KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:30 2014 Check: 00 .. Name: ENSP00000257570/1-514 Len: 895 Check: 4729 Weight: 1.00 Name: ENSBTAP00000004270/1-352 Len: 895 Check: 9754 Weight: 1.00 Name: ENSTTRP00000001835/1-349 Len: 895 Check: 538 Weight: 1.00 Name: bmy_05762T0/1-535 Len: 895 Check: 5578 Weight: 1.00 Name: BACU010533/1-889 Len: 895 Check: 4323 Weight: 1.00 // 1 50 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 MHQRQQTYPH FRPAHKCPVT LHLRFATESL RPHYSIPQTL RSFLGVLIAI 51 100 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 CRRGHRKKAV MGAHSSTMSR SSVSAVDTVP VSVARGQPVP PTTPRCVPNS 101 150 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 SRCTEKTALR ALGESGKGMA KQEEVPTVTG RNDDRRSGPD GTGGTRSAFR 151 200 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 PLGVSFFVPR PGPLQIHLDA KRAEDRYKRK LQISFMSSCR QRNAITSSYS 201 250 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 STRGFPPVQR RRGPAIPQGL PQKSSKKGSE EGRPSPSAAP VVSQSKSQPD 251 300 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU010533/1-889 KDAEATRGQK RTWRNCSPTS DSPRPRKRRI PLLLHRRGEP LRLPSPPELG 301 350 ENSP00000257570/1-514 ---------- ---------- ---------- ---------- ---MALMQEL ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---MAVSLEL ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---MAVPPEL bmy_05762T0/1-535 ---------- ---------- ---------- ---------M KDSSGQSKPY BACU010533/1-889 FRVTAEHLDA EKEAALRRIN SALRRLQMLE TFPPEIQAFM KDSSGQSKPY 351 400 ENSP00000257570/1-514 YSTPASRLDS FVAQWLQP-- --------HR EWKEEVLDAV RTVEEFLRQE ENSBTAP00000004270/1-352 FDTPASRLNS FVAQCQHN-- --------IK EWKEDVVKAV QSVEKFLKKQ ENSTTRP00000001835/1-349 FVTPASRLNS FVAHCLHP-- --------SQ KWKKEVLETV QTMEQFLREQ bmy_05762T0/1-535 AIDPEDSIHD LKEKIEEAGG PYMENQILRF GLKQVM---- ---------- BACU010533/1-889 AIDPEDSIHD LKEKIEEAGG PYMEDQILSQ EWKKEVLETV QTVEQFLREQ 401 450 ENSP00000257570/1-514 HFQGKRGLDQ DVR---VLKV VKVGSFGNGT VLRSTREVEL VAFLSCFHSF ENSBTAP00000004270/1-352 RFRGDHGLDQ K-----VLKV IRVGSFGNGT VLRNHAEVEL VMFLSGFSSF ENSTTRP00000001835/1-349 SFQGEHGLDQ ESG---VLKV VKVGSFGNGT VLRDSSEVEL VMLLSGFHSF bmy_05762T0/1-535 ----KPGLER SSLSACILPL EKVGSFGNGT VLRDSSEVEL VMVLSGFHSF BACU010533/1-889 SFQGEHGLDQ ELW---VLKV VKVGSFGNGT VLRDSSEVEL VMVLSGFHSF 451 500 ENSP00000257570/1-514 QEAA---KHH KDVLRLIWKT MWQSQDLLDL GLEDLRMEQR VPDALVFTIQ ENSBTAP00000004270/1-352 QEEASNHNHH EHVLSMLCEK LTDFPDLLHL QPQNLRLVHG VTSAVAFTIQ ENSTTRP00000001835/1-349 QEEA---RHH DDVLSLLCEK LRYCQDLLSL QLQDLRLVQG VHSAVAFTIQ bmy_05762T0/1-535 QEEA---RRL DDVLSLLCEK LRYCQDLRSL QLQDLRLVQG VPSAVAFTIQ BACU010533/1-889 QEEA---RRL DDVLSLLCEK LRYCQDLRSL QLQDLRLVQG VPSAVAFTIQ 501 550 ENSP00000257570/1-514 TRGTAEPITV TIVPAYRALG PSLPNSQPPP EVYVSLIKAC GGPGNFCPSF ENSBTAP00000004270/1-352 