KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:23:39 2014 Check: 00 .. Name: ENSTTRP00000002107/1-204 Len: 295 Check: 7938 Weight: 1.00 Name: bmy_13458T0/1-220 Len: 295 Check: 4960 Weight: 1.00 Name: ENSP00000434142/1-204 Len: 295 Check: 874 Weight: 1.00 Name: ENSBTAP00000004332/1-209 Len: 295 Check: 3286 Weight: 1.00 // 1 50 ENSTTRP00000002107/1-204 MEAQARXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLEDEI bmy_13458T0/1-220 ---------- ---------- ---------- ---------- ---------- ENSP00000434142/1-204 MEAQAQGLLE TEPLQGTDED AVASADFSSM LSEEEKEELK AELVQLEDEI ENSBTAP00000004332/1-209 MEAQARGLLE TEPLQGRDED AIASADSPSM LSEEEKEELK AELVQLEDEI 51 100 ENSTTRP00000002107/1-204 TTLRQVLSAK ERRLVEIKQK LGMNLMNELK QNFSRSWHDV QTT------T bmy_13458T0/1-220 --------MQ DQH------- ---------K KEFS-NWYPV PTSCKDHSVA ENSP00000434142/1-204 TTLRQVLSAK ERHLVEIKQK LGMNLMNELK QNFSKSWHDM QTT------T ENSBTAP00000004332/1-209 TTLRQVLSAK ERHLVEIKQK LGMNLMNELK QNFSKGWHDV QTT------T 101 150 ENSTTRP00000002107/1-204 AYKKTHETLS HAGQKATAAF SNVGTAISKK FGDM------ ---------- bmy_13458T0/1-220 DYKKTHETLS HAGQKATAAF SNVGTAISKK FGDMSVLKKS NKRGPLIFSL ENSP00000434142/1-204 AYKKTHETLS HAGQKATAAF SNVGTAISKK FGDM------ ---------- ENSBTAP00000004332/1-209 AYKKTHETLS HAGQKATAAF SNVGTAISKK FGDM------ ---------- 151 200 ENSTTRP00000002107/1-204 ---------- ---------- ---------- ---------- ---------- bmy_13458T0/1-220 GLLKEGTAGS EAASLRPDVL TLLLFFSPVL LRLQVSLHRR SLECKEEEES ENSP00000434142/1-204 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004332/1-209 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000002107/1-204 ---------- ---------X XXXXXXXXXX XXXNSPTFKS FEERVETTVT bmy_13458T0/1-220 GNCELLEEEK GRRKSSDVSN YSIRHSISMP AMRNSPTFKS FEERVETTVT ENSP00000434142/1-204 ---------- ---------S YSIRHSISMP AMRNSPTFKS FEERVETTVT ENSBTAP00000004332/1-209 ---------- ----RSHSIG YSIRHSISMP AMRNSPTFKS FEERVETTVT 251 300 ENSTTRP00000002107/1-204 SLKTKVGGTN QGGGSFEEVL SSTAQASVQS SAGGPRRAEG EELQC bmy_13458T0/1-220 SLKTKVGGTN HGGGSFEEVL SSTAQASAQS SAGGPRRAEG EELQC ENSP00000434142/1-204 SLKTKVGGTN PNGGSFEEVL SSTAHASAQS LAGGSRRTKE EELQC ENSBTAP00000004332/1-209 SLKTKVGGAN HGGGSFEEVL SSTAHASAQS SAGGPRLAEG EELQC