KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:09 2014 Check: 00 .. Name: ENSTTRP00000008438/1-576 Len: 644 Check: 6688 Weight: 1.00 Name: ENSP00000416558/1-618 Len: 644 Check: 1836 Weight: 1.00 Name: ENSBTAP00000004115/1-619 Len: 644 Check: 6081 Weight: 1.00 Name: bmy_16114T0/1-567 Len: 644 Check: 6977 Weight: 1.00 Name: BACU012074/1-615 Len: 644 Check: 7881 Weight: 1.00 // 1 50 ENSTTRP00000008438/1-576 ---------- ---------- ---MGEKSVP SLRRR----- ---------- ENSP00000416558/1-618 MVWESQQERG GQGPRRQEGR SREGAIRMVR GSQRRKLQKF TRLCGREEGL ENSBTAP00000004115/1-619 MVWERQQSTG GRGARRDEGR SREGAVRMVR RSRSRKLQKL TGLCRREEGL bmy_16114T0/1-567 ---------- ---------- ---MGEKSVP SLRRR----- ---------- BACU012074/1-615 ---------- ---------- -------MVR RSRRRKLQKV TRLCRLEEGL 51 100 ENSTTRP00000008438/1-576 WVKRSCVSCG P-EPGGEEKK GRGNPISIQL FPPELVEHII SFLPVRDVVS ENSP00000416558/1-618 RVKRSCPSCG S-ELGVEEKR GKGNPISIQL FPPELVEHII SFLPVRDLVA ENSBTAP00000004115/1-619 RVKRSCPSCG PSEPGGEEKK GRGNPVSVQL FPPELVEHII SFLPVRDVVA bmy_16114T0/1-567 RVKRSCPSCG P-EPGGEEKK RRGKPISVQL FPPELVDHII SFLPVRDVVS BACU012074/1-615 RVKRSCPSCG P-EPGGEEKK RRGKPTSVQL FPPELVDHVI SFLPVRDVVS 101 150 ENSTTRP00000008438/1-576 LGQTCHYFHE VCDSEGVWKR ICHRLSPRLR EQGSGVQPWK RAAILNYTKS ENSP00000416558/1-618 LGQTCRYFHE VCDGEGVWRR ICRRLSPRLQ DQGSGVRPWK RAAILNYTKG ENSBTAP00000004115/1-619 LGQTCHYFHQ VCDAESVWRR ICHRLSPRLR EQGSGVRPWK RAAILNYTKG bmy_16114T0/1-567 LGQTCHYFHE VCDSEGVWRR MCHRLSPRLR KQGSGVRPWK RAAILNYTKG BACU012074/1-615 LGQTCHYLHE VCDSEGVWRR MCHRLSPRLR KQGSGVRPWK RAAILNYTKG 151 200 ENSTTRP00000008438/1-576 LYFQAF-GRR RCLSKSVAPV LAHGYRRFLP TKDHIFILDY MGTIFFLKNA ENSP00000416558/1-618 LYFQAFGGRR RCLSKSVAPL LAHGYRRFLP TKDHVFILDY VGTLFFLKNA ENSBTAP00000004115/1-619 LYFQAFGGRR RCLSKSVAPQ LAHGYRRFLP TKDHVFILDY AGTLFFLKNA bmy_16114T0/1-567 LYFQAFGGRR RCLSKTVAPV LAHGYRRFLP TKDHIFILDY TGTLFFLKNA BACU012074/1-615 LYFQAFGGRR RCLSKTVAPV LAHGYRRFLP TKDHIFILDY TGTLFFLKNA 201 250 ENSTTRP00000008438/1-576 LVSSTLGQ-- -KRACCYVVL CHGAKD---- ---------- ---------F ENSP00000416558/1-618 LV-STLGQMQ WKRACRYVVL CRGAKD---- ---------- ---------F ENSBTAP00000004115/1-619 LVSSTLGQIQ WKRACRYIVL CRGAKD---- ---------- ---------F bmy_16114T0/1-567 LVSSTLGQIQ WKRACRYVVL CRGAKD---- ---------- ---------F BACU012074/1-615 LVSSTLGQMQ WKRACRYVLL CRGAKDDPAA PASSHCKAGD PRHLRLFLQF 251 300 ENSTTRP00000008438/1-576 ASDPRGDTIY RKYLYVLATR EQPGVVDTAH SQSCDCVEVY LQSSGQRVFK ENSP00000416558/1-618 ASDPRCDTVY RKYLYVLATR EPQEVVGTTS SRACDCVEVY LQSSGQRVFK ENSBTAP00000004115/1-619 ASDPRCDTVY RKYLYVLATR EQPGVVGTTS SRACDCVEVY LQSSGQRVFK bmy_16114T0/1-567 ASDPRGDTVY RKYLYVLATR EQPGVVGTTH SQSCDCVEVY LQSNGQRVFK BACU012074/1-615 ASDPRGDTVY RKYLYVLATR EQPEVVDTTH SQSCDCVEVY