KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:27 2014 Check: 00 .. Name: bmy_05539T0/1-336 Len: 386 Check: 3436 Weight: 1.00 Name: ENSP00000350136/1-386 Len: 386 Check: 9781 Weight: 1.00 Name: ENSBTAP00000004262/1-386 Len: 386 Check: 9825 Weight: 1.00 Name: ENSTTRP00000016589/1-386 Len: 386 Check: 537 Weight: 1.00 Name: BACU017017/1-386 Len: 386 Check: 462 Weight: 1.00 // 1 50 bmy_05539T0/1-336 MVSF-----L YIS------- ---------- ---------- ---------- ENSP00000350136/1-386 MCSSVAAKLW FLTDRRIRED YPQKEILRAL KAKCCEEELD FRAVVMDEVV ENSBTAP00000004262/1-386 MCSSVAAKLW FLTDRRIRED YPQKEILRAL KAKCCEEELD FRAVVMDELV ENSTTRP00000016589/1-386 MCSSVAAKLW FLTDRRIRED YPQKEILRAL KAKCCEEELD FRAVVMDEVV BACU017017/1-386 MCSSVAAKLW FLTDRRIRED YPQKEILRAL KAKCCEEELD FRAVVMDEVV 51 100 bmy_05539T0/1-336 --------GL RINGELITAY PQVVVVRVPT PWVQSDSDIT VLRHLEKMGC ENSP00000350136/1-386 LTIEQGNLGL RINGELITAY PQVVVVRVPT PWVQSDSDIT VLRHLEKMGC ENSBTAP00000004262/1-386 LTVEQGNLGL RINGELITAY PQVVVVRVPT PWVQSDSDIT VLRHLEKMGC ENSTTRP00000016589/1-386 LTVEQGNLGL RINGELITAY PQVVVVRVPT PWVQSDSDIT VLRHLEKMGC BACU017017/1-386 LTVEQGNLGL RINGELITAY PQVVVVRVPT PWVQSDSDIT VLRHLEKMGC 101 150 bmy_05539T0/1-336 RLMNRPQAIL NCVNKFWTFQ ELAGHGVPLP DTFSYGGHEN FAKMIDEAEV ENSP00000350136/1-386 RLMNRPQAIL NCVNKFWTFQ ELAGHGVPLP DTFSYGGHEN FAKMIDEAEV ENSBTAP00000004262/1-386 RLMNRPQAIL NCVNKFWTFQ ELAGHGVPLP DTFSYGGHEN FAKMIDEAEV ENSTTRP00000016589/1-386 RLMNRPQAIL NCVNKFWTFQ ELAGHGVPLP DTFSYGGHEN FAKMIDEAEV BACU017017/1-386 RLMNRPQAIL NCVNKFWTFQ ELAGHGVPLP DTFSYGGHEN FAKMIDEAEV 151 200 bmy_05539T0/1-336 LEFPMVVKNT RGHRGKAVFL ARDKHHLADL SHLIRHEAPY LFQKYVKESH ENSP00000350136/1-386 LEFPMVVKNT RGHRGKAVFL ARDKHHLADL SHLIRHEAPY LFQKYVKESH ENSBTAP00000004262/1-386 LEFPMVVKNT RGHRGKAVFL ARDKHHLADL SHLIRHEAPY LFQKYVKESH ENSTTRP00000016589/1-386 LEFPMVVKNT RGHRGKAVFL ARDKHHLADL SHLIRHEAPY LFQKYVKESH BACU017017/1-386 LEFPMVVKNT RGHRGKAVFL ARDKHHLADL SHLIRHEAPY LFQKYVKESH 201 250 bmy_05539T0/1-336 GRDVRVIVVG GRVVGTMLRC STDGRMQSNC SLGGVGMMCS LSEQGKQLAI ENSP00000350136/1-386 GRDVRVIVVG GRVVGTMLRC STDGRMQSNC SLGGVGMMCS LSEQGKQLAI ENSBTAP00000004262/1-386 GRDVRVIVVG GRVVGTMLRC STDGRMQSNC SLGGVGMMCS LSEQGKQLAI ENSTTRP00000016589/1-386 GRDVRVIVVG GRVVGTMLRC STDGRMQSNC SLGGVGMMCS LSEQGKQLAI BACU017017/1-386 GRDVRVIVVG GRVVGTMLRC STDGRMQSNC SLGGVGMMCS LSEQGKQLAI 251 300 bmy_05539T0/1-336 QVSNILGMDV CGIDLLMKDD GSFCVCEANA NVGFIAFDKA CNLDVAGIIA ENSP00000350136/1-386 QVSNILGMDV CGIDLLMKDD GSFCVCEANA NVGFIAFDKA CNLDVAGIIA ENSBTAP00000004262/1-386 QVSNILGMDV CGIDLLMKDD GSFCVCEANA NVGFIAFDKA CNLDVAGIIA ENSTTRP00000016589/1-386 QVSNILGMDV CGIDLLTKDD GSFCVCEANA NVGFIAFDKA CNLDVAGIIA BACU017017/1-386 QVSNILGMDV CGIDLLMKDD GSFCVCEANA NVGFIAFDKA CNLDVSGIIA 301 350 bmy_05539T0/1-336 DYAASLLPSG RLTRRMSLLS VVSTASETSE PELGPPANTA VDNMSASSSS ENSP00000350136/1-386 DYAASLLPSG RLTRRMSLLS VVSTASETSE PELGPPASTA VDNMSASSSS ENSBTAP00000004262/1-386 DYAASLLPSG RLTRRMSLLS VVSTASETSE PELGPQANTA VDNMSASSSS ENSTTRP00000016589/1-386 DYAASLLPSG RLTRRMSLLS VVSTASETSE PELGPPANTA VDNMSASSSS BACU017017/1-386 DYAASLLPSG RLTRRMSLLS VVSTASETSE PELGPPANTA VDNMSASSSS 351 400 bmy_05539T0/1-336 VDSDPETTER ELLTKLPGGL FNMNQLLANE IKLLVE ENSP00000350136/1-386 VDSDPESTER ELLTKLPGGL FNMNQLLANE IKLLVD ENSBTAP00000004262/1-386 VDSDPETTER ELLTKLPGGL FNMNQLLANE IKLLVE ENSTTRP00000016589/1-386 VDSDPETTER ELLTKLPGGL FNMNQLLANE IKLLVE BACU017017/1-386 VDSDPETTER ELLTKLPGGL FNMNQLLANE IKLLVE