KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:23:12 2014 Check: 00 .. Name: ENSBTAP00000004135/1-414 Len: 414 Check: 5364 Weight: 1.00 Name: ENSP00000365858/1-413 Len: 414 Check: 2904 Weight: 1.00 Name: bmy_16630T0/1-413 Len: 414 Check: 3656 Weight: 1.00 Name: ENSTTRP00000004388/1-383 Len: 414 Check: 1550 Weight: 1.00 // 1 50 ENSBTAP00000004135/1-414 MEFPGLGALG TSEPLPQFMD PALVSSPPES GVFFPPGSEG LDTAASSTAA ENSP00000365858/1-413 MEFPGLGSLG TSEPLPQFVD PALVSSTPES GVFFPSGPEG LDAAASSTAP bmy_16630T0/1-413 MEFPGLGALG TSEPLSQFLD PALVSSPPES GVFFPSGPEG LDTAASSTAP ENSTTRP00000004388/1-383 ---------- ---------- ---------S GVFFPSGPEG LDTAASSTTP 51 100 ENSBTAP00000004135/1-414 STATAAAAAL AYYRDAEAYR HSPVFQVYPL INCMEGIPGG SPYASWAYGK ENSP00000365858/1-413 STATAAAAAL AYYRDAEAYR HSPVFQVYPL LNCMEGIPGG SPYAGWAYGK bmy_16630T0/1-413 STATAAAAAL AYYRDAEAYR HSPVFQVYPL LNCMEGIPGN SPYAGWAYGK ENSTTRP00000004388/1-383 STATAAAAAL AYYRDAEAYR HSPVFQVYPL LNCMEGIPGS SPYAGWAYGK 101 150 ENSBTAP00000004135/1-414 TGLYPASTVC PTREDSSPQA SEDLDGKGGS SFLETLKTER MSPDLLTLGT ENSP00000365858/1-413 TGLYPASTVC PTREDSPPQA VEDLDGKGST SFLETLKTER LSPDLLTLGP bmy_16630T0/1-413 TGLYPASTAC PTREDSPPQA PEDLDGKGSG SFLETLKTER LSPDLLTLGP ENSTTRP00000004388/1-383 TGLYPASTAC PTREDSPPQA PEDLDGKGGG SFLETLKTER LSPDLLTLGP 151 200 ENSBTAP00000004135/1-414 APPSSIPVPS SAYGGPDFSS TYFSPTGSPL NPAPYSSPKL RGTLPLTPCA ENSP00000365858/1-413 ALPSSLPVPN SAYGGPDFSS TFFSPTGSPL NSAAYSSPKL RGTLPLPPC- bmy_16630T0/1-413 ALPSSIPVPS SAYGGPDFSS TFFSPTGSPL NPAAYSSPKL RGTLPLTPC- ENSTTRP00000004388/1-383 ALPSSIPVPS SAYGGPDFSS TFFSPTGSPL NPAAYSSPKL RGTLPLTPC- 201 250 ENSBTAP00000004135/1-414 EARECVNCGA TATPLWRRDR TGHYLCNACG LYHKMNGQNR PLIRPKKRLI ENSP00000365858/1-413 EARECVNCGA TATPLWRRDR TGHYLCNACG LYHKMNGQNR PLIRPKKRLI bmy_16630T0/1-413 EARECVNCGA TATPLWRRDR TGHYLCNACG LYHKMNGQNR PLIRPKKRLI ENSTTRP00000004388/1-383 EARECVNCGA TATPLWRRDR TGHYLCNACG LYHKMNGQNR PLIRPKKRLI 251 300 ENSBTAP00000004135/1-414 VSKRAGTQCT NCQTTTTTLW RRNASGDPVC NACGLYYKLH QVNRPLTMRK ENSP00000365858/1-413 VSKRAGTQCT NCQTTTTTLW RRNASGDPVC NACGLYYKLH QVNRPLTMRK bmy_16630T0/1-413 VSKRAGTQCT NCQTTTTTLW RRNASGDPVC NACGLYYKLH QVNRPLTMRK ENSTTRP00000004388/1-383 VSKRAGTQCT NCQTTTTTLW RRNASGDPVC NACGLYYKLH QVNRPLTMRK 301 350 ENSBTAP00000004135/1-414 DGIQTRNRKA SGKGKKKRGS SLGATGAAEG PSGGFMVVAG GSSSGNCGEV ENSP00000365858/1-413 DGIQTRNRKA SGKGKKKRGS SLGGTGAAEG PAGGFMVVAG GSGSGNCGEV bmy_16630T0/1-413 DGIQTRNRKA SGKGKKKRGS SLGGTGAAEG PAGSFMVVAG GSSSGNCGEV ENSTTRP00000004388/1-383 DGIQTRNRKA SGKGKKKRGS SLGGTGAAEG PAGSFMVVAG GSSSGNCGEV 351 400 ENSBTAP00000004135/1-414 TSGLTLGPPG TAHVYQGLGP VVLSGPVSHI MPFPGPLLGS PTGSFPTGPV ENSP00000365858/1-413 ASGLTLGPPG TAHLYQGLGP VVLSGPVSHL MPFPGPLLGS PTGSFPTGPM bmy_16630T0/1-413 ASGLTLGPPG TAHLYQGLGP VVLSGPVSHL MPFPGPLLGS PTGSFPTGPM ENSTTRP00000004388/1-383 ASGLTLGPPG TAHLYQGLGP VVLSGPVSHL MPFPGPLLGS PTGSFPTGPM 401 450 ENSBTAP00000004135/1-414 PPTTTTTVVA PLSS ENSP00000365858/1-413 PPTTSTTVVA PLSS bmy_16630T0/1-413 PPTTTTTVVA PLSS ENSTTRP00000004388/1-383 PPTT-TTVVA PLSS