KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:41 2014 Check: 00 .. Name: ENSP00000353538/1-1032 Len: 1253 Check: 9499 Weight: 1.00 Name: ENSBTAP00000004335/1-1030 Len: 1253 Check: 7282 Weight: 1.00 Name: bmy_21912T0/1-1071 Len: 1253 Check: 9589 Weight: 1.00 Name: ENSTTRP00000002024/1-771 Len: 1253 Check: 2902 Weight: 1.00 Name: BACU008396/1-1198 Len: 1253 Check: 8514 Weight: 1.00 // 1 50 ENSP00000353538/1-1032 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004335/1-1030 ---------- ---------- ---------- ---------- ---------- bmy_21912T0/1-1071 WLCDTVGAGK CRLSVGGRVL GYPLGPDFRA PGRRIPAFPT HRWARVKTQL ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000353538/1-1032 MEAAAAVVAA EAEVENEDGD SSCGDVCFMD KGLQSISELS LDSTLHAVNL ENSBTAP00000004335/1-1030 --SGAMEAPG EAEVENEDGD SNCGDLCFMD KGLRSISELS LDSALHAINL bmy_21912T0/1-1071 RVAGAMEAPV EAEVENEDGE SSCGDLCFMD KGLRSISELS LDSALHAINL ENSTTRP00000002024/1-771 -----MEAPV EPEVENEDGE SRCRDLCFMD KGLRSISELS LDSALRAINL BACU008396/1-1198 -----MEAPV KAEVENEDGE SSCGDLCFMD KGLRSISELS LDSALHAINL 101 150 ENSP00000353538/1-1032 HCNNISKIEA IDHIWNLQHL DLSSNQISRI EGLNTLTKLC TLNLSCNLIT ENSBTAP00000004335/1-1030 HCNNISKITS IDHVWNLQHL DLSSNQISQI EGLNTLTKLC TLNLSCNLIT bmy_21912T0/1-1071 HCNNITKIKA IDHIWNLQHL DLSSNQISQI EGLNTLTKLR TLNLSCNLIT ENSTTRP00000002024/1-771 HCNNISKIKA IDHIWNLQHL DLSSNQISQI EGLNTLTKLR TLNLSCNLIT BACU008396/1-1198 HCNNITKIKA IDHIWNLQHL DLSSNQISQI EGLNTLTKLR TLNLSCNLIT 151 200 ENSP00000353538/1-1032 KVEGLEELIN LTRLNVSYNH IDDLSGLIPL HGIKHKLRYI DLHSNRIDSI ENSBTAP00000004335/1-1030 RIEGLEALSN LTRLNLSYNH INDLSGLMPL HGIKHKLRYI DLHSNCIDSI bmy_21912T0/1-1071 RIEGLEALTN LTRLNLSYNH INDLSGLMPL HGIKHKLRYI DLHSNCIDSI ENSTTRP00000002024/1-771 RIEGLKALTN LTRLNLSYNH INDLSGLMPL HGIKHKLRYI DLHSNCIDSI BACU008396/1-1198 RIEGLEALTN LTRLNLSYNH INDLSGLMPL HGIKHKLRYI DLHSNCIDSI 201 250 ENSP00000353538/1-1032 HHLLQCMVGL HFLTNLILEK DGDDNPVCRL PGYRAVILQT LPQLRILDCK ENSBTAP00000004335/1-1030 HHLLQCTVGL HFLTNLILEK NGEDNPVCHL PGYRAVMLQT LPQLRILDCK bmy_21912T0/1-1071 HHLLQCTVGL HFLTNLILEK NGEDNPVCHL PGYRAVMLQT LTQLRILDCK ENSTTRP00000002024/1-771 HHLLQCTVGL RFLTNLILEK NGEDNPVCHL PGYRAVMLQT LPQLRILDCK BACU008396/1-1198 HHLLQCTVGL HFLTNLILEK NGEDNPVCHL PGYRAVMLQT LPQLRILDCK 251 300 ENSP00000353538/1-1032 NIFGEPVNLT EINSSQLQCL EGLLDNLVSS DSPLNISEDE IIDRMPVITA ENSBTAP00000004335/1-1030 NIFGEPINMA EINSSHLQCF EGLLDNLVSS ESPLNISEDE ITDGMPV-AP bmy_21912T0/1-1071 NIFGEPVNMA EINSSRLQCF EGLLDNLVSS