LQSNGQRVFK 301 350 ENSTTRP00000008438/1-576 ITFHRAMSFK QMVLVGLESQ RTLLLLTEEG KIYSLVVNEA QLDQPHSYTG ENSP00000416558/1-618 MTFHHSMTFK QIVLVGQETQ RALLLLTEEG KIYSLVVNET QLDQPRSYTV ENSBTAP00000004115/1-619 MTFHHSMSFK QIVLVGQETQ RALLLLTEEG KIYSLVVNET QLDQPRSYTV bmy_16114T0/1-567 MTFHHSMSFK QIVL------ --------EG KIYSLVVNET QLDQPRSYTV BACU012074/1-615 MTFHHSMSFK QIVLVGQETQ RALLLLTEEG KIYSLVVNET QLDQPRSYTV 351 400 ENSTTRP00000008438/1-576 QLTLRKVSHD LPHLCVACMA SNQGSTLYIT DQGRVYFEVH TPGVYRDLFG ENSP00000416558/1-618 QLALRKVSHY LPHLRVACMT SNQSSTLYVT DQGGVYFEVH TPGVYRDLFG ENSBTAP00000004115/1-619 QLALRKVSRC LPHLRVACMA SNQSSTLYIT DQGGVYFEVH TPGVYRDLFG bmy_16114T0/1-567 QLALRKVSRC LPHLRVACMA SNQSSTLYIT DQGGVYFEVH TPGVYRDLFG BACU012074/1-615 QLALRKVSRC LPHLRVACMA SNQSSTLYIT DQGGVYFEVH TPGVYRDLFG 401 450 ENSTTRP00000008438/1-576 TLEAFDPTYQ QMPLPVSLPA KVLFCALGYN HLGLVDEFGR IFMQGSNRYG ENSP00000416558/1-618 TLQAFDPLDQ QMPLALSLPA KILFCALGYN HLGLVDEFGR IFMQGNNRYG ENSBTAP00000004115/1-619 TLQAFDPLDQ QMPLALSLPA KILFCALGYN HLGLVDEFGR IFMQGNNRYG bmy_16114T0/1-567 TLQAFDPTDQ QMPLALSLPA KVLFCALGYN HLGLVDEFGR IFMQGNNRYG BACU012074/1-615 TLQAFDPTDQ QMPLALSLPA KVLFCALGYN HLGLVDEFGR IFMQGNNRYG 451 500 ENSTTRP00000008438/1-576 QLGTGDKMDR GEPTQVRYLQ RPVALWCGLN HSLVLSQRSD FSKELLGCGC ENSP00000416558/1-618 QLGTGDKMDR GEPTQVCYLQ RPITLWCGLN HSLVLSQSSE FSKELLGCGC ENSBTAP00000004115/1-619 QLGTGDKMDR GEPTQVHYLQ RPIALWCGLN HSLVLSQGSD FSKELLGCGC bmy_16114T0/1-567 QLGTGDKMDR GEPTQVHYLQ RPVALWCGLN HSLVLSQGAD FSKELLGCGC BACU012074/1-615 QLGTGDKMDR GEPTQVHYPQ RPVALWCGLN HSLVLSQGSD FSKELLGCGC 501 550 ENSTTRP00000008438/1-576 GARGR-PGWP RGSASFVKLH IKVPLYASSL CPTRECLYVL SGHDIEHHPA ENSP00000416558/1-618 GAGGRLPGWP KGSASFVKLQ VKVPLCACAL CATRECLYIL SSHDIEQHAP ENSBTAP00000004115/1-619 GAGGRLPGWP KGSASFVKLH IKVPLCACSL CSTRECLYML SSHDIEHHPA bmy_16114T0/1-567 GAGGRLPGWP KGSASFVKLH IKVPLCACSL CSTRECLYVL SSHDIEHHPA BACU012074/1-615 GAGGRLPGWP KGSASFVKLH IKVPLCACSL CSTRECLYVL SSHDIEHHPA 551 600 ENSTTRP00000008438/1-576 YRDLPASRVA GTPKPSLGAE AAQDPEGVAV QACEPYLGQI HSCPTLQECM ENSP00000416558/1-618 YRHLPASRVV GTPEPSLGAR APQDPGG-MA QACEEYLSQI HSCQTLQDRT ENSBTAP00000004115/1-619 YRDLPASKAV GTPEPSLGAG APQDPGG-VA WACEEYLSQI HNCPTLQDRM bmy_16114T0/1-567 YRDLPASRVA GTPEPSLGAG AAQDPGGAAA RACEQYLSQI HSCPTLQDRM BACU012074/1-615 YRDLPASRVA GTPEPSLGAG AAQDPGGVVA RACEQYLSQI HSCPTLQDRM 601 650 ENSTTRP00000008438/1-576 ETTKVIVGWM PLMATQEDFF WETLDMLQRA -FGGVGQGPP TPDS ENSP00000416558/1-618 EKMKEIVGWM PLMAAQKDFF WEALDMLQRA EGGGGGVGPP APET ENSBTAP00000004115/1-619 EKMKEIVGWM PLMAAQKDFF WEALDMLQRA -AGGAGQGPP PPES bmy_16114T0/1-567 EKMKEIVGWM PLMAAQKDFF WEALDMLQRA -AGGVGQGPP TPDS BACU012074/1-615 EKMKEVVGWM PLMAAQKDFF WEALDMLQRA -AGGVGQGPP TPDS