KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:00 2014 Check: 00 .. Name: ENSTTRP00000015956/1-554 Len: 708 Check: 8908 Weight: 1.00 Name: BACU016548/1-587 Len: 708 Check: 8700 Weight: 1.00 Name: ENSP00000411253/1-557 Len: 708 Check: 1556 Weight: 1.00 Name: bmy_11075T0/1-557 Len: 708 Check: 958 Weight: 1.00 Name: ENSBTAP00000004087/1-557 Len: 708 Check: 553 Weight: 1.00 // 1 50 ENSTTRP00000015956/1-554 MDESGVLLWV KAEPFIVGAL -VPPPSKFSL HYL--ISTYV RTRATEGGYP BACU016548/1-587 MDQSGVLLWV KAEPFIVGAL QVPPPSKFSL HYLRKMSTYV RTRATEGGYP ENSP00000411253/1-557 MDQSRVLLWV KAEPFIVGAL QVPPPSKFSL HYLRKISTYV QIRATEGAYP bmy_11075T0/1-557 MDQSGVLLWV KAEPFIVGAL QVPPPSKFSL HYLRKISTYV RTRATEGGYP ENSBTAP00000004087/1-557 MDQSRVLLWV KAEPFIVGAL QIPPPSKFSL HYLRKISTYV RTRTIEGGYP 51 100 ENSTTRP00000015956/1-554 RLSWXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU016548/1-587 RLSWSTWRHI ACGKLQLAKG LAWLYFEIFD SLAVKTPKER LEWSEILSNC ENSP00000411253/1-557 RLYWSTWRHI ACGKLQLAKD LAWLYFEIFD SLSMKTPEER LEWSEVLSNC bmy_11075T0/1-557 RLSWSTWRHI ACGKLQLAKD LAWLYFEIFD SLAVKTPKER LEWSEILSNC ENSBTAP00000004087/1-557 RLSWSTWRHI ACGKLQLAKD LAWLYFEMFD SLAMKTPEER LEWSEILSNC 101 150 ENSTTRP00000015956/1-554 XXXXXVEKQR NQLSVDTLQF LLFLYIQQLN KVSLRTSLIG EEWPSPRHRS BACU016548/1-587 MSEDEVEKQR NQ-------- ---------- ---------- ---------- ENSP00000411253/1-557 MSEEEVEKQR NQLSVDTLQF LLFLYIQQLN KVSLRTSLIG EEWPSPRNKS bmy_11075T0/1-557 MSEDEVEKQR NQLSVDTLQF LLFLYIQQLN KVSLRTSLIG EEWPSPRHRS ENSBTAP00000004087/1-557 MSEDEVEKQR NQLSVDTLQF LLFLHIQQLN KVSLRTSLIG EEWPSPRHRA 151 200 ENSTTRP00000015956/1-554 QSPDLTEKSS CHNKNWNDYS HQAFVCDHLS DLLELLVDPE QLTASFHSTH BACU016548/1-587 ---------- ----NWNDYS HQAFVCDHLS DLLELLVDPE QLTASFHSTH ENSP00000411253/1-557 QSPDLTEKSN CHNKNWNDYS HQAFVYDHLS DLLELLLDPK QLTASFHSTH bmy_11075T0/1-557 QSPDLTEKSS CHNKNWNDYS HQAFVCDHLS DLLELLVDPE QLTASFHSTH ENSBTAP00000004087/1-557 QSPDLTEKSS CHNKNWNDYS HQAFVCDHLS DLLELLLDPE QLTASFHSTH 201 250 ENSTTRP00000015956/1-554 SSLVSREAVV ALSFLIEGTV SGARKIYPLY ELALWQPLHA ESGFSKTSKA BACU016548/1-587 SSLVSREAVV ALSFLIE--- ---------- ---------- ---------- ENSP00000411253/1-557 SSLVSREAVV ALSFLIEGTI SRARKIYPLH ELALWQPLHA DSGFSKISKT bmy_11075T0/1-557 SSLVSREAVV ALSFLIEGTV SGARKIYPLY ELALWQPLHA ESGFSKTSKA ENSBTAP00000004087/1-557 SSLVSREAVV ALSFLIEGTV SGARKIYPLY ELALWHPLHA ETGFSKASKT 251 300 ENSTTRP00000015956/1-554 FSFYKLEAWL RASLTGNPFG VSACLKSGKK LAWAHQVEGT TKRAKIACNT BACU016548/1-587 ---------- ---------- ---------- ------VEGT TKRAKIACNT ENSP00000411253/1-557 FSFYKLETWL RSCLTGNPFG TSACLKSGKK LAWAHQVEGT TKRAKIACNT bmy_11075T0/1-557 FSFYKLEAWL RACLTENPFG TSACLKSGKK LAWAHQVEGT TKRAKIACNT ENSBTAP00000004087/1-557 FSFYKLEAWL RTCLTGNPFG TSACLKSGKK LAWAHQVEGT TKRAKIACNT 301 350 ENSTTRP00000015956/1-554 HVAPRMHRLV VMSHVYKQTL AKSSDTLVGA HVKIHRCNET FVYLLSPLRS BACU016548/1-587 HVAPRMHRLV VMSQVYKQTL AKSSDTLVGA HVKIHRCNET FVYLLSPLRS ENSP00000411253/1-557 HVAPRMHRLV VMSQVYKQTL AKSSDTLAGA HVKIHRCNES FIYLLSPLRS bmy_11075T0/1-557 HVAPRMHRLV