KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:22:59 2014 Check: 00 .. Name: bmy_00884T0/1-269 Len: 488 Check: 4223 Weight: 1.00 Name: BACU000285/1-331 Len: 488 Check: 6309 Weight: 1.00 Name: ENSTTRP00000011734/1-488 Len: 488 Check: 7164 Weight: 1.00 Name: ENSBTAP00000004068/1-488 Len: 488 Check: 6632 Weight: 1.00 // 1 50 bmy_00884T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU000285/1-331 MPKVKALQCA LALEIRSVTC PGVVLKDKED IYLSICVFGQ YKKTQCVPAN ENSTTRP00000011734/1-488 MPKVKALQCA LALEIRCVTC PGVVLKDKED IYLSICVFGQ YKKTQCVPAS ENSBTAP00000004068/1-488 MPKVKALQCA LALEIRSVTC PGVVLKDKED IYLSICVFGQ YKKTQCVPAN 51 100 bmy_00884T0/1-269 ---------- ---------- -------MEF LSVWYK---- ---------- BACU000285/1-331 FPLVFNARMV FEKVFPEAVD PGDVVAQLEY DTALFELIQL VPPVGETLST ENSTTRP00000011734/1-488 FPLVFNARMV FEKVFPEAVD PGDVVAQLEY DTALFELIQL VPPVGETLST ENSBTAP00000004068/1-488 FPLVFNARMV FEKVFPEAVD PGDVVAQLEY DTALFELIQL VPPVGETLST 101 150 bmy_00884T0/1-269 ---------- ---------- ---------- ----QEVGKK ELYSIAEIGD BACU000285/1-331 YDENTRDFMF PGPNQISGHH DSNRQVTMRR ISCLRGIAPK LEFSTTSVIT ENSTTRP00000011734/1-488 YDENTRDFMF PGPNQISGHH DSNRQATMRK ISGLHGIAPK LEFSTTSVIT ENSBTAP00000004068/1-488 YDENTRDFMF PGPNQISGHH DSNRQVTMRR ISGLRGIAPK LEFSTTSVIT 151 200 bmy_00884T0/1-269 DGFIGSK--- ---------- -VEKSHGRLQ IRTPRSQKKK SKSPERNKYC BACU000285/1-331 ECLISSRKCH TQDKFIHHTA PVEKSHGRLQ TRTPRSQKKK SKSPERNKYC ENSTTRP00000011734/1-488 ECLISSRKCH TQDKFIHHTA PVEKSHGRLQ TRTSRSQKKN SKSPERNKYC ENSBTAP00000004068/1-488 ECLISSRKCR TQDKFVYHTA PVEKPHSRLQ NRTSRSQKKK SKSPERNKYC 201 250 bmy_00884T0/1-269 INAKNYEQPT ISSKSHSPSP YTKRRMCELS EDTRRRLAHL NLGPYEFKKE BACU000285/1-331 INAKNYEQPT ISSKSHSPSP YTKRRMCELS EDTRQRLAHL NLGPYEFKKE ENSTTRP00000011734/1-488 INAKNYEQPT ISSKSHSPSP YTKRRMCELS EDTRQRLAHL NLGPYEFKKE ENSBTAP00000004068/1-488 INAKNYEQPT ISSKSHSPSP YTKRRMCELS EDTRRRLAHL NLGPYEFKKE 251 300 bmy_00884T0/1-269 TDKPPFVIRH VDPPSPRADA LFGSSGRDCE RDGWSRLHND HSHLGCYRPK BACU000285/1-331 TDKPPFVIRH VDPPSPRADA LFGSSGRDCE RDGWSRLHND HSHLGCYRPK ENSTTRP00000011734/1-488 TDKPPFVIRH VDPPSPRADA LFGSSGRDCE RNGWSRLHND HSHLRCYRPK ENSBTAP00000004068/1-488 TDKPPFVIRH VDPPSPRADA LFGSPGRDCE RDGWSRLHND HSHLGCYRPK 301 350 bmy_00884T0/1-269 DYKVIRTPHG RDFDDSLERC DDYLSSR--- ---------- ---------- BACU000285/1-331 DYK----PSC RCMGPT---- ---------- ---------- ---------- ENSTTRP00000011734/1-488 DYKVIRTPHG RDFDDSLERY DDYLSSRSRS KPQHSSRTSL VHSAPSTMPK ENSBTAP00000004068/1-488 DYKVIRTPHG RDFDESLERC EDYLSSRSCS KPQHSARTLL VHSAPSTMPK 351 400 bmy_00884T0/1-269 ---------- -----FHSDW CSPSNCDEIH DRM--FLFSV KFYLERVQDE BACU000285/1-331 ---------- -----SSSQW ---------- ---------- ---------- ENSTTRP00000011734/1-488 HSPSPVLNRA SLRERFHSDW CSPSNCDEIH DRVKNVLKSH QAHQRHLYDE ENSBTAP00000004068/1-488 HSPSPVLNRA SLRERFHSDW CSPSNCDEIH DRVKNVLKSH QAHQRHLYDE 401 450 bmy_00884T0/1-269 RDPEKEDELE LKRGLLYRDS AYDSDPEYRG LPIQVARSHI ----FGASRI BACU000285/1-331 ---------- ---------- ---------- ------TLHV -------NSV ENSTTRP00000011734/1-488 RDPEKEDELE LKRGLLYRDS AYDSDPEYSS FQQPRGTLHL DDGEYWSNRA ENSBTAP00000004068/1-488 RDPEKEDELE LKRGLLYRDS AYDSDPEYSS FQRPRGTLHL DDGEYWSNRA 451 500 bmy_00884T0/1-269 RK-------- ---------- ---------- -------- BACU000285/1-331 DPFQGAA--- ---------- ---------- -------- ENSTTRP00000011734/1-488 ASYKGKSYRP IFENSMDKMY RSLYKKACSS VSHTQEGC ENSBTAP00000004068/1-488 ASYKGKSHRP IFENSMDKIY RNLYKKACSS VSHTQESF