DSPLNISEDE IIDGMPVVTP ENSTTRP00000002024/1-771 NIFGEPVNMA EINSSHLQCF EGLSDNLVSS DSPLNISENE ISDGMPVVTP BACU008396/1-1198 NIFGEPVNMA EINSSRLQCF EGLLDNLVSS DSPLNISEDE IIDSMPVVTP 301 350 ENSP00000353538/1-1032 PIDELVPLEQ FASTPSDAVL TSFMSVCQSS EPEKNNHEND LQNEIKLQKL ENSBTAP00000004335/1-1030 PVGDTVPLDQ FPSTPTDTGL TSLMSVCPSS EPEKVNHEND LQNEMKLQKL bmy_21912T0/1-1071 PIDEVAPLDH FASTPADTGL TSFISVCPSS EPEKVKNESD FQNEMKLQKL ENSTTRP00000002024/1-771 PIDEVAPLDH FVSTPADTGL TSFISVCP-S EPEKVNNEND FQNEMKLQKL BACU008396/1-1198 PIDEVAPLDH FASTPADTGL ASFISVCPSS EPEKVNNESD FQNEMKLQKL 351 400 ENSP00000353538/1-1032 DDQILQLLNE TSNS-IDNVL EKDPRPKRDT DITSESDYGN RKECNRKVPR ENSBTAP00000004335/1-1030 DDQILQLLSE TSNSIIDNVP EKDPRPKRDT DVTSESDYGN RKECSKKTSR bmy_21912T0/1-1071 DDQILQLLNE TSNSLIDNVP EKDLRPKRDT DVTSESDCGN RKECNRKIPR ENSTTRP00000002024/1-771 DDQILQLLSE TSNSLIDNVP EKDLRPRRDT DVTSESDCGN RKECNRKIPR BACU008396/1-1198 DDQILQLLNE TSNSLIDNVP EKDLRPKRDT DVTSESDCGN RKECNRKIPR 401 450 ENSP00000353538/1-1032 RSKIPYDAKT IQTIKHHNKN YNSFVSCNRK MKPPYLKELY VSSSLANCPM ENSBTAP00000004335/1-1030 RSKIPYYSKT IQTIKHHSKN SSTFISCNRK MKPPFLKELY ISSSLPNNST bmy_21912T0/1-1071 RSKIPYYSKT IQTIKHHSKN NNAFISCNRK MKQPFFKELH VRSSLVNNNV ENSTTRP00000002024/1-771 RSKIPYYSKT IQTVKRHSKN NNAFISCNRK MKPPFFKELH IRSSLVNNNI BACU008396/1-1198 RSKIPYYSKT IQTIKHHSKN NSAFISCNRK MKQPFFKELH VRSSLVNNNI 451 500 ENSP00000353538/1-1032 LQESEKPKTE IIKVDQSHSE DNTYQSLVEQ LDQEREKRWR AEQAENKLMD ENSBTAP00000004335/1-1030 LEESENQKTE IMKVNNDCPE DATYRALVEE LDEEREKRWK AEQTEKKLMD bmy_21912T0/1-1071 LEESEKQKTE IIKVNSGSSE NATYR----- -------RWK AEQTEKKLMD ENSTTRP00000002024/1-771 LEESEKQKTE IIKVNNGSSE NATYRALVEE LDQEREKRWK AEQTEKKLMD BACU008396/1-1198 LEESEKQKTE IIKVNNGSSE NATYRALVEE LDQEREKRWK AEQTEKKLMD 501 550 ENSP00000353538/1-1032 YIDELHKHAN EKEDIHSLAL LTTDRLKEII FRERNSKGQL EVMVHKLQNE ENSBTAP00000004335/1-1030 YIDELHKHAD EKKDIRSQAL LTTDRLKEII FKERNSKLQL EIMVHRLQNE bmy_21912T0/1-1071 YIDELHKHAN EKKGIHSLAL LTTDRLKEII FKERNSKLQL EIMVHRLQNE ENSTTRP00000002024/1-771 YIDELHKHAN EKKDIHSLAL LTTDRLKEII FKERNSKLQL EIMVHRLQNE BACU008396/1-1198 YIDELHKHAN EKKDIHSLAL LTTDRLKEII FKERNSKLQL EIMVHRLQNE 551 600 ENSP00000353538/1-1032 IKKLTVELMK AKDQQEDHLK HLRTLEKTLE KMERQKRQQQ AAQIRLIQEV ENSBTAP00000004335/1-1030 IKKLTIELIK ARDQQDDHIR HLRTLEKALE KMERQKGQQQ AAQMRLIQEV bmy_21912T0/1-1071 IKKLTIELIK ARDQQEDHIR HLRTLEKALE KKERQKGQQQ AAQMQLIQEV ENSTTRP00000002024/1-771 IKKLTVELIK ARDQQEDHVR HLRTLEKALE KKERQKRQQQ AAQMRLIQEV BACU008396/1-1198 IKKLTIELIK ARDQQEDHVR HLRTLEKALE KKERQKGQQQ AAQMQLIQEV 601 650 ENSP00000353538/1-1032 ELKASAADRE IYLLRTSLHR EREQAQQLHQ LLALKEQEHR KELETREFFT ENSBTAP00000004335/1-1030 ELKAAAADRE INLLRTSLHQ EKEQGAQLHE LLALKEKEHR KDIETREFFS bmy_21912T0/1-1071 ELKAAAADRE INLLKTSLHQ EKEQVQQLHE LLALKEQEHR KDLETREFFS ENSTTRP00000002024/1-771 ELKAIAADRE INLLRTSLHQ EKEHVQQLHE LLALKEQEHR KDLETREFFS BACU008396/1-1198 ELKAAAADRE INLLRTSLHQ EKEQVQQLHE LLALKEQEHR KDLETREFFS 651 700 ENSP00000353538/1-1032 DADFQDALAK EIAKEEKKHE QMIKEYQEKI DVLSQQYMDL ENEFRIALTV ENSBTAP00000004335/1-1030 EAEFQEALAK EIAKEERKHE QVIKEYQDKI DALNQQYMDL ENEFRIALTV bmy_21912T0/1-1071 EAEFQEALAK EIAKEERKHE QVIKEYQDKI DALNQQYMDL ENEFRIALTV ENSTTRP00000002024/1-771 EAEFQEALAK EVAKEERKHE QVIKEYQDKI DALNQQYMDL ENEFRIALTV BACU008396/1-1198 EAEFQEALAK EIAKEERKHE QVIKEYQDKI DALNQQYMDL ENEFRIALTV 701 750 ENSP00000353538/1-1032 EARRFQDVKD GFENVATELA KSKHALIWAQ RKENESSSLI KDLTCMVKEQ ENSBTAP00000004335/1-1030 EARRFKDVKD GFENVATELA KSKHALVWAQ RKENESSSLI KDLTCMVKEQ bmy_21912T0/1-1071 EARRFKDVKD GFENVATELA KSKHALVWAQ RKENESSSLI KDLTSMVKEQ ENSTTRP00000002024/1-771 EARRFKDVKD GFENVATELA KSKNALVWAQ RKENESSSLI KDLTSMVKEQ BACU008396/1-1198 EARRFKDVKD GFENVATELA KSKHALVWAQ RKENESSSLI KDLTSMVKEQ 751 800 ENSP00000353538/1-1032 KTKLAEVSKL KQETAANLQN QINTLEILIE DDKQKSIQIE LLKHEKVQLI ENSBTAP00000004335/1-1030 KTKLAEVSKL KQETAANLQN QINTLEILIE DDKQKSIQIE LLKQEKMQLI bmy_21912T0/1-1071 KTKLAEVSKL KQETATNLQN QINTLEILIE DDKQKSIQIE LLKHEKMQLI ENSTTRP00000002024/1-771 KTKLAEVSKL KQETATNLQN QINTLEILSE DDKQKSIQIE LLKHEKMQLI BACU008396/1-1198 KTKLAEVSKL KQETATNLQN QINTLEILIE DDKQKSIQIE LLKHEKMQLI 801 850 ENSP00000353538/1-1032 SELAAKESLI FGLRTERKVW GHELAQQGSS LAQNRGKLEA QIESLSRENE ENSBTAP00000004335/1-1030 SELAAKESLI YGLRTERKVW GHELALQGSS LVQNHGRVEA QLESLYRENE bmy_21912T0/1-1071 SELAAKESLI YGLRTERKVW GHELAQQGSS LAQNHGRLEA QIESLCRENE ENSTTRP00000002024/1-771 SELAAKESLI YGLRTERKVW GHELAQQ--- ---------- ---------- BACU008396/1-1198 SELAAKESLI YGLRTERKVW GHELAQQGSS LAQNHGRLEA QIESLCRENE 851 900 ENSP00000353538/1-1032 CLRKTNESDS DALRIKCKII DDQTETIRKL KDCLQEKDEH IKRLQEKITE ENSBTAP00000004335/1-1030 CLRKASERDS DTIRIKCKII DDQTETIGKL KECLQEREEQ IKILHEKITE bmy_21912T0/1-1071 SLRKASERDN DTLRIKCKIV EDQTETIGKL KECLQEREEQ IKILHEKITE ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 SLRKASERDN DTLRIKCKII EDQTETIGKL KECLQEREEQ IKILHKKITE 901 950 ENSP00000353538/1-1032 IEKCTQEQLD EKSSQLDEVL