TWEMEEQVTV TIVPAYGVLR PSVPNFQPSP EVYVRLIKAC RTLGYFSPSF ENSTTRP00000001835/1-349 SWETAEPITV TIVPAYSVLG PSVPNSHPSP EVYVSLIKAC GSPGHFSPSF bmy_05762T0/1-535 SWETAEPITV TVVPAYGVLG PSVPNSHPSP EVYVSLIKAC GSPGHFSPSF BACU010533/1-889 SWETAEPITV TVVPAYGVLG PSVPNPHPSP EVYVSLIKAC GSPGHFSPSF 551 600 ENSP00000257570/1-514 SELQRNFVKH RPTKLKSLLR LVKHWYQQYV KARSPRANLP PLYALELLTI ENSBTAP00000004270/1-352 SELQRNFVKY KPTKLKSLLR LVKHWYLEYV KAKCPRAELP PMYALELLTI ENSTTRP00000001835/1-349 SELQRNFVKH RPAKLKSLLR LVKHWYLEXX XXXXXXXXXX XXXXXXXXXX bmy_05762T0/1-535 SELQRNFVKH RPAQLKSLLR LVKHWYLEFV KAWCLRAELP PLYALELLTV BACU010533/1-889 SELQRNFVKH RPAQLKSLLR LVKHWYLECV KAWCLRAELP PLYALELLTV 601 650 ENSP00000257570/1-514 YAWEMGTEED ENFMLDEGFT TVMDLLLEYE VICIYWTKYY TLHNAIIEDC ENSBTAP00000004270/1-352 YAWETGTEEK ERFRLDKGLV TVLLLLTKYQ RLCIYWTKYY TLQNPVIEDF ENSTTRP00000001835/1-349 XXXXXXXXXX XXXXXXXXXX XXXXXXXXYK FLCIYWTNYY TFQNPIIEDF bmy_05762T0/1-535 YAWEVGTQEK ECFRLDRGLA TVMSLLQQYQ FLCIYWTKYY TFQNPIIEDF BACU010533/1-889 YAWEVGAQEK ECFRLDRGLA TVMSLLQQYQ FLCIYWTKYY TFQNPIIEDF 651 700 ENSP00000257570/1-514 VRKQLKKERP IILDPADPTL NVAEGYRWDI VAQRASQCLK QDCCYDNREN ENSBTAP00000004270/1-352 VRNQLKEKRP IILDPADPTY NVATGYRWDI VAQSARHCLK QSCCYDNNET ENSTTRP00000001835/1-349 VRKQLKKERP IILDPADPTH NVAKGYRWDI VAQRACQCLK QDCCYDNYDN bmy_05762T0/1-535 VRKQLRKERP IILDPADPTH NVAKGYRWDI VAQRACQCLK QDCCYDNNEN BACU010533/1-889 VRKQLRKERP IILDPADPTH NVAKGYRWDI VAQRACQCLK QDCCYDDNEN 701 750 ENSP00000257570/1-514 PISSWNVKRA RDIHLTVEQR GYPDFNLIVN PYEPIRKVKE KIRRTRGYSG ENSBTAP00000004270/1-352 CIPNWKLKFA ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 PVSRWNVK-- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 PVPRWNVKGA RDIQVTVEQW GFSDFIITVN PYDSIKKVKG KIQGNLGSTA BACU010533/1-889 PVPTWNVKGA RDIQVTVEQW GFSDFIITVN PYDSIKKVKG KIQGNLGSTA 751 800 ENSP00000257570/1-514 LQRLSFQVPG SERQLLSSRC SLAKYGIFSH THIYLLETIP SEIQVFVKNP ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 LQRLSFQEPG GERQLLSSQY SLANYGVFSN TRICLLQTIS PEIQVFVKNP BACU010533/1-889 LQRLSFQEPG GERQLLSSQY SLADYGVFSN TRICLLQTIS PEIQVFVKNP 801 850 ENSP00000257570/1-514 DGGSYAYAIN PNSFILGLKQ QIEDQQGLPK KQQQLEFQGQ VLQDWLGLGI ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ---------- bmy_05762T0/1-535 SGGSHAYAIC PDSLVLNLKL QIEFKEGLLR KEQQLEFQGQ VLQDGWSLRS BACU010533/1-889 SGGSHAYAIC PDSLVLNLKL QIEFKEGLLR KEQQLEFQGQ VLQDGWSLRS 851 900 ENSP00000257570/1-514 YGIQDSDTLI LSK--KKGEA LFPAS----- ---------- ----- ENSBTAP00000004270/1-352 ---------- ---------- ---------- ---------- ----- ENSTTRP00000001835/1-349 ---------- ---------- ---------- ---------- ----- bmy_05762T0/1-535 CGVQDSTTLT LKKEEERGKK TNPASSSERP LCAFLPFNPD PISST BACU010533/1-889 YGVQDSTTFT LKKEEERGKK TNPASSSERP LCAFLPFNPD PISST