KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:22 2014 Check: 00 .. Name: bmy_08778T0/1-298 Len: 507 Check: 330 Weight: 1.00 Name: ENSP00000361892/1-487 Len: 507 Check: 9865 Weight: 1.00 Name: ENSBTAP00000004221/1-487 Len: 507 Check: 9419 Weight: 1.00 Name: BACU015463/1-447 Len: 507 Check: 9645 Weight: 1.00 Name: ENSTTRP00000007207/1-435 Len: 507 Check: 5943 Weight: 1.00 // 1 50 bmy_08778T0/1-298 MTPAALLKDK YTMNLKPQFD LALLKMGFLY EVVVSFACGL GKKQRDWSDY ENSP00000361892/1-487 METVQLRNPP RRQLKKLDED SLTKQPEEVF DVLEKLGEG- ---------- ENSBTAP00000004221/1-487 METVQLRNPP RRQLKKLDED SLTKQPEEVF DVLEKLGEG- ---------- BACU015463/1-447 MDLTRVL--- -RQLKKLDED SLTKQPEEVF DVLEKLGEG- ---------- ENSTTRP00000007207/1-435 METVQLRNPP RRQLKKLDED SLTKQPEEVF DVLEKLGEG- ---------- 51 100 bmy_08778T0/1-298 RNWAWTVFRS YGSVYKAIHK ETGQIVAIKQ VPVESDLQEI IKEISIMQQC ENSP00000361892/1-487 ---------S YGSVYKAIHK ETGQIVAIKQ VPVESDLQEI IKEISIMQQC ENSBTAP00000004221/1-487 ---------S YGSVYKAIHK ETGQIVAIKQ VPVESDLQEI IKEISIMQQC BACU015463/1-447 ---------S YGSVYKAIHK ETGQIVAIKQ VPVESDLQEI IKEISIMQQC ENSTTRP00000007207/1-435 ---------S YGSVYKAIHK ETGQIVAIKQ VPVESDLQEI IKEISIMQQC 101 150 bmy_08778T0/1-298 DSPHVVKYYG SYFKNTDLWI VMEYCGAGSV SDIIRLRNKT LTEDEIATIL ENSP00000361892/1-487 DSPHVVKYYG SYFKNTDLWI VMEYCGAGSV SDIIRLRNKT LTEDEIATIL ENSBTAP00000004221/1-487 DSPHVVKYYG SYFKNTDLWI VMEYCGAGSV SDIIRLRNKT LTEDEIATIL BACU015463/1-447 DSPHVVKYYG SYFKNTDLWI VMEYCGAGSV SDIIRLRNKT LTEDEIATIL ENSTTRP00000007207/1-435 DSPHVVKYYG SYFKNTDLWI VMEYCGAGSV SDIIRLRNKT LTEDEIATIL 151 200 bmy_08778T0/1-298 QSTLKGLEYL HFMRKIHRDI KAGNILLNTE GHAKLADFGV AGQLTDTMAK ENSP00000361892/1-487 QSTLKGLEYL HFMRKIHRDI KAGNILLNTE GHAKLADFGV AGQLTDTMAK ENSBTAP00000004221/1-487 QSTLKGLEYL HFMRKIHRDI KAGNILLNTE GHAKLADFGV AGQLTDTMAK BACU015463/1-447 QSTLKGLEYL HFMRKIHRDI KAGNILLNTE GHAKLADFGV AGQLTDTMAK ENSTTRP00000007207/1-435 QSTLKGLEYL HFMRKIHRDI KAGNILLNTE GHAKLADFGV AGQLTDTMAK 201 250 bmy_08778T0/1-298 RNTVIGTPFW MAPEVIQEIG YNCVADIWSL GITAIEMAEG KPPYADIHPM ENSP00000361892/1-487 RNTVIGTPFW MAPEVIQEIG YNCVADIWSL GITAIEMAEG KPPYADIHPM ENSBTAP00000004221/1-487 RNTVIGTPFW MAPEVIQEIG YNCVADIWSL GITAIEMAEG KPPYADIHPM BACU015463/1-447 