KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:43 2014 Check: 00 .. Name: ENSTTRP00000012087/1-819 Len: 848 Check: 1345 Weight: 1.00 Name: BACU016005/1-848 Len: 848 Check: 407 Weight: 1.00 Name: bmy_07356T0/1-774 Len: 848 Check: 457 Weight: 1.00 Name: ENSP00000265272/1-810 Len: 848 Check: 9762 Weight: 1.00 Name: ENSBTAP00000004348/1-820 Len: 848 Check: 1386 Weight: 1.00 // 1 50 ENSTTRP00000012087/1-819 MSKKGRNKGE KPEALIVALQ AANEDLRTKL TDIQIELHQE KSKVSKLERE BACU016005/1-848 MSKKGRNKGE KPEALIVALQ AANEDLRTKL TDIQIELHQE KSKVSKLERE bmy_07356T0/1-774 MSKKGRNKGE KPEALIVALQ AANEDLRTKL TDIQIELHQE KSKVSKLERE ENSP00000265272/1-810 MSKKGRNKGE KPEALIVALQ AANEDLRTKL TDIQIELHQE KSKVSKLERE ENSBTAP00000004348/1-820 MSKKGRNKGE KPEALIVALQ AANEDLRTKL TDIQIELHQE KSKVSKLERE 51 100 ENSTTRP00000012087/1-819 KTQEAKRIRE LEQRKHTVLV TELKTKLHEE KMKELQAVRE NLIKQHEQEM BACU016005/1-848 KTQEAKRIRE LEQRKHTVLV TELKTKLHEE KMKELQAVRE NLIKQHEQEM bmy_07356T0/1-774 KTQEAKRIRE LEQRKHTVLV TELKTKLHEE KMKELQAVRE NLIKQHEQEM ENSP00000265272/1-810 KTQEAKRIRE LEQRKHTVLV TELKAKLHEE KMKELQAVRE NLIKQHEQEM ENSBTAP00000004348/1-820 KTQEAKRIRE LEQRKHTVLV TELKAKLHEE KMKELQAVRE NLIKQHEQEM 101 150 ENSTTRP00000012087/1-819 ARTVKVRDGE IQRLKSALCA LRDGSSDKVR TALTIEAREE ARKLFDAERL BACU016005/1-848 ARTVKVRDGE IQRLKSALCA LRDGSSDKVR TVLTIEAREE ARKLFDAERL bmy_07356T0/1-774 ARTVKVRDGE IQRLKSALCA LRDGSSDKVR TALTIEAREE ARKLFDAERL ENSP00000265272/1-810 SRTVKVRDGE IQRLKSALCA LRDGSSDKVR TALTIEAREE ARKLFDTERL ENSBTAP00000004348/1-820 ARTVKVRDGE IQRLKSALCA LRDGSSDKVR TALTIEAREE ARKLFDAERL 151 200 ENSTTRP00000012087/1-819 KLLQEIADLK TAKKQVDEAL SNMIQADKIK AGDLRSEHQS HQEAISKIKW BACU016005/1-848 KLLQEIADLK TAKKQVDEAL SNMIQADKIK AGDLRSEHQS HQEAISKIKW bmy_07356T0/1-774 KLLQEIADLK TAKKQVDEAL SNMIQADKIK AGDLRSEHQS HQEAISKIKW ENSP00000265272/1-810 KLLQEIADLK TAKKQVDEAL SNMIQADKIK AGDLRSEHQS HQEAISKIKW ENSBTAP00000004348/1-820 KLLQEIADLK TAKKQVDEAL SNMIQADKIK AGDLRSEHQS HQEAISKIKW 201 250 ENSTTRP00000012087/1-819 ESERDIRRLM DEIKAKDRII FSLEKELETQ TGYVQKLQLQ KEALDEQLFL BACU016005/1-848 ESERDIRRLM DEIKAKDRII FSLEKELETQ TGYVQKLQLQ KEALDEQLFL bmy_07356T0/1-774 ESERDIRRLM DEIKAKDRII FSLEKELETQ TGYVQKLQLQ KEALDEQLFL ENSP00000265272/1-810 ESERDIRRLM DEIKAKDRII FSLEKELETQ TGYVQKLQLQ KEALDEQLFL ENSBTAP00000004348/1-820 ESERDIRRLM DEIKAKDRII FSLEKELETQ TGYVQKLQLQ KEALDEQLFL 251 300 ENSTTRP00000012087/1-819 VKEAECNMSS PKREIPGRAG DGSEHCSSPD LRRNQKRIAE LNATIRKLED BACU016005/1-848 VKEAECNMSS PKREIPGRAG DGSEHCSSPD LRRNQKRIAE LNATIRKLED bmy_07356T0/1-774 VKEAECNMSS PKREIPGRAG DGSEHCSSPD LRRNQKRIAE LNATIRKLED ENSP00000265272/1-810 VKEAECNMSS PKREIPGRAG DGSEHCSSPD LRRNQKRIAE LNATIRKLED ENSBTAP00000004348/1-820 VKEAECNMSS PKREIPGRAG DGSEHCSSPD LRRNQKRIAE LNATIRKLED 301 350 ENSTTRP00000012087/1-819 RNTLLGDERN ELLKRVRETE KQCKPLLERN KCLAKRNDEL