KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:39 2014 Check: 00 .. Name: ENSTTRP00000015565/1-354 Len: 391 Check: 520 Weight: 1.00 Name: ENSP00000329468/1-381 Len: 391 Check: 2631 Weight: 1.00 Name: BACU013931/1-231 Len: 391 Check: 5772 Weight: 1.00 Name: bmy_08846T0/1-369 Len: 391 Check: 1830 Weight: 1.00 Name: ENSBTAP00000004328/1-383 Len: 391 Check: 3856 Weight: 1.00 // 1 50 ENSTTRP00000015565/1-354 ---------- ---------- ---------- --PDWASYKL GIFICLNCSG ENSP00000329468/1-381 MGDRERNKKR LLELLRAPDT GNAHCADCGA ADPDWASYKL GIFICLNCCG BACU013931/1-231 ---------- ---------- ---------- ---------- ---------- bmy_08846T0/1-369 MGDRERNKKR LLELLQAAGT GNAHCADCGT ADPDWASYKL GIFICLNCSG ENSBTAP00000004328/1-383 MGDRERNKKR LLELLQAAGT GNAYCADCGA ADPDWASYKL GIFICLNCSG 51 100 ENSTTRP00000015565/1-354 VHRNFPDISK VKSVRLDFWD DSIVEXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000329468/1-381 VHRNFPDISR VKSVRLDFWD DSIVEFMIHN GNLRVKAKFE ARVPAF---- BACU013931/1-231 ---------- ---------- ------MTHN GNLRVKAKYE ARVPAF---- bmy_08846T0/1-369 VHRNFPDISK VKS------- -----FMTHN GNLRVKAKYE ARVPAF---- ENSBTAP00000004328/1-383 VHRNFPDISK VKSVRLDFWD DSIVEFMTHN GNLRVKTKYE ARVPAF---- 101 150 ENSTTRP00000015565/1-354 XXXXXXXXXX XXVLKEQWIR AKYERQEFMA EGKTISPP-- GNREGFLWKR ENSP00000329468/1-381 --YYIPQAND CLVLKEQWIR AKYERREFMA DGETISLP-- GNREGFLWKR BACU013931/1-231 --YYIPKASD CMVLKEQWIR AKYERQEFTA EGKTISPP-- GNREGFLWKR bmy_08846T0/1-369 --YYIPQASD CMVLKEQWIR AKYERQEFMA EGKTISPP-- GNREGFLWKR ENSBTAP00000004328/1-383 --YYIPQAND CMVLKEQWIR AKYERQEFMA DGKTISPPVA GNREGFLWKR 151 200 ENSTTRP00000015565/1-354 GRDNAQFLKR RFVLLAREGL LKYYTKEEGK EPKAVISIKD LNATFQTEKI ENSP00000329468/1-381 GRDNSQFLRR KFVLLAREGL LKYFTKEQGK SPKAVISIKD LNATFQTEKI BACU013931/1-231 GRDNAQFLRR RFVLLAREGL LKYYTKEEGK GPKAVISIKD LNATFQTEKI bmy_08846T0/1-369 GRDNAQFLRR RFVLLAREGL LKYYTKEEGK GPKAVISIKD LNATFQTEKI ENSBTAP00000004328/1-383 GRDNAQFLKR RFVLLAREGL LKYYTKEEGK DPKAVISIKD LNATFQTEKI 201 250 ENSTTRP00000015565/1-354 GNPHGLQITY RREGHVRNLF VYHESGKXXX XXXXXXXXXX XXXXXXXXXX ENSP00000329468/1-381 GHPHGLQITY RRDGHTRNLF VYHESGKEIV DWFNALRAAR LQYLKMAFPE BACU013931/1-231 GNPHGLQITY RREGHVRNLF VYHESGKEIV DWFNALRAAR LQYLKMAFPE bmy_08846T0/1-369 GNPHGLQITY RREGHVRNLF VYHESGKEIV DWFNALRAAR LQYLKMAFPE ENSBTAP00000004328/1-383 GNPHGLQITY RRDGRVRNLF VYHENGKEIV DWFNALRAAR LQYLKMAFPE 251 300 ENSTTRP00000015565/1-354 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXX--XXXX XXXXXXXXXX ENSP00000329468/1-381 LPESELVPFL TRNYLKQGFM EKTGPKQKEP FKKR--WFAL DCHERRLLYY BACU013931/1-231 LPEPELVPLI TRNYLKQGFM EKTGPKVYPP LPGRLSW--- ---------- bmy_08846T0/1-369 LPEPELVPLI TRNYLKQGFM EKTGPKQREP FKKR--WFAL DPQERRLLYY ENSBTAP00000004328/1-383 LPESELVPLI TRNYLKQGFM EKTGPKQREP FKKR--WFAL DPQERRLLYY 301 350 ENSTTRP00000015565/1-354 XXXXDAFEQG QVFLGSDEQG YQVYEDLPKG IRGNRWKAGI TVVTPQRRFI ENSP00000329468/1-381 KNPLDAFEQG QVFLGNKEQG YEAYEDLPKG IRGNRWKAGL TIVTPERRFV BACU013931/1-231 --PLSQWAVG QN-LGGGKMG KQ-------G QRGRR----- ---------- bmy_08846T0/1-369 KNPLDAFEQG QVFLGSDEQG YQVYEDLPKG IRGNRWKAGI TIVTPQRRFI ENSBTAP00000004328/1-383 KNPLKNFEXG QVFLGSNEQG YQVFEDLPKG IRGNRWKAGL TIVTPHRRFV 351 400 ENSTTRP00000015565/1-354 FTCPSEKEQR EWTESLRDVL SRPLTPLNLL TASTESGYSS - ENSP00000329468/1-381 LTCPSEKEQQ EWLESLRGVL SSPLTPLNRL TASTESGRSS R BACU013931/1-231 ---------- ---------- ---------- --------KG K bmy_08846T0/1-369 FTCPSEKEQR EWMESFRDVL SRPLTPLNLL TASTESGYSS R ENSBTAP00000004328/1-383 FTCPSEKEQR EWLESFREVL SSPLTPLNLL AVSTESDCSH R