KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:22 2014 Check: 00 .. Name: ENSP00000361900/1-309 Len: 430 Check: 4945 Weight: 1.00 Name: ENSBTAP00000004220/1-309 Len: 430 Check: 7869 Weight: 1.00 Name: ENSTTRP00000007206/1-232 Len: 430 Check: 6683 Weight: 1.00 Name: bmy_08777T0/1-430 Len: 430 Check: 4391 Weight: 1.00 Name: BACU015464/1-309 Len: 430 Check: 5809 Weight: 1.00 // 1 50 ENSP00000361900/1-309 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004220/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007206/1-232 ---------- ---------- ---------- ---------- ---------- bmy_08777T0/1-430 QAAPLPRSVP PSPGPGSRCI QILAVGASAQ ARFRTPRRRG PRRPPPILPV BACU015464/1-309 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000361900/1-309 ---MAPKFPD SVEELRAAGN ESFRNGQYAE ASALYGRALR VLQAQGSSDP ENSBTAP00000004220/1-309 ---MAPIPPA SVEELRTTGN QSFRNGQFAE AATLYSRALR MLQEQGSSDP ENSTTRP00000007206/1-232 ---MAPKLPD SVEELRAAGN LSFRNGQFAE AATLYSRALR MLQAQGSSDP bmy_08777T0/1-430 RRQMAPKLRD SVEELRAAGN LSFRNGQFAE AATLYSRALR MLQAQGSSDP BACU015464/1-309 ---MAPKLRD SVEELRAAGN LSFRNGQFAE AATLYSRALR MLQAQGSSDP 101 150 ENSP00000361900/1-309 EEESVLYSNR AACHLKDGNC RDCIKDCTS- ---------- ---------- ENSBTAP00000004220/1-309 EKESVLYSNR AACHLKDGNC IDCIKDCTS- ---------- ---------- ENSTTRP00000007206/1-232 EKESVLYSNR AACHLKDGNC IDCIKDCTS- ---------- ---------- bmy_08777T0/1-430 EKESVLYSNR AACHLKDGNC IDCIKDCTSQ SEIAFMVIAK LAHSKLKSPS BACU015464/1-309 EKESVLYSNR AACHLKDGNC IDCIKDCTS- ---------- ---------- 151 200 ENSP00000361900/1-309 ---------- ---------- ---------- ---------- -------ALA ENSBTAP00000004220/1-309 ---------- ---------- ---------- ---------- -------ALA ENSTTRP00000007206/1-232 ---------- ---------- ---------- ---------- -------ALA bmy_08777T0/1-430 SKTSQSSIVL SEMTSHVLSA ADATWKELRR GALVTQQPDD ISASCPRALA BACU015464/1-309 ---------- ---------- ---------- ---------- -------ALA 201 250 ENSP00000361900/1-309 LVPFSIKPLL RRASAYEALE KYPMAYVDYK TVLQIDDNVT SAVEGINRMT ENSBTAP00000004220/1-309 LVPFSLKPLL RRASAYEALE KYPLAYVDYV TVLQIDDSVM SALEGSSRMT ENSTTRP00000007206/1-232 LVPFGMKPLL RRASAYEALE KYTLAYMDYL TVLQIDDRVT SALEGSSRMT bmy_08777T0/1-430 LVPFGMKPLL RRASAYEALE KYTLAYMDYL TVLQIDDSVT SALEGSSRMT BACU015464/1-309 LVPFGMKPLL RRASAYEALE KYTLAYMDYL TVLQIDDSVT SALEGSSRMT 251 300 ENSP00000361900/1-309 RALMDSLGPE WRLKLPSIPL VPVSAQKRWN SLPSENHKEM AKSKSKETTA ENSBTAP00000004220/1-309 RTLMDSFGPE WRLKLPSIPL VPVSSQKRWE CLPLENHKEP SKSKSKGTTS ENSTTRP00000007206/1-232 RALMDSFGPE WRQKLPSIPL VPVSAQKRWE CLPSGDCKET AKSKSKETTA bmy_08777T0/1-430 RALTDSFGPE WRQKLPSIPL VPVSAQKRWE CLPSENCKET AKSKSKETTA BACU015464/1-309 RALMDSFGPD WRQKLPSVPL VPVSAQKRWE CLPSENCKET AKSKSKETTA 301 350 ENSP00000361900/1-309 TKNRVPSAGD VEKARVLKEE GNELVKKGNH KKAIEKYSES LLCSNLESAT ENSBTAP00000004220/1-309 TKSRVPSAGD VERARALKEE GNELVKKGNH KQAIEKYSES LWFSNLESAT ENSTTRP00000007206/1-232 TKSRVPSAGD VERARVLKEE GNELVKKGNH KQAIEKYNES LWFSNLESAT bmy_08777T0/1-430 TKSRVPSAGD VERARVLKEE GNELVKKGNH KQAIEKYSES LWFSNLESAT BACU015464/1-309 TKNRVPSAGD VERARVLKEE GNELVKKGNH KQAIEKYNES LWFSNLESAT 351 400 ENSP00000361900/1-309 YSNRALCYLV LKQYTEAVKD CTEALKLDGK NVKAFYRRAQ AHKALKDYKS ENSBTAP00000004220/1-309 YSNRALCHLE LKQFQEAVKD CTEALRLDGK NVKAFYRRAQ AYKALKDFRS ENSTTRP00000007206/1-232 YSN------- ---------- ---------- ---------- ---------- bmy_08777T0/1-430 YSNRALCHLV LKQYKEAVKD CTEALRLDGK NVKAFYRRAQ AYKALKDYKS BACU015464/1-309 YSNRALCHLV LKQYKEAVKD CTEALRLDGK NVKAFYRRAQ AYKALKDYKS 401 450 ENSP00000361900/1-309 SFADISNLLQ IEPRNGPAQK LRQEVKQNLH ENSBTAP00000004220/1-309 SFADIDSLLQ IEPRNGPAQK LRQEVNRSLN ENSTTRP00000007206/1-232 ---------- ---------- ---------- bmy_08777T0/1-430 SFADINSLLQ IEPRNGPAQK LRQEVNRSLN BACU015464/1-309 SFADINSLLQ IEPRNGPAQK LRQEVNRSLN