KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:42 2014 Check: 00 .. Name: bmy_11086T0/1-282 Len: 334 Check: 2202 Weight: 1.00 Name: BACU019125/1-330 Len: 334 Check: 7925 Weight: 1.00 Name: ENSTTRP00000005837/1-331 Len: 334 Check: 9439 Weight: 1.00 Name: ENSP00000357880/1-334 Len: 334 Check: 389 Weight: 1.00 Name: ENSBTAP00000004338/1-334 Len: 334 Check: 291 Weight: 1.00 // 1 50 bmy_11086T0/1-282 MEAAHFFEGT EKLLEVRFSR QQPDSNQGSG DLRTIPRYKW DILLKDVQCS BACU019125/1-330 MEVAHFFEET EKVLEVWFSR QQPDANQVSG DLHTIPRSEW DILLKDVQCS ENSTTRP00000005837/1-331 MEAAHFFEGT EKLLEVWFSR QQPDANQGSG DLRTIPRSEW DILLKDVLCS ENSP00000357880/1-334 MEAAHFFEGT EKLLEVWFSR QQPDANQGSG DLRTIPRSEW DILLKDVQCS ENSBTAP00000004338/1-334 MEAAHFFEGT EKLLEVWFSR QQPDANQGSG DLRTIPRSEW DILLKDVQCS 51 100 bmy_11086T0/1-282 VISVTKTDKQ EAY------- ---------- ---------- ---------- BACU019125/1-330 IISVTKTDKQ EAYVLSESSM FVSKRRFILK T-WYSLLLKA LVPLLKLARD ENSTTRP00000005837/1-331 IISVTKTDKQ EAYVL--SSM FVSKRRFILK TCGTTLLLKA LVPLLKLARN ENSP00000357880/1-334 IISVTKTDKQ EAYVLSESSM FVSKRRFILK TCGTTLLLKA LVPLLKLARD ENSBTAP00000004338/1-334 IISVTKTDKQ EAYVLSESSM FVSKRRFILK TCGTTLLLKA LVPLLKLARD 101 150 bmy_11086T0/1-282 ---------- -----NFMKP SHQGYPHGNF REEIEFLNAI FPNGAAYCMG BACU019125/1-330 YSGSD--QSF FYSCKNFMKS SHQGYPHRNF QEEIEFLNAI FPNGAAYCMG ENSTTRP00000005837/1-331 YSGFDSIQSF FYSRKNFMKP SHQGYPHRNF QEEIEFLNAI FPNGATYCMG ENSP00000357880/1-334 YSGFDSIQSF FYSRKNFMKP SHQGYPHRNF QEEIEFLNAI FPNGAAYCMG ENSBTAP00000004338/1-334 YSGFDSIQSF FYSRKNFMKP SHQGYPHRNF QEEIEFLNAI FPNGAAYCMG 151 200 bmy_11086T0/1-282 RMNSDCWYLY TLDFPESRVI NQPDQTLEIL MSELDPAVMD QCYMKDGITA BACU019125/1-330 GMNSDCWYLY TLDFPGSRVI NQPDQTLEIL MSELDPAVMD QFYMKDGVTA ENSTTRP00000005837/1-331 RMNSDCWCFC TLDFPESRVI NQPDQTLEIL LSELDPAVTD QFYMKDGVTA ENSP00000357880/1-334 RMNSDCWYLY TLDFPESRVI SQPDQTLEIL MSELDPAVMD QFYMKDGVTA ENSBTAP00000004338/1-334 RMNSDCWYLY TLDFPESRVI NQPDQTLEIL MSELDPAVMD QFYMKDGVTA 201 250 bmy_11086T0/1-282 KDVTHESRIR DLIPGSVIDA TLFDPCGYSM NGMKSDGTYW TTHITPEPEF BACU019125/1-330 KDVTRESGIC DLIPGSVIDP TLFNPCGYSM NGMKSDGTYW TIHITPEPQF ENSTTRP00000005837/1-331 KDVTRESGIR DLIPGSVIDA TLFNPCGYSM NGMKLDGTYW TIHIT-EPEF ENSP00000357880/1-334 KDVTRESGIR DLIPGSVIDA TMFNPCGYSM NGMKSDGTYW TIHITPEPEF ENSBTAP00000004338/1-334 KDVTRESGIR DLIPGSVIDA TMFNPCGYSM NGMKSDGTYW TIHITPEPEF 251 300 bmy_11086T0/1-282 SYVSFETNLS QTSYDDLIRK VVEVFKPGKF VTTLFANQSS KCRTVLSSPQ BACU019125/1-330 SYVSFETNLS QTSYDDLIRK VVEVFKPGK- VTTLFVNQSS KCHTVLSSHQ ENSTTRP00000005837/1-331 SYVSFETNLS QTSYDDQIRK VVEVFKPGKF VTTLFVNQSS KCLTVLSPPQ ENSP00000357880/1-334 SYVSFETNLS QTSYDDLIRK VVEVFKPGKF VTTLFVNQSS KCRTVLASPQ ENSBTAP00000004338/1-334 SYVSFETNLS QTSYDDLIRK VVEVFKPGKF VTTLFVNQSS KCRTVLSSPQ 301 350 bmy_11086T0/1-282 KTESFKGLDC QSALFSDYNF VFTSFAKKRQ QQQS BACU019125/1-330 KIEGFKRLDC QSAMFNDYNF VFTSFAKQQQ QQQS ENSTTRP00000005837/1-331 SIEGFKRLDC QSAMFSDYNF VFTSFAEKQQ QQQS ENSP00000357880/1-334 KIEGFKRLDC QSAMFNDYNF VFTSFAKKQQ QQQS ENSBTAP00000004338/1-334 KIEGFKRLDC QSALFNDYNF VFTSFAKKQQ QQQS