KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:09 2014 Check: 00 .. Name: ENSP00000375863/1-856 Len: 859 Check: 5673 Weight: 1.00 Name: ENSBTAP00000004114/1-858 Len: 859 Check: 5465 Weight: 1.00 Name: BACU002045/1-759 Len: 859 Check: 7405 Weight: 1.00 Name: ENSTTRP00000006725/1-765 Len: 859 Check: 4430 Weight: 1.00 Name: bmy_11307T0/1-858 Len: 859 Check: 5951 Weight: 1.00 // 1 50 ENSP00000375863/1-856 MDVRRLKVNE LREELQRRGL DTRGLKAELA ERLQAALEAE EPDDERELDA ENSBTAP00000004114/1-858 MDVRRLKVNE LREELQRRGL DTRGLKAELA ERLQAALEAE EPDDERELEA BACU002045/1-759 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006725/1-765 ---------- ---------- ---------- ---------- ---------- bmy_11307T0/1-858 MDVRRLKVNE LREELQRRGL DTRGLKAELA ERLQAALEAE EPDDERELEA 51 100 ENSP00000375863/1-856 DDEPGRPGHI NEEVETEGGS ELEGTAQPPP PGLQPHAEPG GYSGPDGHYA ENSBTAP00000004114/1-858 DDEPGRPGHN NEEVETEGGS ELEGTAQPPP PGLQPHPEPG GYSGPDGHYV BACU002045/1-759 ---------- ---------- ---------- ---------- ---------V ENSTTRP00000006725/1-765 ---------- ---------- ---------- ---------- --SGPDGHYV bmy_11307T0/1-858 DDEPGRPGHN NEEVETEGGS ELEGTAQPPP PGLQPHPEPG GYSGPDGHYV 101 150 ENSP00000375863/1-856 MDNITRQNQF YDTQVIKQEN ESGYERRPLE ME-QQQAYRP -EMKTEMKQG ENSBTAP00000004114/1-858 MDNITMQNQF YETQVIKQEN ESGYERRPLE IDQQQQAYRP -EVKTEMKQE BACU002045/1-759 MDNITMQNQF YETQVIKKEN ESGYERRTLE MDQQQQAYRP VEVKTEMKQE ENSTTRP00000006725/1-765 MDNITMQNQF YETQVIKKEN ESGYERRTLE MDQQQQAYRP -EVKTEMKQE bmy_11307T0/1-858 MDNITMQNQF YETQVIKKEN ESGYERRTLE MDQQQQAYRP VEVKTEMKQE 151 200 ENSP00000375863/1-856 APTSFLPPEA SQLKPDRQQF QSRKRPYEEN RGRGYFEHRE DRRGRSPQPP ENSBTAP00000004114/1-858 APTSFLPPEA SQHKPDRQQF QSRKRPYEEN RGRGYFEHRE DRRGRSPQPP BACU002045/1-759 APTSFLPPEA SQLKPDRQQF QSRKRPYEEN RGRGYFEHRE DRRGRSPQPP ENSTTRP00000006725/1-765 APTSFLPPEA SQLKPDRQQF QSRKRPYEEN RGRGYFEHRE DRRGRSPQPP bmy_11307T0/1-858 APTSFLPPEA SQLKPDRQQF QSRKRPYEEN RGRGYFEHRE DRRGRSPQPP 201 250 ENSP00000375863/1-856 AEEDEDDFDD TLVAIDTYNC DLHFKVARDR SSGYPLTIEG FAYLWSGARA ENSBTAP00000004114/1-858 AEEDEDDFDD TLVAIDTYNC DLHFKVARDR SSGYPLTIEG FAYLWSGARA BACU002045/1-759 AEEDEDDFDD TLVAIDTYNC DLHFKVARDR SSGYPLTIEG FAYLWSGARA ENSTTRP00000006725/1-765 AEEDEDDFDD TLVAIDTYNC DLHFKVARDR SSGYPLTIEG FAYLWSGARA bmy_11307T0/1-858 AEEDEDDFDD TLVAIDTYNC DLHFKVARDR SSGYPLTIEG FAYLWSGARA 251 300 ENSP00000375863/1-856 SYGVRRGRVC FEMKINEEIS VKHLPSTEPD PHVVRIGWSL