIHEH IHSCQFGNFI ENSP00000371221/1-621 DPKEVSPVFT QFLECVWHLT EQFPQAFEFS EAFLLQIHEH IHSCQFGNFL BACU000144/1-539 DPKEVSPVFT QFLECVWHLT EQFPQAFEFN EAFLLQIHEH IHSCQFGNFI ENSBTAP00000004052/1-610 DPKEVSPVFT QFLECVWHLT EQFPQAFEFN EAFLLQIHEH IHSCQFGNFI 451 500 bmy_18170T0/1-567 GNCQKEREEL KLKEKTYSLW PFLLHDQKKY FNPLYSSTSQ KLAVLEPNTV ENSP00000371221/1-621 GNCQKEREEL KLKEKTYSLW PFLLEDQKKY LNPLYSSESH RFTVLEPNTV BACU000144/1-539 GNCQKEREEL KLKEKTYSLW PFLLHDQKKY FNPLYSSTSQ KLAVLEPNTV ENSBTAP00000004052/1-610 GNCQKEREEL KLKEKTYSLW PFLLDDQKKY LNPLYSSQSQ KSAVLEPNTV 501 550 bmy_18170T0/1-567 SFNFKFWRNM YHQFDRTLHP RQSVFNIIMN MNEQNKQLQK DVKDLESQIK ENSP00000371221/1-621 SFNFKFWRNM YHQFDRTLHP RQSVFNIIMN MNEQNKQLEK DIKDLESKIK BACU000144/1-539 SFNFKFWRNM YHQFDRTLHP RQSVFNIIMN MNEQNKQLQK DVKDLESQIK ENSBTAP00000004052/1-610 SFNFKFWRNM YHQFDRTLHP RQSVFNIIMN MNEQNKQLEK DIKDLESA-- 551 600 bmy_18170T0/1-567 QHKNKQTDGV LTKELLNSVR PESPALKTSL CLKEQTPLPV KDALRTVEGS ENSP00000371221/1-621 QRKNKQTDGI LTKELLHSVH PESPNLKTSL CFKEQTLLPV NDALRTIEGS BACU000144/1-539 QHKNKQTDGV LTKELLNSVR PESPALKTSL CLKEQTLLPV KDALRTVEGS ENSBTAP00000004052/1-610 --------GL LLVG-SQSVR PESPALKATL SLKEQALLPV NNVLRTIEGS 601 650 bmy_18170T0/1-567 SPADNRYSEY ADEFSKAEPA AVSSEYGVAR MTC ENSP00000371221/1-621 SPADNRYSEY AEEFSKSEPA VVSLEYGVAR MTC BACU000144/1-539 SPADNRYSEY ADEFSKAEPA VVSSEYGVAR MTC ENSBTAP00000004052/1-610 SPADNRYSEY ADEFSKAEPA VVSLEYGVAR MTC