KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:00 2014 Check: 00 .. Name: bmy_12952T0/1-221 Len: 341 Check: 7908 Weight: 1.00 Name: BACU017585/1-325 Len: 341 Check: 6605 Weight: 1.00 Name: ENSP00000364008/1-325 Len: 341 Check: 1491 Weight: 1.00 Name: ENSBTAP00000004081/1-325 Len: 341 Check: 2250 Weight: 1.00 Name: ENSTTRP00000006223/1-325 Len: 341 Check: 1537 Weight: 1.00 // 1 50 bmy_12952T0/1-221 ----MDSHRC FSL------- ---------- ---------- ---------- BACU017585/1-325 ---------- ------MLYF QLVIMAGTVL LAYYFECTDT FQVHIQGFFC ENSP00000364008/1-325 MAVGNNTQRS YSIIPCFIFV ELVIMAGTVL LAYYFECTDT FQVHIQGFFC ENSBTAP00000004081/1-325 MAVGNNTQRS YSIIPCFIFV ELVIMAGTVL LAYYFECTDT FQVHIQGFFC ENSTTRP00000006223/1-325 MAVGNNTQRS YSIIPCFIFV ELVIMAGTVL LAYYFECTDT FQVHIQGFFC 51 100 bmy_12952T0/1-221 ---------- ---------- ---------- ---------- ---------- BACU017585/1-325 QDGDLMKPYP GTEEESFITP LVLYCVLAAS PTAIIFIGEI SMYFIKSTRE ENSP00000364008/1-325 QDGDLMKPYP GTEEESFITP LVLYCVLAAT PTAIIFIGEI SMYFIKSTRE ENSBTAP00000004081/1-325 QDGDLMKPYP GTEEESFITP LLLYCVLAAT PTAIIFIGEI SMYFIKSTRE ENSTTRP00000006223/1-325 QDGDLMKPYP GTEEESFITP LVLYCVLAAT PTAIIFIGEL SMYFIKSTRE 101 150 bmy_12952T0/1-221 ----RDKTSR WGMSSFL--I ILNLL--IGV FAFGLFATDI FVNAGQVVTG BACU017585/1-325 SLIAQEKTIL TGECCYLNPL LRRIIRFIGV FAFGLFATDI FVNAGQVVTG ENSP00000364008/1-325 SLIAQEKTIL TGECCYLNPL LRRIIRFTGV FAFGLFATDI FVNAGQVVTG ENSBTAP00000004081/1-325 SLIAQEKTIL TGECCYLNPL LRRIIRFIGV FAFGLFATDI FVNAGQVVTG ENSTTRP00000006223/1-325 SLIAQEKTIL TGECCYLNPL LRRIVRFIGV FAFGLFATDI FVNAGQVVTG 151 200 bmy_12952T0/1-221 HLTPYFLTVC KPNYTSADCP AHHQFINNGN VCTGDLEVIE KARRSFPSKH BACU017585/1-325 HLTPYFLTVC KPNYTSADCP AHQQFINNGN VCTGDLEVIE KARRSFPSKH ENSP00000364008/1-325 HLTPYFLTVC KPNYTSADCQ AHHQFINNGN ICTGDLEVIE KARRSFPSKH ENSBTAP00000004081/1-325 HLTPYFLTVC KPNYTSTDCR AHHQFINNGN ICTGDLEVIE KARRSFPSKH ENSTTRP00000006223/1-325 HLTPYFLTVC KPNYTSADCR AHHQFINNGN ICTGDLEVIE KARRSFPSKH 201 250 bmy_12952T0/1-221 AALSIYSALY ATMYITSTIK TKSSRLAKPV LCLGTLCTAF LMGLNRVSEY BACU017585/1-325 AALSIYSALY ATMYITSTIK TKSSRLAKPV LCLGTLCTAF LMGLNRVSEY ENSP00000364008/1-325 AALSIYSALY ATMYITSTIK TKSSRLAKPV LCLGTLCTAF LTGLNRVSEY ENSBTAP00000004081/1-325 AALSIYSALY ATMYITSTIK TKSSRLAKPV LCLGTLCTAF LTGLNRVSEY ENSTTRP00000006223/1-325 AALSIYSALY ATMYITSTIK TKSSRLAKPV LCLGTLCTAF LMGLNRVSEY 251 300 bmy_12952T0/1-221 RNHCSDVIAG FILGTAVALF LGMCVVHNFK GTQGSPSKPK PEDPRGVPLM BACU017585/1-325 RNHCSDVIAG FILGTAVALF LGMCVVHNFK GTQGSPSKPK PEDPRGVPLM ENSP00000364008/1-325 RNHCSDVIAG FILGTAVALF LGMCVVHNFK GTQGSPSKPK PEDPRGVPLM ENSBTAP00000004081/1-325 RNHCSDVIAG FILGTAVALF LGMCVVHNFK GTQGSPSKPK PEDPRGVPLM ENSTTRP00000006223/1-325 RNHCSDVIAG FILGTAVALF LGMCVVHNFK GTQGSPSKPK PEDPRGVPLM 301 350 bmy_12952T0/1-221 AFPRIESPLE TLSAQPVNAG ---------- ---------- - BACU017585/1-325 AFPRIESPLE TLSAQKEYQS IYNLEPQSNS LTLWLLIVPE F ENSP00000364008/1-325 AFPRIESPLE TLSAQNHSAS MTEVT----- ---------- - ENSBTAP00000004081/1-325 AFPRIESPLE TLSAQNHSAS MTEVT----- ---------- - ENSTTRP00000006223/1-325 AFPRIESPLE TLSAQNHSAS MTEVT----- ---------- -