VMSQVYKQTL AKSSDTLVGA HVKIHRCNET FVYLLSPLRS ENSBTAP00000004087/1-557 HVAPRMHRMV VMSQVYKQTL AKSSDTLVGA HVKIHRCNES FIYLLSPLRS 351 400 ENSTTRP00000015956/1-554 VTIEKCRNST FILGPVQTAV HLHSCDNVKV IAVCHRLSIS STTGCIFHIL BACU016548/1-587 VTIEKCRNST FILGPVQTAL HLHSCDNVKV IAVCHRLSIS STTGCIFHIL ENSP00000411253/1-557 VTIEKCRNSI FVLGPVGTTL HLHSCDNVKV IAVCHRLSIS STTGCIFHVL bmy_11075T0/1-557 VTIEKCRNST FILGPVQTAL HLHSCDNVKV IAVCHRLSIS STTGCIFHIL ENSBTAP00000004087/1-557 VTIEKCRNST FVLGPVQTAL HLHSCDNVKV IAVCHRLSIS STTGCIFHIL 401 450 ENSTTRP00000015956/1-554 TPTRPLILSG NQRVTFAPFH THYPMLEDHM ARTGLATVPN YWDNPMIVCR BACU016548/1-587 TPTRPLILSG NQRVTFAPFH THYPMLEDHM ARTGLATVPN YWDNPMIVCR ENSP00000411253/1-557 TPTRPLILSG NQTVTFAPFH THYPMLEDHM ARTGLATVPN YWDNPMVVCR bmy_11075T0/1-557 TPTRPLILSG NQRVTFAPFH THYPMLEDHM ARTGLATVPN YWDNPIIVCR ENSBTAP00000004087/1-557 TPTRPLILSG NQRVTFAPFH THYPMLEDHM ARTGLATVPN YWDNPMIVCR 451 500 ENSTTRP00000015956/1-554 ENSSTSVFRL LAPCEFYVFT IPFEMEGDTT EIPGGLPSAY QKALGQREKK BACU016548/1-587 ENSSTSVFRL LAPCEFYVFI IPFEMEGDTT EIPGGLPSAY QKALGQREKK ENSP00000411253/1-557 ENSDTRVFQL LPPCEFYVFI IPFEMEGDTT EIPGGLPSVY QKALGQREQK bmy_11075T0/1-557 ENSSTSVFRL LAPCEFYVFI IPFEMEGDTT EIPGGLPSAY QKALGQREKK ENSBTAP00000004087/1-557 ENSSPSVFRL LPPCEFYVFI IPFEMEGDTT EIPGGLPSAY QKALSQREKK 501 550 ENSTTRP00000015956/1-554 IQTWQKTVKE ARLTK----- ---------- ---------- ---------- BACU016548/1-587 IQTWQKTVKE ARLTNYSWIS ALGKPIYAPK MSKAGTKITF FEDKNFQGRH ENSP00000411253/1-557 IQIWQKTVKE AHLTK----- ---------- ---------- ---------- bmy_11075T0/1-557 IQTWQKTVKE ARLTK----- ---------- ---------- ---------- ENSBTAP00000004087/1-557 IQVWQKTVKE ARLTK----- ---------- ---------- ---------- 551 600 ENSTTRP00000015956/1-554 ---------- ---------- ---------- ---------- ---------- BACU016548/1-587 YDSDCDCADF HMYLSRCNSI RVEGGTWAVY ERPNFAGYMY VLPRGEYSEY ENSP00000411253/1-557 ---------- ---------- ---------- ---------- ---------- bmy_11075T0/1-557 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004087/1-557 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000015956/1-554 ---------- --------DQ RKQFQVLVEN K--------- ---------- BACU016548/1-587 QHWMGLNDRL SSCRAVHLSS GGQYKIQIFE KGDFNGQMYE TTEDCPSIME ENSP00000411253/1-557 ---------- --------DQ RKQFQVLVEN K--------- ---------- bmy_11075T0/1-557 ---------- --------DQ RKQFQVLVEN K--------- ---------- ENSBTAP00000004087/1-557 ---------- --------DQ RKQFQVLVEN K--------- ---------- 651 700 ENSTTRP00000015956/1-554 ---------- --------FY EWLINTGHRQ QLDSLV---- -------PPA BACU016548/1-587 QFHMREVHSC KVLEGAWVFY ELPNYRGRQY LLDKKEYRKP IDWGAASPAI ENSP00000411253/1-557 ---------- --------FY EWLINTGHRQ QLDSLV---- -------PPA bmy_11075T0/1-557 ---------- --------FY EWLINTGHRQ QLDSLV---- -------PPA ENSBTAP00000004087/1-557 ---------- --------FY EWLINTGHRQ QLDSLV---- -------PPA 701 750 ENSTTRP00000015956/1-554 AGSKQAAG BACU016548/1-587 QSFRRIVE ENSP00000411253/1-557 AGSKQAAG bmy_11075T0/1-557 AGSKQAAG ENSBTAP00000004087/1-557 AGSKQAAG