KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:23:10 2014 Check: 00 .. Name: ENSP00000299106/1-310 Len: 333 Check: 7157 Weight: 1.00 Name: ENSBTAP00000004124/1-302 Len: 333 Check: 6149 Weight: 1.00 Name: bmy_12580T0/1-310 Len: 333 Check: 880 Weight: 1.00 Name: ENSTTRP00000002203/1-332 Len: 333 Check: 8710 Weight: 1.00 // 1 50 ENSP00000299106/1-310 MALRRP---- ---------- --------PR LRL-CARLPD FFLLLLFRGC ENSBTAP00000004124/1-302 MALRRR---- ---------- --------PS LVL------- --LLLLVRGC bmy_12580T0/1-310 MALRRR---- ---------- --------PA LAL-LLLLRD LLSVLSLAGC ENSTTRP00000002203/1-332 MATARRVVAM VTGARRAAGR APAGSALGPS AALDMALRRA RALVLLLRGC 51 100 ENSP00000299106/1-310 LIGAVNLKSS NRTPVVQEFE SVELSCIITD SQTSDPRIEW KKIQDEQTTY ENSBTAP00000004124/1-302 LIGAVNLKSS NRTPVVQEFE SVELSCIITD SQTNDPRIEW KKIQDEQTTY bmy_12580T0/1-310 LIGAVNLKSS NRNPVVQEYE SVELSCIITD SQTNDPRIEW KKIQDEQTTY ENSTTRP00000002203/1-332 LIGAVNLKSS NRNPVVQEFE SVELSCIITD SQTNDPRIEW KKIQDEQTTY 101 150 ENSP00000299106/1-310 VFFDNKIQGD LAGRAEILGK TSLKIWNVTR RDSALYRCEV VARNDRKEID ENSBTAP00000004124/1-302 VFFDNKIQGD LTDRAELLGK TSLKIWNVTR KDSALYRCEV VARNDRKEID bmy_12580T0/1-310 VFFDNKIQGD LAGRAELLGK TSLKIWNVTR TDSALYRCEV VARHDRKEID ENSTTRP00000002203/1-332 VFFDNKIQGD LAGRAELLGK TSLKIWNVTR TDSALYRCEV VARHDRKEID 151 200 ENSP00000299106/1-310 EIVIELTVQV KPVTPVCRVP KAVPVGKMAT LHCQESEGHP RPHYSWYRND ENSBTAP00000004124/1-302 EIVIELTVQV KPVAPVCRVP RAVPVGKAAT LSCQEGEGFP RPHYSWYRND bmy_12580T0/1-310 EIVIELTVQV KPVPPVCGVP RAVPVGKAAT LTCQEGEGYP RPYYSWYRND ENSTTRP00000002203/1-332 EIVIELTVQV KPVPPVCRVP RAVPVGKAAT LTCQEGEGYP RPHYSWYRND 201 250 ENSP00000299106/1-310 VPLPTDSRAN PRFRNSSFHL NSETGTLVFT AVHKDDSGQY YCIASNDAGS ENSBTAP00000004124/1-302 VPLPTDSRAN PRFRNSSFVL NPETGTLVFS AVHKEDSGQY YCIASNDAGS bmy_12580T0/1-310 VPMPTDSRAN PRFRNSSFLF NPDTGTLVFS AVHREDSGQY YCIASNEAGS ENSTTRP00000002203/1-332 VPLPTDSRAN PRFRNSSF-L HPDTGTLVFS AIHKEDSGQY YCIASNDAGS 251 300 ENSP00000299106/1-310 ARCEEQEMEV YDLNIGGIIG GVLVVLAVLA LITLGICCAY RRGYFINNKQ ENSBTAP00000004124/1-302 ARCEEQDMEV YDLNIGGIIG GVLVVLTVLA LITGGICCAY RRGYFISHDR bmy_12580T0/1-310 ARCQEQDMEV YDLNIGGIIG GVLVVLTVLA LITVGICCAY RRGYFMNNKQ ENSTTRP00000002203/1-332 ARCEEQDMEV YDLNIGGIIG GVLVVLTVLA LITVGICCAY RRGYFINNKQ 301 350 ENSP00000299106/1-310 DGESYKNPGK PDGVNYIRTD EEGDFRHKSS FVI ENSBTAP00000004124/1-302 SGESYKNPGK PDGVNYIRTD EEGDFRHKSS FVI bmy_12580T0/1-310 NGESYKNPGK PDGVNYIRTD EEGDFRHKSS FMI ENSTTRP00000002203/1-332 NGESYKNPGK PDGVNYIRTD DEGDFRHKSS FVI