KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:34 2014 Check: 00 .. Name: ENSP00000366729/1-255 Len: 260 Check: 1144 Weight: 1.00 Name: ENSBTAP00000004288/1-254 Len: 260 Check: 7861 Weight: 1.00 Name: bmy_08799T0/1-224 Len: 260 Check: 7418 Weight: 1.00 Name: ENSTTRP00000014501/1-255 Len: 260 Check: 260 Weight: 1.00 Name: BACU003017/1-260 Len: 260 Check: 8103 Weight: 1.00 // 1 50 ENSP00000366729/1-255 -----MGNSC YNIVATLLLV LNFERTRSLQ DPCSNCPAGT FCDNNRNQIC ENSBTAP00000004288/1-254 -----MGNGY YNIVATVLLV MNLERTRSLQ DFC-NCSAGT FCGKSNPELC bmy_08799T0/1-224 -----MGNCY YNIVATVLLV MNFERTRSLQ DFCSNCSAGT FCGKNKHELC ENSTTRP00000014501/1-255 -----MGNCY YNIVATVLLV MNFERTRSLQ DFCSNCSAGT FCGKNKHELC BACU003017/1-260 MQDFIMGNCY YNIVATVLLV MNFERTRSLQ DFCSNCSAGT FCGKNKHELC 51 100 ENSP00000366729/1-255 SPCPPNSFSS AGGQRTCDIC RQCKGVFRTR KECSSTSNAE CDCTPGFHCL ENSBTAP00000004288/1-254 ISCPLNSFSS TSGQKSCDIC RKCEGIFRIK KPCSSTSNAE CECIPGFHCE bmy_08799T0/1-224 TPCPSNSFSS TSGQKTCDVC RKCEGVFRTK KACSSTSNAE CECVSGFYCL ENSTTRP00000014501/1-255 TPCPSNSFSS TSGQKACDVC RKCEGVFRTK KACSSTSNAE CECVPGFYCL BACU003017/1-260 TPCPSNSFSS TSGQKTCDVC RKCEGVFRTK KACSSTSNAE CECVSGFYCL 101 150 ENSP00000366729/1-255 GAGCSMCEQD CKQGQELTKK GCKDCCFGTF NDQKRGICRP WTNCSLDGKS ENSBTAP00000004288/1-254 GAGCSMCEKD CKQGQELTNE GCKDCSFGTF NDQEHGICRP WTDCSLNGKA bmy_08799T0/1-224 GEGCTMCEED CKQGQELTKE GCKDCSFGTF NDREHGDCKP WTDCSLDGKS ENSTTRP00000014501/1-255 GEGCNMCEED CKQGQELTKE GCKDCSFGTF NDREHGDCKP WTDCSLDGKS BACU003017/1-260 GEGCTMCEED CKQGQELTKE GCKDCSFGTF NDREHGDCKP WTDCSLDGKS 151 200 ENSP00000366729/1-255 VLVNGTKERD VVCGPSPADL SPGASSVTPP APAREPGHSP QIISFFLALT ENSBTAP00000004288/1-254 VLVNGTKESD VVCGPPSSDF SPGASSTIVP APGREPGLTS QIVIFFLALT bmy_08799T0/1-224 VLVNGTKESD VVCGPASADF SPGASSTVMP APGGEPGHTT RIIIFFLALT ENSTTRP00000014501/1-255 VLVNGTKESD VVCGPASADF SPGASSTVMP APGGEPGHTN RIIIFFLALT BACU003017/1-260 VLVNGTKESD VVCGPASADF SPGASSTVMP APGGEPGHTT RIIIFFLALT 201 250 ENSP00000366729/1-255 STALLFLLFF LTLRFSVVKR GRKKLLYIFK QPFMRPVQTT QEEDGCSCRF ENSBTAP00000004288/1-254 SAAMLCLASF VVLRFSVIKQ GRKKLLYIFK QPFMRPVQTA QEEDACSCRF bmy_08799T0/1-224 STAVLFLASF VVLRFSVM-- ---KYLHLAR SLLF------ ---------- ENSTTRP00000014501/1-255 STAVLFLASF VVLRFSVVKQ GRKKLLYIFK QPFMRPVQTA QEEDACSCRF BACU003017/1-260 STAVLFLASF VVLRFSVVKQ GRKKLLYIFK QPFMRPVQTA QEEDACSCRF 251 300 ENSP00000366729/1-255 PEEEEGGCEL ENSBTAP00000004288/1-254 PEEEEGECEL bmy_08799T0/1-224 ---------- ENSTTRP00000014501/1-255 PEEEEGVCEL BACU003017/1-260 PEEEEGECEL