KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:58 2014 Check: 00 .. Name: ENSTTRP00000006663/1-503 Len: 509 Check: 9537 Weight: 1.00 Name: ENSBTAP00000004062/1-502 Len: 509 Check: 1254 Weight: 1.00 Name: bmy_21425T0/1-450 Len: 509 Check: 8267 Weight: 1.00 Name: BACU009587/1-506 Len: 509 Check: 3256 Weight: 1.00 // 1 50 ENSTTRP00000006663/1-503 MNAESPLERE EKAASEPEAG AMVEKRASAR AASGSSLQGF GRPSVHHAAL ENSBTAP00000004062/1-502 MNAEPP---E EKAASEAEAG AMPEKRAGSR AAGGNSLQGF GRPSVYHAAI bmy_21425T0/1-450 ---------- ---------- ---------- ---------- ------MLVI BACU009587/1-506 MNAESPLERE EKAASEPEAG AMLEKRAGAR AASGSSLQGF GRPSVHHAAI 51 100 ENSTTRP00000006663/1-503 VIF---LEFF AWGLLTTPML TVLHETFPQH TFLMNGLIQG VKGLLSFLSA ENSBTAP00000004062/1-502 VIF---LEFF AWGLLTTSML TVLHETFPQH TFLMNGLIQG VKGLLSFLSA bmy_21425T0/1-450 VILGTNIEVS SF----ESKE KVLHETFPQH TFLMNGLIQG VKGLLSFLSA BACU009587/1-506 VIF---LEFF AWGLLTTPML TVLHETFPQH TFLMNGLIQG VKGLLSFLSA 101 150 ENSTTRP00000006663/1-503 PLIGALSDVW GRKPFLLGTV FFTCFPIPLM RISPWWYFAM ISMSGVFSVT ENSBTAP00000004062/1-502 PLIGALSDVW GRKPFLLGTV FFTCFPIPLM RISPWWYFAM ISISGVFSVT bmy_21425T0/1-450 PLIGALSDVW GRKPFLLGTV FFTCFPIPLM RISPWWYFAM ISMSGVFSVT BACU009587/1-506 PLIGALSDVW GRKPFLLGTV FFTCFPIPLM RISPWWYFAM ISMSGVFSVT 151 200 ENSTTRP00000006663/1-503 FSVIFAYVAD VTQEHERSTA YGWVSATFAA SLVSSPAIGA YLSASYGDSL ENSBTAP00000004062/1-502 FSVIFAYVAD VTQEHERSTA YGWVSATFAA SLVSSPAIGA YLSASYGDSL bmy_21425T0/1-450 FSVIFAYVAD VTQEHERSTA YGWVSATFAA SLVSSPAIGA YLSASYGDSL BACU009587/1-506 FSVIFAYVAD VTQEHERSTA YGWVSATFAA SLVSSPAIGA YLSASYGDSL 201 250 ENSTTRP00000006663/1-503 VVLVATVVAL LDICFILLAV PESLPEKMRP LSWGAQISWK QADPFASLKK ENSBTAP00000004062/1-502 VVLVATVVAL LDICFILLAV PESLPEKMRP LSWGARISWK QADPFASLKK bmy_21425T0/1-450 VVLVATVVAL LDICFILLAV PESLPEKMRP LSWGAQISWK QADPFASLKK BACU009587/1-506 VVLVATVVAL LDICFILLAV PESLPEKMRP LSWGAQISWK QADPFASLKK 251 300 ENSTTRP00000006663/1-503 VGKDSTVLLI CITVFLSYLP EAGQYSSFFL YLRQVIGFGS VKIAAFIAMV ENSBTAP00000004062/1-502 VGKDSTILLI CITVFLSYLP EAGQYSSFFL YLRQVIGFGS IKIAAFIAMV bmy_21425T0/1-450 VGKDSTVLLI CITVFLSYLP EAGQYSSFFL YLRQVIGFGS VKIAAFIAM- BACU009587/1-506 VGKDSTVLLI CITVFLSYLP EAGQYSSFFL YLRQVIGFGS VKIAAFIAMV 301 350 ENSTTRP00000006663/1-503 GILSIVAQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXMMWA ENSBTAP00000004062/1-502 GILSIVAQTV FLTSLMRSLG NKNTVLLGLG FQMFQLAWYG FGSQAWMMWA bmy_21425T0/1-450 --------TV FLTILMRSLG NKNTVLLGLG FQMFQLAWYG FGSQAWMMWA BACU009587/1-506 GILSIVAQTV FLTILMRSLG NKNTVLLGLG FQMFQLAWYG FGSQAWMMWA 351 400 ENSTTRP00000006663/1-503 AGTVAAMSSI TFPAVSALVS RNAESDQQGV AQGIITGIRG LCNGLGPALY ENSBTAP00000004062/1-502 AGIVAAVSSI TFPAVSTLVS QNADSNQQGV AQGIITGIRG LCNGLGPALY bmy_21425T0/1-450 AGTVAAMSSI TFPAVSALVS RNAESDQQGV AQGIITGIRG LCNGLGPALY BACU009587/1-506 AGTVAAMSSI TFPAVSALVS RNAESDQQGV AQGIITGIRG LCNGLGPALY 401 450 ENSTTRP00000006663/1-503 GFIFYMFHVE LTELELELNS NNAALQ---T XGPPFLFGAC IVLMSFLVAL ENSBTAP00000004062/1-502 GFIFYMFHVE LTELEPELIS NNAALQGAVI PGPPFLFGAC IVFMSFLVAV bmy_21425T0/1-450 GFIFYMFHVE LTELELELNS NNAALQGAVI PGPPFLFGAC IVLMSFLVAL BACU009587/1-506 GFIFYMFHVE LTELELELNS NNAALQGAVI PGPPFLFGAC IVLMSFLVAL 451 500 ENSTTRP00000006663/1-503 FIPEYSKGSG IKKHNNSISG SLTNTIERGS DEDIEPLLQD SSIWELSSFE ENSBTAP00000004062/1-502 FIPEYSKG-G IQKHSNSISG SLANTPERGS DEDIEPLLQD SSIWELSSLE bmy_21425T0/1-450 FIPEYSKGSG IQKHSNSISG SLTNTPERGS DEDIEPLLQD SSIWELSSFE BACU009587/1-506 FIPEYSKGSG IQKHSNSISG SLTDPPERGS DEDIEPLLQD SSIWELSSFE 501 550 ENSTTRP00000006663/1-503 EPGNQCTEL ENSBTAP00000004062/1-502 EPGHQCTEL bmy_21425T0/1-450 EPGNQCTEL BACU009587/1-506 EPGNQCTEL