KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:17 2014 Check: 00 .. Name: ENSP00000175506/1-561 Len: 561 Check: 9206 Weight: 1.00 Name: ENSTTRP00000003281/1-561 Len: 561 Check: 4082 Weight: 1.00 Name: ENSBTAP00000004181/1-561 Len: 561 Check: 7474 Weight: 1.00 Name: bmy_22377T0/1-561 Len: 561 Check: 7632 Weight: 1.00 Name: BACU000422/1-541 Len: 561 Check: 8342 Weight: 1.00 // 1 50 ENSP00000175506/1-561 MCGIWALFGS DDCLSVQCLS AMKIAHRGPD AFRFENVNGY TNCCFGFHRL ENSTTRP00000003281/1-561 MCGIWALFGS DDCLSVQCLS AMKIAHRGPD AFRFENVNGY TNCCFGFHRL ENSBTAP00000004181/1-561 MCGIWALFGS DDCLSVQCLS AMKIAHRGPD AFRFENVNGY TNCCFGFHRL bmy_22377T0/1-561 MCGIWALFGS DDCLSVQCLS AMKIAHRGPD AFRFENVNGY TNCCFGFHRL BACU000422/1-541 MCGIWALFGS DDCLSVQCLS AMKIAHRGPD AFRFENVNGY TNCCFGFHRL 51 100 ENSP00000175506/1-561 AVVDPLFGMQ PIRVKKYPYL WLCYNGEIYN HKKMQQHFEF EYQTKVDGEI ENSTTRP00000003281/1-561 AVVDQLFGMQ PIRVKKYPYL WLCYNGEIYN HKKLQHHFEF EYQTKVDGEI ENSBTAP00000004181/1-561 AVVDQLFGMQ PIRVKKYPYL WLCYNGEIYN HKKLQHHFEF EYQTKVDGEI bmy_22377T0/1-561 AVVDQLFGMQ PIRVKKYPYL WLCYNGEIYN HKKLQHHFEF EXQTKVDGEI BACU000422/1-541 AVVDQLFGMQ PIRVKKYPYL WLCYNGEIYN HKKLQHHFEF EYQTKVDGEI 101 150 ENSP00000175506/1-561 ILHLYDKGGI EQTICMLDGV FAFVLLDTAN KKVFLGRDTY GVRPLFKAMT ENSTTRP00000003281/1-561 ILHLYDKGGI EQTVCMLDGV FAFILLDTAN KKVFLGRDTY GVRPLFKAVT ENSBTAP00000004181/1-561 ILHLYDKGGI EQTVCMLDGV FAFILLDTAN KKVFLGRDTY GVRPLFKAMT bmy_22377T0/1-561 ILHLYDKGGI EQTVCMLDGV FAFILLDTAN KKVFLGRDTY GVRPLFKAVT BACU000422/1-541 ILHLYDKGGI EQTVCMLDGV FAFILLDTAN KKVFLGRDTY GVRPLFKAVT 151 200 ENSP00000175506/1-561 EDGFLAVCSE AKGLVTLKHS ATPFLKVEPF LPGHYEVLDL KPNGKVASVE ENSTTRP00000003281/1-561 EDGFLAVCSE AKGLINLKHS MTPFLKVEPF LPGHYEVLDL KPNGKVASVE ENSBTAP00000004181/1-561 EDGFLAVCSE AKGLVNLKHS MTPFLKVEPF LPGHYEVLDL KPNGKVASVE bmy_22377T0/1-561 EDGFLAVCSE AKGLINLKHS MTPFLKVEPF LPGHYEVLDL KPNGKVASVE BACU000422/1-541 EDGFLAVCSE AKG------- ---------- ---HYEVLDL KPNGKVASVE 201 250 ENSP00000175506/1-561 MVKYHHCRDV PLHALYDNVE KLFPGFEIET VKNNLRILFN NAVKKRLMTD ENSTTRP00000003281/1-561 MVKYHNCRDE PLHALYDSVE KLFPGFEIET VKNNLRILFD NAIKKRLMTD ENSBTAP00000004181/1-561 MVKHHHCRDE PLHALYDGVE KLFPGFEIET VKSNLRILFD NAVKKRLMTD bmy_22377T0/1-561 MVKYHHCRDE PLHALYDSVE KLFPGFEIET VKNNLRILFD NAIKKRLMTD BACU000422/1-541 MVKYHHCRDE PLHALYDSVE KLFPGFEIET VKNNLRILFD NAIKKRLMTD 251 300 ENSP00000175506/1-561 RRIGCLLSGG LDSSLVAATL LKQLKEAQVQ YPLQTFAIGM EDSPDLLAAR