KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:16 2014 Check: 00 .. Name: ENSP00000423630/1-491 Len: 491 Check: 1179 Weight: 1.00 Name: ENSTTRP00000003880/1-479 Len: 491 Check: 1127 Weight: 1.00 Name: ENSBTAP00000004177/1-449 Len: 491 Check: 9253 Weight: 1.00 Name: bmy_17338T0/1-444 Len: 491 Check: 307 Weight: 1.00 Name: BACU012877/1-405 Len: 491 Check: 3598 Weight: 1.00 // 1 50 ENSP00000423630/1-491 MGANNGKQYG SEGKGSSSIS SDVSSSTDHT PTKAQKNVAT SEDSDLSMRT ENSTTRP00000003880/1-479 ---------- --GKGSSSIS SDVSSSTDHT PTQAQKNVAT SEDSDLSMRT ENSBTAP00000004177/1-449 ---------- ---------- ---------- ---------- --DSDLSMRT bmy_17338T0/1-444 ---------- ---------- ---------- ---------- -------MRT BACU012877/1-405 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000423630/1-491 LSTPSPALIC PPNLPGFQNG RGSSTSSSSI TGETVAMVHS PPPTRLTHPL ENSTTRP00000003880/1-479 LSTPSPALIC PPNLPGFQNG RGSSTSSSSV TGETVAMVHS PPPTRLTHPL ENSBTAP00000004177/1-449 LSTPSPALIC PPNLPGFQNG RGSSTSSSSI TGETVAMVHS PPPTRLTHPL bmy_17338T0/1-444 LSTPSPALIC PPNLPGFQNG RGSSTSSSSI TGETVAMVHS PPPTRLTHPL BACU012877/1-405 ---------- ---------- ---------- ------MVHS PPPTRLTHPL 101 150 ENSP00000423630/1-491 IRLASRPQKE QASIDRLPDH SMVQIFSFLP TNQLCRCARV CRRWYNLAWD ENSTTRP00000003880/1-479 IRLASRPPKE QASIERLPDH AMVQIFSFLP TNQLCRCARV CRRWYNLAWD ENSBTAP00000004177/1-449 IRLASRPQKE QASIERLPDH AMVQVFSFLP TNQLCRCARV CRRWYNLAWD bmy_17338T0/1-444 IRLASRPQKE QASIERLPDH AMVQIFSFLP TNQLCRCARV CRRWYNLAWD BACU012877/1-405 IRLASRPQKE QASIERLPDH AMVQIFSFLP TNQLCRCARV CRRWYNLAWD 151 200 ENSP00000423630/1-491 PRLWRTIRLT GETINVDRAL KVLTRRLCQD TPNVCLMLET VTVSGCRRLT ENSTTRP00000003880/1-479 PRLWRTIRLT GETVNVDRAL KVLTRRLCQD TPNVCLMLET VSVSGCRRLT ENSBTAP00000004177/1-449 PRLWRTIRLT GETINVDRAL KVLTRRLCQD TPNVCLMLET VSVSGCRRLT bmy_17338T0/1-444 PRLWRTIRLT GETINVDRAL KVLTRRLCQD TPNVCLMLET VSVSGCRRLT BACU012877/1-405 PRLWRTIRLT GETINVDRAL KVLTRRLCQD TPNVCLMLET VSVSGCRRLT 201 250 ENSP00000423630/1-491 DRGLYTIAQC CPELRRLEVS GCYNISNEAV FDVVSLCPNL EHLDVSGCSK ENSTTRP00000003880/1-479 DRGLYTIAQR CPELRRLEVS GCYNISNEAV FDVVSLCPNL EHLDVSECSK ENSBTAP00000004177/1-449 