RNTVIGTPFW MAPEVIQEIG YNCVADIWSL GITAIEMAEG KPPYADIHPM ENSTTRP00000007207/1-435 RNTVIGTPFW MAPEVIQEIG YNCVADIWSL GITAIEMAEG KPPYADIHPM 251 300 bmy_08778T0/1-298 RAIFMIPTNP PPTFRKPELW SDSFMDFVKQ CLIKSPEQRA TATQLLQV-- ENSP00000361892/1-487 RAIFMIPTNP PPTFRKPELW SDNFTDFVKQ CLVKSPEQRA TATQLLQHPF ENSBTAP00000004221/1-487 RAIFMIPTNP PPTFRKPELW SDSFMDFVKQ CLVKSPEQRA TATQLLQHPF BACU015463/1-447 RAIFMIPTNP PPTFRKPELW SDSFMDFVKQ CLIKSPEQRA TATQLLQHPF ENSTTRP00000007207/1-435 RAIFMIPTNP PPTFRKPELW SDSFMDFVKQ CLIKSPEQRA TATQLLQHPF 301 350 bmy_08778T0/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000361892/1-487 VRSAKGVSIL RDLINEAMDV KLKRQESQQR EVDQDDEENS EEDEMDSGTM ENSBTAP00000004221/1-487 VKSAKGVSIL RDLINEAMDV KLKRQEAQQR EVDQEEEENS EEDELDSGTM BACU015463/1-447 VKSAKGVSIL RDLINEAMDV KLKRQEAQQR EVDQDDEENS EEDEMDSGTM ENSTTRP00000007207/1-435 VKSAKGVSIL RDLINEAMDV KLKRQEAQQR EVDQDDEENS EEDEMDSGTM 351 400 bmy_08778T0/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000361892/1-487 VRAVGDEMGT VRVASTMTDG ANTMIEHDDT LPSQLGTMVI NAEDEEEEGT ENSBTAP00000004221/1-487 VRAAGDEMGT VRVASSMSDG ANTMIEHDDT LPSQLGTMVI NTEDEEEEGT BACU015463/1-447 VRAAGDEMGT VRVASTISDG ANTMIEHDDT LPSQLGTMVI NSEEEEEEGT ENSTTRP00000007207/1-435 VRAAGDEMGT VRVASTMSDG ANTMIEHDDT LPSQLGTMVI NSEEEEEEGT 401 450 bmy_08778T0/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000361892/1-487 MKRRDETMQP AKPSFLEYFE QKEKENQINS FGKSVPGPLK NSSDWKIPQD ENSBTAP00000004221/1-487 MKRRDETMQP ARPSFLEYFE QKEKENQINS FGKSVPGPLQ NSSDWKVPQD BACU015463/1-447 MKRRDETMQP ARPSFLEYFE QKEKENQINS FGKSVPGPLK NSSDWKVPQD ENSTTRP00000007207/1-435 MKRRDETMQP ARPSFLEYFE QKEKENQINS FGKSVPGPLK NSSDWKVPQD 451 500 bmy_08778T0/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000361892/1-487 GDYEFLKSWT VEDLQKRLLA LDPMMEQEIE EIRQKYQSKR QPILDAIEAK ENSBTAP00000004221/1-487 GDYEFLKSWT VEDLQKRLLA LDPMMEQEIE EIRQKYQSKR QPILDAIEAK BACU015463/1-447 GDYEF----- ---------- --------VS RLGSRWSCLR GKVV------ ENSTTRP00000007207/1-435 GDYEF----- ---------- ---------- ---------- ---------- 501 550 bmy_08778T0/1-298 ------- ENSP00000361892/1-487 KRRQQNF ENSBTAP00000004221/1-487 KRRQQNF BACU015463/1-447 ------- ENSTTRP00000007207/1-435 -------