KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:23 2014 Check: 00 .. Name: ENSP00000253727/1-460 Len: 592 Check: 1844 Weight: 1.00 Name: ENSBTAP00000004229/1-498 Len: 592 Check: 8763 Weight: 1.00 Name: bmy_14007T0/1-520 Len: 592 Check: 5276 Weight: 1.00 Name: BACU008289/1-449 Len: 592 Check: 9255 Weight: 1.00 Name: ENSTTRP00000002263/1-446 Len: 592 Check: 7332 Weight: 1.00 // 1 50 ENSP00000253727/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004229/1-498 ---------- ---------- ---------- ---------- ---------- bmy_14007T0/1-520 MGPELFRQPS VELSGSDARW GCRKKWRTRA APGCFQGNGS RGPPREAAHE BACU008289/1-449 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002263/1-446 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000253727/1-460 ---------- ---------- ---------- --------MS SPTTSSLDTP ENSBTAP00000004229/1-498 ---------- ---------- ---------- --------MS TPTTNSVDTP bmy_14007T0/1-520 TLARSHEPRP PLVFGEGRDL ERGVGAEYDG RRLLRDPTMS TPATSSLDTP BACU008289/1-449 ---------- ---------- ---------- --------MS TPATSSLDTP ENSTTRP00000002263/1-446 ---------- ---------- ---------- --------MS TPATSSLDTP 101 150 ENSP00000253727/1-460 LPGNGPPQPG APSSSPTVKE EGPEPWPGGP DPDVPGTDEA SSACSTDWVI ENSBTAP00000004229/1-498 LPGNGPS--- TPSSSPGGKE DGPEPCPGGA DPDVPSTDGA DSASVV--VI bmy_14007T0/1-520 LPGNGPS--- TPSSSPDGKE DGSEPCP-GA DPDVPGTNGA NSASVV--VI BACU008289/1-449 LPGNGPS--- TPSSSPDGKE DGSEPCP-GA DPDVPGTDGA NSASVV--VI ENSTTRP00000002263/1-446 LPGNGPS--- TPSSSPDGKE DGPEPCP-GA DPDVPGTDGA NSASVV--VI 151 200 ENSP00000253727/1-460 PDPEEEPERK RKKGPAPKML GHELCRVCGD KASGFHYNVL SCEGCKGFFR ENSBTAP00000004229/1-498 LDTAEEPERK RKKGPAPKML GDELCQVCGD TASGFHYNVL SCEGCKGFFR bmy_14007T0/1-520 LDTAEEPERK RKKGPAPKML GDELCQVCGD TASGFHYNVL SCEGCKGFFR BACU008289/1-449 LDTAEEPERK RKKGPAPKML GDELCQVCGD TASGFHYNVL SCEGCKGFFR ENSTTRP00000002263/1-446 LDTAEEPERK RKKGPAPKML GDELCQVCGD TASGFHYNVL SCEGCKGFFR 201 250 ENSP00000253727/1-460 RSVVRGGARR YACRGGGTCQ MDAFMRRKCQ QCRLRKCKEA GMREQCVLSE ENSBTAP00000004229/1-498 RSVIRGGAGR YACRGGGTCQ MDAFMRRKCQ QCRLRKCKEA GMREQCVLSK bmy_14007T0/1-520 RSVIRGGAGR YACRGGGTCQ MDAFMRRKCQ QCRLRKCKEA GMREQCVLSK BACU008289/1-449 RSVIRGGAGR YACRGGGTCQ MDAFMRRKCQ QCRLRKCKEA GMREQCVLSK ENSTTRP00000002263/1-446 RSVIRGGAGR YACRGGGTCQ MDAFMRRKCQ QCRLRKCKEA GMREQCVLSK 251 300 ENSP00000253727/1-460 EQIRKKKIRK QQQESQSQSQ SPVGPQGSSS S-ASGPGASP GGSEAGSQGS ENSBTAP00000004229/1-498 EQIRKKKIRK QQQQQQQQS- SPTGPGVSSS SPASGPGASP GGSDGGGQGS bmy_14007T0/1-520 EQIRKKKIRK