DSCSTQLGEE ENSBTAP00000004114/1-858 SYGVRRGRVC FEMKINEEIS VKHLPSTEPD PHVVRIGWSL DSCSTQLGEE BACU002045/1-759 SYGVRRGRVC FEMKINEEIS VKHLPSTEPD PHVVRIGWSL DSCSTQLGEE ENSTTRP00000006725/1-765 SYGVRRGRVC FEMKINEEIS VKHLPSTEPD PHVVRIGWSL DSCSTQLGEE bmy_11307T0/1-858 SYGVRRGRVC FEMKINEEIS VKHLPSTEPD PHVVRIGWSL DSCSTQLGEE 301 350 ENSP00000375863/1-856 PFSYGYGGTG KKSTNSRFEN YGDKFAENDV IGCFADFECG NDVELSFTKN ENSBTAP00000004114/1-858 PFSYGYGGTG KKSTNSRFEN YGDKFAENDV IGCFADFECG NDVELSFTKN BACU002045/1-759 PFSYGYGGTG KKSTSSRFEN YGDKFAENDV IGCFADFECG NDVELSFTKN ENSTTRP00000006725/1-765 PFSYGYGGTG KKSTSSRFEN YGDKFAENDV IGCFADFECG NDVELSFTKN bmy_11307T0/1-858 PFSYGYGGTG KKSTSSRFEN YGDKFAENDV IGCFADFECG NDVELSFTKN 351 400 ENSP00000375863/1-856 GKWMGIAFRI QKEALGGQAL YPHVLVKNCA VEFNFGQRAE PYCSVLPGFT ENSBTAP00000004114/1-858 GKWMGIAFRI QKEALGGQAL YPHVLVKNCA VEFNFGQRAE PYCSVLPGFT BACU002045/1-759 GKWMGIAFRI QKEALGGQAL YPHVLVKNCA VEFNFGQRAE PYCSVLPGYT ENSTTRP00000006725/1-765 GKWMGIAFRI QKEALGGQAL YPHVLVKNCA VEFNFGQRAE PYCSVLPGFT bmy_11307T0/1-858 GKWMGIAFRI QKEALGGQAL YPHVLVKNCA VEFNFGQRAE PYCSVLPGFT 401 450 ENSP00000375863/1-856 FIQHLPLSER IRGTVGPKSK AECEILMMVG LPAAGKTTWA IKHAASNPSK ENSBTAP00000004114/1-858 FIQHLPLSER IRGTVGPKSK AECEILMMVG LPAAGKTTWA IKHAASNPSK BACU002045/1-759 FIQHLPLSER IRGTVGPKSK AECEILMMVG LPAAGKTTWA IKHAASNPSK ENSTTRP00000006725/1-765 FIQHLPLSER IRGTVGPKSK AECEILMMVG LPAAGKTTWA IKHAASNPSK bmy_11307T0/1-858 FIQHLPLSER IRGTVGPKSK AECEILMMVG LPAAGKTTWA IKHAASNPSK 451 500 ENSP00000375863/1-856 KYNILGTNAI MDKMRVMGLR RQRNYAGRWD VLIQQATQCL NRLIQIAARK ENSBTAP00000004114/1-858 KYNILGTNAI MDKMRVMGLR RQRNYAGRWD VLIQQATQCL NRLIQIAARK BACU002045/1-759 KYNILGTNAI MDKMRVMGLR RQRNYAGRWD VLIQQATQCL NRLIQIAARK ENSTTRP00000006725/1-765 KYNILGTNAI MDKMRVMGLR RQRNYAGRWD VLIQQATQCL NRLIQIAARK bmy_11307T0/1-858 KYNILGTNAI MDKMRVMGLR RQRNYAGRWD VLIQQATQCL NRLIQIAARK 501 550 ENSP00000375863/1-856 KRNYILDQTN VYGSAQRRKM RPFEGFQRKA IVICPTDEDL KDRTIKRTDE ENSBTAP00000004114/1-858 KRNYILDQTN VYGSAQRRKM RPFEGFQRKA IVICPTDEDL KDRTIKRTDE BACU002045/1-759 KRNYILDQTN VYGSAQRRKM RPFEGFQRKA IVICPTDEDL KDRTIKRTDE ENSTTRP00000006725/1-765 KRNYILDQTN VYGSAQRRKM RPFEGFQRKA IVICPTDEDL KDRTIKRTDE bmy_11307T0/1-858 KRNYILDQTN VYGSAQRRKM RPFEGFQRKA IVICPTDEDL KDRTIKRTDE 551 600 ENSP00000375863/1-856 EGKDVPDHAV LEMKANFTLP DVGDFLDEVL FIELQREEAD KLVRQYNEEG ENSBTAP00000004114/1-858 EGKDVPDHAV