ENSTTRP00000003281/1-561 RRIGCLLSGG LDSSLVAAIL LKQLKEAKVQ YPLQTFAIGM EDSPDLLAAR ENSBTAP00000004181/1-561 RRIGCLLSGG LDSSLVAATL LKQLKEAQVQ YPLQTFAIGM EDSPDLLAAR bmy_22377T0/1-561 RRIGCLLSGG LDSSLVAAIL LKQLKEAQVQ YPLQTFAIGM EDSPDLLAAR BACU000422/1-541 RRIGCLLSGG LDSSLVAAIL LKQLKEAQVQ YPLQTFAIGM EDSPDLLAAR 301 350 ENSP00000175506/1-561 KVADHIGSEH YEVLFNSEEG IQALDEVIFS LETYDITTVR ASVGMYLISK ENSTTRP00000003281/1-561 KVANHIGSEH HEVLFNSEEG IQVLDEVIFS LETYDITTVR ASVGMYLISK ENSBTAP00000004181/1-561 KVANHIGSEH HEVLFNSEEG IQVLDEVIFS LETYDITTVR ASVGMYLISK bmy_22377T0/1-561 KVANHIGSEH HEVLFNSEEG IQVLDEVIFS LETYDITTVR ASVGMYLISK BACU000422/1-541 KVANHIGSEH HEVLFNSEEG IQVLDEVIFS LETYDITTVR ASVGMYLISK 351 400 ENSP00000175506/1-561 YIRKNTDSVV IFSGEGSDEL TQGYIYFHKA PSPEKAEEES ERLLRELYLF ENSTTRP00000003281/1-561 YIRKNTDSVV IFSGXXXXXX XXXXXXXXXA PSPEKAEEES ERLLKELYLF ENSBTAP00000004181/1-561 YIRKNTDSVV IFSGEGSDEL TQGYIYFHKA PSPEKAEEES ERLLRELYLF bmy_22377T0/1-561 YIRKNTDSVV IFSGEGSDEL TQGYIYFHKA PSPEKAEEES ERLLKELYLF BACU000422/1-541 YIRKNTDSVV IFSGEGSDEL TQGYIYFHKA PSPEKAEEES ERLLKELYLF 401 450 ENSP00000175506/1-561 DVLRADRTTA AHGLELRVPF LDHRFSSYYL SLPPEMRIPK NGIEKHLLRE ENSTTRP00000003281/1-561 DVLRADRTTA AHGLELRVPF LDHRFSSYYM SLPPNMKTPK NGIEKHLLRE ENSBTAP00000004181/1-561 DVLRADRTTA AHGLELRVPF LDHRFSSYYL SLPPDMRVPK NGIEKHLLRE bmy_22377T0/1-561 DVLRADRTTA AHGLELRVPF LDHRFSSYYL SLPPDMRIPK NGIEKHLLRE BACU000422/1-541 DVLRADRTTA AHGLELRVPF LDHRFSSYYL SLPPDMRIPK NGIEKHLLRE 451 500 ENSP00000175506/1-561 TFEDSNLIPK EILWRPKEAF SDGITSVKNS WFKILQEYVE HQVDDAMMAN ENSTTRP00000003281/1-561 TFEDSNLIPK EILWRPKEAF SDGITSVKNS WFRILQEYID HQVDDAVMAS ENSBTAP00000004181/1-561 TFEDSNLIPK EILWRPKEAF SDGITSVKNS WFRILQDYIE HQVDDAAMAS bmy_22377T0/1-561 TFEDSNLIPK EILWRPKEAF SDGITSVKNS WFRILQEYID HQVDDAVMAS BACU000422/1-541 TFEDSNLIPK EILWRPKEAF SDGITSVKNS WFRILQEYID HQVDDAVMAS 501 550 ENSP00000175506/1-561 AAQKFPFNTP KTKEGYYYRQ VFERHYPGRA DWLSHYWMPK WINATDPSAR ENSTTRP00000003281/1-561 AAQKFAVNPP KTKEGYYYRQ IFERHYPGRA DWLPHYWMPR WTSATDPSAR ENSBTAP00000004181/1-561 AAQKFPINTP KTKEGYYYRQ IFENHYPGRA DWLPHYWMPR WTNATDPSAR bmy_22377T0/1-561 AAQKFAVNTP KTKEGYYYRQ IFERHYPGRA DWLPHYWMPR WTSATDPSAR BACU000422/1-541 AAQKFAVNTP KTKEAYYYRQ IFERHYPGRA DWLPHYWMPR WTSATDPSAR 551 600 ENSP00000175506/1-561 TLTHYKSAVK A ENSTTRP00000003281/1-561 TLTHYKATAK A ENSBTAP00000004181/1-561 TLTHYKAAAK A bmy_22377T0/1-561 TLTHYKAAAK A BACU000422/1-541 TLTHYKAAAK A