QQQQS----- SPTGLGVGSS S-ASGPGASP GGSDGGGQGS BACU008289/1-449 EQIRKKKIRK QQQQS----- SPTGLGVGSS S-ASGPGASP GGSDGGGQGS ENSTTRP00000002263/1-446 EQIRKKKIRK QQQQS----- SPTGLGVSSS S-ASGPGASP GGSDGGGQGS 301 350 ENSP00000253727/1-460 GEGEGVQLTA AQELMIQQLV AAQLQCNKRS FSDQPKVTPW PLGADPQSRD ENSBTAP00000004229/1-498 GEGEGVQLTA AQELMIQQLV AAQLQCNKRS FSDQPKVTPW PLGADPQSRD bmy_14007T0/1-520 GEGEGVQLTA AQELMIQQLV AAQLQCNKRS FSDQPKVTPW PLGADPQSRD BACU008289/1-449 GEGEGVQLTA AQELMIQQLV AAQLQCNKRS FSDQPKVTPW PLGADPQSRD ENSTTRP00000002263/1-446 GEGEGVQLTA AQELMIQQLV AAQLQCNKRS FSDQPKVTPW P-GADPQSRD 351 400 ENSP00000253727/1-460 ARQQRFAHFT ELAIISVQEI VDFAKQVPGF LQLGREDQIA LLKASTIEIM ENSBTAP00000004229/1-498 ARQQRFAHFT ELAIISVQEI VDFAKQVPGF LQLGREDQIA LLKASTIEIM bmy_14007T0/1-520 ARQQRFAHFT ELAIISVQEI VDFAKQVPGF LQLGREDQIA LLKASTIEGR BACU008289/1-449 ARQQRFAHFT ELAIISVQEI VDFAKQVPGF LQLGREDQIA LLKASTIEIM ENSTTRP00000002263/1-446 A-QQRFAHFT EL-IISVQEI VDFAKQVPGF LQLGREDQIA LLKASTIEIM 401 450 ENSP00000253727/1-460 LLETARRYNH ETECITFLKD FTYSKDDFHR AGLQVEFINP IFEFSRAMRR ENSBTAP00000004229/1-498 LLETARRYNH ETECITFLKD FTYSKDDFHR AGLQVEFINP IFEFSRAMRR bmy_14007T0/1-520 GGSSVHRAGP PTS------- ---------- AGLQVEFINP IFEFSRAMRR BACU008289/1-449 LLETARRYNH ETECITFLKD FTYSKDDFHR AGLQVEFINP IFEFSRAMRR ENSTTRP00000002263/1-446 LLETARRYNH ETECITFLKD FTYSKDDFHR AGLQVEFINP IFEFSRAMRR 451 500 ENSP00000253727/1-460 LGLDDAEYAL LIAINIFSAD RPNVQEPGRV EALQQPYVEA LLSYTRIKRP ENSBTAP00000004229/1-498 LGLDDAEYAL LIAINIFSAD RPNVQEPSRV EALQQPYVDA LLSYTRIKRP bmy_14007T0/1-520 LGLDDAEYAL LIAINIFSAD RPNVQEPSRV EALQQPYVDA LLSYTRIKRP BACU008289/1-449 LGLDDAEYAL LIAINIFSAD RPNVQEPSRV EALQQPYVDA LLSYTRIKRP ENSTTRP00000002263/1-446 LGLDDAEYAL LIAINIFSAD RPNVQEPSRV EALQQPYVDA LLSYTRIKRP 501 550 ENSP00000253727/1-460 QDQLRFPRML MKLVSLRTLS SVHSEQVFAL RLQDKK---- ---------- ENSBTAP00000004229/1-498 QDQLRFPRML MKLVSLRTLS SVHSEQSSPC GSRTRSCHLC CLRSGTSTSE bmy_14007T0/1-520 QDQLRFPRML MKLVSLRTLS SVHSEQVFAL RLQDKK---- ---------- BACU008289/1-449 QDQLRFPRML MKLVSLRTLS SVHSEQVFAL RLQDKK---- ---------- ENSTTRP00000002263/1-446 QDQLRFPRML MKLVSLRTLS SVHSEQVFAL RLQDKK---- ---------- 551 600 ENSP00000253727/1-460 -------LPP L--------L SEIWDVHE-- ---------- -- ENSBTAP00000004229/1-498 GPAPPPCTPP MTGHWGRKGL GRVWAPALRL GAKALAPRQS SG bmy_14007T0/1-520 -------LPP L--------L SEIWDVHE-- ---------- -- BACU008289/1-449 -------LPP L--------L SEIWDVHE-- ---------- -- ENSTTRP00000002263/1-446 -------LPP L--------L SEIWDVHE-- ---------- --