EKLERHNERK EKLKQQLKGK EVELEEIRKA ENSBTAP00000004335/1-1030 IQKCTQEQLE EKSSQLDEIV EKLERHNERK EKLKQQLKVK ELELDEIRKA bmy_21912T0/1-1071 IQKCTQEQLD EKSSQLDEII EKLERHNERK EKLKQQLKVK ELELEEIRKA ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 IQKCTQEQLD EKSSQLDEII EKLERHDERK EKLKQQLKVK ELELEEIRKA 951 1000 ENSP00000353538/1-1032 YSTLNRKWHD KGELLCHLET QVKEVKEKFE NKEKKLKAER DKSIELQKNA ENSBTAP00000004335/1-1030 YSTLNQKWHD KGELLCHLEM QVKEVKENFE NKERKLKAER DKSIELQKDA bmy_21912T0/1-1071 YSTLNQKWHD KGELLCHLEM QVKEVKENFE NKERKLKAER DKSIELQKDA ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 YSTLNQKWHD KGELLCHLEM QVKEVKENFE NKERKLKAER DKSIELQKDA 1001 1050 ENSP00000353538/1-1032 MEKLHSMDDA FKRQVDAIVE AHQAEIAQLA NEKQKCIDSA NLKV-----H ENSBTAP00000004335/1-1030 MEKLQSMDDA FKKQVDAIVE AHQNEIIQLA NEKQKCIDSA NLKV-----H bmy_21912T0/1-1071 IEKLHSMDDA FKKQVDAIVE AHQAEIIQLA SEKQKCIDSA NLKV-----H ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 IEKLHSMDDA FKKQVDAIVE AHQAEIIQLA SEKQKCIDSA NLKAAAATQA 1051 1100 ENSP00000353538/1-1032 QIEKEMRELL EETCKNKKTM EAKIKQLAFA LNE------- ---------- ENSBTAP00000004335/1-1030 RVEEEMRGLL EETCKNKKAM ETKIKQLAFA LSQ------- ---------- bmy_21912T0/1-1071 RVEEEMRGLL EETCKNKKAM EIKIKQLAFA LNQ------- ---------- ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 DVGRQLLSLV SGSRRPARQP QQRPRTFSYV THEDICNCFN GDTLLAIQAP 1101 1150 ENSP00000353538/1-1032 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004335/1-1030 ---------- ---------- ---------- ---------- ---------- bmy_21912T0/1-1071 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 SGTQLEVPIP EMGQNGQKKY QINLKSHSGP IHVLLINKES SSSKPVVFPV 1151 1200 ENSP00000353538/1-1032 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004335/1-1030 ---------- ---------- ---------- ---------- ---------- bmy_21912T0/1-1071 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 PPPDDLTQPS SQPSTPVPPQ KSSMATQNLP EQHVSERSQN LQQTPATELS 1201 1250 ENSP00000353538/1-1032 --------IQ QDM------- ---------- ---------- ---------- ENSBTAP00000004335/1-1030 --------IQ QEI------- ---------- ---------- ---------- bmy_21912T0/1-1071 --------IQ QEM------- ---------- ---------- ---------- ENSTTRP00000002024/1-771 ---------- ---------- ---------- ---------- ---------- BACU008396/1-1198 SAGSISGDII DELMSSDVFP LLRLSPTPAD DYNFNLDDNE GVCDLFDVQI 1251 1300 ENSP00000353538/1-1032 --- ENSBTAP00000004335/1-1030 --- bmy_21912T0/1-1071 --- ENSTTRP00000002024/1-771 --- BACU008396/1-1198 LNY