KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:14 2014 Check: 00 .. Name: ENSTTRP00000015455/1-616 Len: 683 Check: 1180 Weight: 1.00 Name: ENSP00000406157/1-619 Len: 683 Check: 387 Weight: 1.00 Name: ENSBTAP00000004152/1-568 Len: 683 Check: 5946 Weight: 1.00 Name: bmy_15142T0/1-633 Len: 683 Check: 8487 Weight: 1.00 Name: BACU007900/1-350 Len: 683 Check: 9638 Weight: 1.00 // 1 50 ENSTTRP00000015455/1-616 -TWKKQGKXX XXXNSTNVVY QAHHVSRNKR GQVVGTRGGF RGCTVWLTGL ENSP00000406157/1-619 MSGIKKQKTE NQQKSTNVVY QAHHVSRNKR GQVVGTRGGF RGCTVWLTGL ENSBTAP00000004152/1-568 ---------- ---------- ---------- ---------- -------TGL bmy_15142T0/1-633 ---------E TQQKSTNVVY QAHHVSRNKR GQVVGTRGGF RGCTVWLTGL BACU007900/1-350 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015455/1-616 SGAGKTTISF ALEENLVSHA IPCYSLDGDN VRHGLNKNLG FSPWDREENI ENSP00000406157/1-619 SGAGKTTISF ALEEYLVSHA IPCYSLDGDN VRHGLNRNLG FSPGDREENI ENSBTAP00000004152/1-568 SGAGKTTISF ALEEYLVSHA IPCYSLDGDN IRQGLNKNLG FSTWDREENI bmy_15142T0/1-633 SGAGKTTISF ALEENLVSHA IPCYSLDGDN VRHGLNKNLG FSPWDREENI BACU007900/1-350 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015455/1-616 RRIAEVARLF ADAGLVCITS FISPFAKDRE NARKIHESAG LPFFEIFVDA ENSP00000406157/1-619 RRIAEVAKLF ADAGLVCITS FISPFAKDRE NARKIHESAG LPFFEIFVDA ENSBTAP00000004152/1-568 RRIAEVAKLF ADAGLVCITS FISPFAKDRE NARKIHESSG LPFFEIFVDA bmy_15142T0/1-633 RRIAEVARLF ADAGLVCITS FISPFAK--- ---------- -----IFVDA BACU007900/1-350 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015455/1-616 PLNICESRDV KGLYKRARAG EIKGFTGIDS DYEKPETPEL VLKTNLSSVS ENSP00000406157/1-619 PLNICESRDV KGLYKRARAG EIKGFTGIDS DYEKPETPER VLKTNLSTVS ENSBTAP00000004152/1-568 PLNICERRDV KGLYKRARAG EIKGFTGIDS DYEKPESPEL VLKTNLSSVS bmy_15142T0/1-633 PLNICESRDV KGLYKRARAG EIKGFTGIDS DYEKPETPEL VLKTNLSSVS BACU007900/1-350 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000015455/1-616 DCVQQVVELL QEQNIVPHTI IKGIHELFVP ENKLDQVRAE AEVLPSLSIT ENSP00000406157/1-619 DCVHQVVELL QEQNIVPYTI IKDIHELFVP ENKLDHVRAE AETLPSLSIT ENSBTAP00000004152/1-568 DCMQQVVELL QEQNIVPHTV IKGIHELFVP ENKLDQVRAE AEALPSLSIT bmy_15142T0/1-633 DCVQQVVELL QEQNIVPHTI IKGIHELFVP ENKLDQVRAE AEVLPSLSIT BACU007900/1-350 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000015455/1-616 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDGVINMS ENSP00000406157/1-619 KLDLQWVQVL SEGWATPLKG FMREKEYLQV MHFDTLLDGM ALPDGVINMS ENSBTAP00000004152/1-568 KLDLQWVQVL SEGWATPLKG FMREKEYLQV VHFGTLID-- ---DGVINMS bmy_15142T0/1-633 KLDLQWVQVL SEGWATPLKG FMREKEYLQV IHFGTLLD-- ---DGVINMS BACU007900/1-350 ---------- ---------- ---------- ---MALST-- ---DGVINMS 301 350 ENSTTRP00000015455/1-616 IPVVLPVSAD DKTRLQGCSE FVLTHGGRKV AILRDPEFYE HRKEERCSHV ENSP00000406157/1-619 IPIVLPVSAE DKTRLEGCSK FVLAHGGRRV AILRDAEFYE HRKEERCSRV ENSBTAP00000004152/1-568 IPIVLPISAD