LEMKANFTLP DVGDFLDEVL FIELQREEAD KLVRQYNEEG BACU002045/1-759 EGKDVPDHAV LEMKANFTLP DVGDFLDEVL FIELQREEAD KLVRQYNEEG ENSTTRP00000006725/1-765 EGKDVPDHAV LEMKANFTLP DVGDFLDEVL FIELQREEAD KLVRQYNEEG bmy_11307T0/1-858 EGKDVPDHAV LEMKANFTLP DVGDFLDEVL FIELQREEAD KLVRQYNEEG 601 650 ENSP00000375863/1-856 RKAGPPPEKR FDNRGGGGFR GRGGGGGFQR YENRGPPGGN RGGFQNRGGG ENSBTAP00000004114/1-858 RRAGPPPEKR FDNRGGGGFR GRGGGGGFQR YDNRGPPGGN RGGFQNRGGG BACU002045/1-759 RKAGPPPEKR FDNRGGGGFR GRGGGGGFQR YDNRGPPGGN RGGFQNRGGG ENSTTRP00000006725/1-765 RKAGPPPEKR FDNRGGGGFR GRGGGGGFQR YDNRGPPGGN RGGFQNRGGG bmy_11307T0/1-858 RKAGPPPEKR FDNRGGGGFR GRGGGGGFQR YDNRGPPGGN RGGFQNRGGG 651 700 ENSP00000375863/1-856 SGGGGNYRGG FNRSGGGGYS QNRWGNNNRD NNNSNNRGSY NRAPQQQPPP ENSBTAP00000004114/1-858 SGGGGNYRGG FNRSGGGGYN QNRWGNNNRD NNNSNNRGSY NRAPQQQPPP BACU002045/1-759 SGGGG-YRGG FNRSGGGGYN QNRWGNNSRD NNNSNTRGSY NRAPQQQPPP ENSTTRP00000006725/1-765 SGGGS-YRGG FNRSGGGGYN QNRWGNNSRD NNNSNTRGSY NRAPQQQPPP bmy_11307T0/1-858 SGGGS-YRGG FNRSGGGGYN QNRWGNNSRD NNNSNTRGSY NRAPQQQPPP 701 750 ENSP00000375863/1-856 QQPPPPQPPP QQPPPPPSYS PARNPPGAST YNKNSNIPGS SANTSTPTVS ENSBTAP00000004114/1-858 QQPPPPQPPP QQPPPPPTYS PARNPPGASG YNKNSNIPGS SANTSTPPVS BACU002045/1-759 QQPPPPQPPP QQPPPPPSYS PARNPPGAGS YTKSSNIPGS SANTSTPPVS ENSTTRP00000006725/1-765 QQPPPPQPPP QQPPPPPSYS PARNPPGAGS YAKNSNIPGS SANTSTPTVS bmy_11307T0/1-858 QQPPPPQPPP QQPPPPPSYS PARNPPGAGS YTKNSNIPGS SANTSTPTVS 751 800 ENSP00000375863/1-856 SYSPPQPSYS Q-PPYNQGGY SQGYTAPPPP PPPPPAYNYG SYGGYNPAPY ENSBTAP00000004114/1-858 SYSPPQPSYS QPPPYNQGGY SQGYTAPPPP PPPPPAYNYG SYGGYNPAPY BACU002045/1-759 SYSPPQPSYS QPPPYNEGGY SQGYTAPPPP PPPPPAYNYG SYGGYNPAPY ENSTTRP00000006725/1-765 SYSPPQPSYS QPPPYNQGGY SQGYTAPPPP PPPPPAYNYG SYGGYNPAPY bmy_11307T0/1-858 SYSPPQPSYS QPPPYNQGGY SQGYTAPPPP PPPPPAYNYG SYGGYNPAPY 801 850 ENSP00000375863/1-856 TPPPPPTAQT YPQPSYNQYQ QYAQQWNQYY QNQGQWPPYY GNYDYGSYSG ENSBTAP00000004114/1-858 TPPPPPAAQT YPQPSYNQYQ QYAQQWNQYY QNQGQWPPYY GNYDYGSYSG BACU002045/1-759 TPPPPPTAQT YPQPSYNQYQ QYAQQWNQYY QNQGQWPPYY GNYDYGSYSG ENSTTRP00000006725/1-765 TPPPPPTAQT YPQPSYNQYQ QYAQQWNQYY QNQGQWPPYY VIYDYGSYSG bmy_11307T0/1-858 TPPPPPTAQT YPQPSYNQYQ QYAQQWNQYY QNQGQWPPYY GNYDYGSYSG 851 900 ENSP00000375863/1-856 NTQGGTSTQ ENSBTAP00000004114/1-858 NTQGGTSTQ BACU002045/1-759 NTQGGTSTQ ENSTTRP00000006725/1-765 NTQGGTSTQ bmy_11307T0/1-858 NTQGGTSTQ