DRGLYTIAQC CPELRRLEVS GCYNISNEAV FDVVSLCPNL EHLDVSGCSK bmy_17338T0/1-444 DRGLYTIAQC CPELRRLEVS GCYNISNEAV FDVVSLCPNL EHLDVSGCSK BACU012877/1-405 DRGLYTIAQC CPELRRLEVS GCYNISNEAV FDVVSLCPNL EHLDVSGCSK 251 300 ENSP00000423630/1-491 VTCISLTREA SIKLSPLHGK QISIRYLDMT DCFVLEDEGL HTIAAHCTQL ENSTTRP00000003880/1-479 VTCISLTREA SIKLSPLHGK QISIRYLDMT DCFVLEDEGL HTIAAHCTQL ENSBTAP00000004177/1-449 VTCISLTREA SIKLSPLHGK QISIRYLDMT DCFVLEDEGL HTIAAHCTQL bmy_17338T0/1-444 VTCISLTREA SIKLSPLHGK QISIRYLDMT DCFVLEDEGL HTIAAHCTQL BACU012877/1-405 VTCISLTREA SIKLSPLHGK QISIRYLDMT DCFVLEDEGL HTIAAHCTQL 301 350 ENSP00000423630/1-491 THLYLRRCVR LTDEGLRYLV IYCASIKELS VSDCRFVSDF GLREIAKLES ENSTTRP00000003880/1-479 THLYLRRCVR LTDEGLRYLM IYCASIKELS VSDCRFVSDF GLREIAKLES ENSBTAP00000004177/1-449 THLYLRRCVR LTDEGLRYLM IYCTSIKELS VSDCRFVSDF GLREIAKLES bmy_17338T0/1-444 THLYLRRCVR LTDEGLRYLM IYCASIKELS VSDCRFVSDF GLREIAKLES BACU012877/1-405 THLYLRRCVR LTDEGLRYLM IYCSSIKELS VSDCRFVSDF GLREIAKLES 351 400 ENSP00000423630/1-491 RLRYLSIAHC GRVTDVGIRY VAKYCSKLRY LNARGCEGIT DHGVEYLAKN ENSTTRP00000003880/1-479 RLRYLSIAHC GRVTDVGIRY VAKYCGKLRY LNARGCEGIT DHGVEYLAKN ENSBTAP00000004177/1-449 RLRYLSIAHC GRVTDVGIRY VAKYCGKLRY LNARGCEGIT DHGLEYLAKN bmy_17338T0/1-444 RLRYLSIAHC GRVTDVGIRY VAKYCGKLRY VNARGCEGIT DHGVEYLAKN BACU012877/1-405 RLRYLSIAHC GRVTDVGIRY VAKYCGKLRY LNARGCEGIT DHGVEYLAKN 401 450 ENSP00000423630/1-491 CTKLKSLDIG KCPLVSDTGL ECLALNCFNL KRLSLKSCES ITGQGLQIVA ENSTTRP00000003880/1-479 CAKLKSLDIG KCPLVSDTGL ECLALNCFNL KRLSLKSCES ITGQGLQIVA ENSBTAP00000004177/1-449 CAKLKSLDIG KCPLVSDTGL ECLALNCFNL KRLSLKSCES ITGQGLQIVA bmy_17338T0/1-444 CAKLKSLDIG KCPLVSDTGL ECLALNCFNL KRLSLKSCES ITGQGLQIVA BACU012877/1-405 CAKLKSLDIG KCPLVSDTGL ECLALNCFNL KRLSLKSCES ITGQGLQIVA 451 500 ENSP00000423630/1-491 ANCFDLQTLN VQDCEVSVEA LRFVKRHCKR CVIEHTNPAF F ENSTTRP00000003880/1-479 ANCFDLQMLN VQDCEVSVEA LRFVKRHCKR CVIEHTNPAF F ENSBTAP00000004177/1-449 ANCFDLQMLN VQDCEVSVEA LRFVKRHCKR CVIEHTNPAF F bmy_17338T0/1-444 ANCFDLQMLN VQDCEVSVEA LRFVKRHCKR CVIEHTNPAF F BACU012877/1-405 ANCFDLQMLN VQDCEVSVEA LRFVKRHCKR CVIEHTNPAF F