DKTRLEGCSK FVLTHGGRRV AILEDPEFYE HRKEERCSHV bmy_15142T0/1-633 IPVVLPVSAD DKTRLEGCSE FVLTHGGRKV AILQDPEFYE HRKEERCSHV BACU007900/1-350 IPVVLPVSAD DKTRLEGCSE FVLTHGGRKV AILRDPEFYE HRKEERCSHV 351 400 ENSTTRP00000015455/1-616 WGTTCAKHPY IK-------- ---------- MVMESGDWLV GGDLQVLERI ENSP00000406157/1-619 WGTTCTKHPH IK-------- ---------- MVMESGDWLV GGDLQVLEKI ENSBTAP00000004152/1-568 WGTTCAKHPY IK-------- ---------- MVMESGDWLV GGDLQVLERI bmy_15142T0/1-633 WGTTCAKHPY IK-------- ---------- MVMESGDWLV GGDLQVLERI BACU007900/1-350 WGTTCAKHPY IKTLVSTILF SMKLTTLDTH MVMESGDWLV GGDLQVLERI 401 450 ENSTTRP00000015455/1-616 RWNDGLDQYR LTPLELKQKC KQMNADAVFA FQLRNPVHNG HALLMQDTRR ENSP00000406157/1-619 RWNDGLDQYR LTPLELKQKC KEMNADAVFA FQLRNPVHNG HALLMQDTRR ENSBTAP00000004152/1-568 QWNDGLDQYR LTPLELKQKC KEMDADAVFA FQLRNPVHNG HALLMQDTRR bmy_15142T0/1-633 RWNDGLDQYR LTPLELKQKC KEMNADAVFA FQLRNPVHNG HALLMQDTRR BACU007900/1-350 RWNDGLDQYR LTPLELKQKC KEMNADAVFA FQLRNPVHNG HALLMQDTRR 451 500 ENSTTRP00000015455/1-616 RLLERGYKHP VLLLHPLGGW TKDDDVPLDW RMKQHTAVLE EEVLDPKSTI ENSP00000406157/1-619 RLLERGYKHP VLLLHPLGGW TKDDDVPLDW RMKQHAAVLE EGVLDPKSTI ENSBTAP00000004152/1-568 RLLERGYKHP VLLLHPLGGW TKDDDVPLDW RMKQHAAVLE EEVLDPKSTI bmy_15142T0/1-633 RLLERGYQHP VLLLHPLGGW TKDDDVPLDW RMKQHAAVLE EEVLDPRSTV BACU007900/1-350 RLLERGYQHP VLLLHPLGGW TKDDDVPLDW RMKQHAAVLE EEVLDPRSTV 501 550 ENSTTRP00000015455/1-616 VAIFPSPMLY AGPTE----- ---------- ---------- ---------- ENSP00000406157/1-619 VAIFPSPMLY AGPTE----- ---------- ---------- ---------- ENSBTAP00000004152/1-568 VAIFPSPMLY AGPTE----- ---------- ---------- ---------- bmy_15142T0/1-633 VAIFPSPMLY AGPTEVRSSP GWARDSGVQH LILLRRAISV KMLETPNQTC BACU007900/1-350 VAIFPSPMLY AGPTE----- ---------- ---------- ---------- 551 600 ENSTTRP00000015455/1-616 ---------- VQWHC-SRMV AGANFYIVGR DPAGMPHPET KKNLYEPTHG ENSP00000406157/1-619 ---------- VQWHCRSRMI AGANFYIVGR DPAGMPHPET KKDLYEPTHG ENSBTAP00000004152/1-568 ---------- VQWHCRARMV AGANFYIVGR DPAGMPHPET KRDLYEPTHG bmy_15142T0/1-633 HTLPLRLWKL VQWHCRSRMV AGANFYIVGR DPAGMPHPET KKDLYEPTHG BACU007900/1-350 ---------- VQWHCRSRMV AGANFYIVGR DPVGMPHPET KKDLYEPTHG 601 650 ENSTTRP00000015455/1-616 DKVLNHGTGP PS-EIIPMR- KAYNKAKKAM DFYDPARHNE FDFISGTRMR ENSP00000406157/1-619 GKVLSMAPGL TSVEIIPFRV AAYNKAKKAM DFYDPARHNE FDFISGTRMR ENSBTAP00000004152/1-568 GKVLTMAPGL TSVEIIPFRV AAYNKAKKAM DFYDPERHDE FDFISGTRMR bmy_15142T0/1-633 AKVLTMAPGL TSVEIIPFRV AAYNKAKKAM DFYDPARHNE FDFISGTRMR BACU007900/1-350 AKVLTMAPGL TSVEIIPFRV AAYNKAKKAM DFYDPARHNE FDFISGTRMR 651 700 ENSTTRP00000015455/1-616 KLAREGENPP DGFMAPKAWK VLTDYYRSLE KNN ENSP00000406157/1-619 KLAREGENPP DGFMAPKAWK VLTDYYRSLE KN- ENSBTAP00000004152/1-568 KLAREGENPP DGFMAPKAWK VLTDYYASLE KNN bmy_15142T0/1-633 KLAREGENPP DGFMAPKAWK VLTDYYRSLE KNN BACU007900/1-350 KLAREGENPP DGFMAPKAWK VLTDYYRSLE KNN