VVSLQRMEEK BACU016005/1-848 RNTLLGDERN ELLKRVREAE KQCKPLLERN KCLAKRNDEL MVSLQRMEEK bmy_07356T0/1-774 RNTLLGDERN ELLKRVRETE KQCKPLLERN KCLAKRNDEL MVSLQRMEEK ENSP00000265272/1-810 RNTLLGDERN ELLKRVRETE KQCKPLLERN KCLAKRNDEL MVSLQRMEEK ENSBTAP00000004348/1-820 RNTLLGDERN ELLKRVRETE KQCKPLLERN KCLAKRNDEL MVSLQRMEEK 351 400 ENSTTRP00000012087/1-819 LKAVTKENSE MREKITSHPP LKKLKSLNDL DQANEEQETE FLKLQVIEQQ BACU016005/1-848 LKAVTKENSE MREKITSHPP LKKLKSLNDL DQANEEQETE FLKLQVIEQQ bmy_07356T0/1-774 LKAVTKENSE MREKITSHPP LKKLKSLNDL DQANEEQETE FLKLQVIEQQ ENSP00000265272/1-810 LKAVTKENSE MREKITSHPP LKKLKSLNDL DQANEEQETE FLKLQVIEQQ ENSBTAP00000004348/1-820 LKAVTKENSE MREKITSHPP LKKLKSLNDL DQANEEQETE FLKLQVIEQQ 401 450 ENSTTRP00000012087/1-819 NIIDELTRDR EKLIRRRKHR RSSKPIKRPV LDPFIGYDED SMDSETSSMA BACU016005/1-848 NIIDELTRDR EKLIRRRKHR RSSKPIKRPV LDPFIGYDED SMDSETSSMA bmy_07356T0/1-774 NIIDELTRDR EKLIRRRKHR RSSKPIKRPV LDPFIGYDED SMDSETSSMA ENSP00000265272/1-810 NIIDELTRDR EKLIRRRKHR RSSKPIKRPV LDPFIGYDED SMDSETSSMA ENSBTAP00000004348/1-820 NIIDELTRDR EKLIRRRKHR RSSKPIKRPV LDPFIGYDED SMDSETSSMA 451 500 ENSTTRP00000012087/1-819 SFRTDRTPAT PDDDLDESLA AEESELRFRQ LTKEYQALQR AYALLQEQTG BACU016005/1-848 SFRTDRTPAT PDDDLDESLA AEESELRFRQ LTKEYQALQR AYALLQEQTG bmy_07356T0/1-774 SFRTDRTPAT PDDDLDESLA AEESELRFRQ LTKEYQALQR AYALLQEQTG ENSP00000265272/1-810 SFRTDRTPAT PDDDLDESLA AEESELRFRQ LTKEYQALQR AYALLQEQTG ENSBTAP00000004348/1-820 SFRTDRTPAT PDDDLDESLA AEESELRFRQ LTKEYQALQR AYALLQEQTG 501 550 ENSTTRP00000012087/1-819 GIIDAEREAK XXXXXXXXXX XXXXXXXXXX XXXXXXXXDS HWVEDKQLFI BACU016005/1-848 GIIDAEREAK AQEQLQAEVL RYKAKIEDLE ATLAQKGQDS HWVEEKQLFI bmy_07356T0/1-774 GIIDAEREAK AQEQLQAEVL RYKAKIEDLE ATLAQKGQDS HWVEDKQLFI ENSP00000265272/1-810 GIIDAEREAK AQEQLQAEVL RYKAKIEDLE ATLAQKGQDS HWVEDKQLFI ENSBTAP00000004348/1-820 GIIDAEREAK AQEQLQAEVL RYKAKIEDLE ATLAQKGQDS HWVEDKQLFI 551 600 ENSTTRP00000012087/1-819 KRNQELLEKI EKQEAENHRL QQELQDARDQ NELLEFRNLE LEERERRSPP BACU016005/1-848 KRNQELLEKI EKQEAENHRL QQELQDARDQ NELLEFRNLE LEERERRSPP bmy_07356T0/1-774 KRNQELLE-- ---------- ---------- ---------- ---------- ENSP00000265272/1-810 KRNQELLEKI EKQEAENHRL QQELQDARDQ NELLEFRNLE LEERERRSPP ENSBTAP00000004348/1-820 KRNQELLEKI EKQEAENHRL QQELQDARDQ NELLEFRNLE LEERERRSPP 601 650 ENSTTRP00000012087/1-819 FNLQIHPFSD GVSALQIYCX XXXXXDVNI- DLIKQLDILG DNGNLRNEEQ BACU016005/1-848 FNLQIHPFSD GVSALQIYCM KEGVKDVNIP DLIKQLDILG DNGNLRNEEQ bmy_07356T0/1-774 ---------- ---------- ----KDVNIP DLIKQLDILG DNGNLRNEEQ ENSP00000265272/1-810 FNLQIHPFSD GVSALQIYCM KEGVKDVNIP DLIKQLDILG DNGNLRNEEQ ENSBTAP00000004348/1-820 FNLQIHPFSD GVSALQIYCM KEGVKDVNIP DLIKQLDILG DNGNLRNEEQ 651 700 ENSTTRP00000012087/1-819 VAIIQASTVL SLAEKWIQQI EGAEAALHQK MMELESDMEQ FCKIKGYLEE BACU016005/1-848 VAIIQASTVL SLAEKWIQQI EGAEAALHQK MMELESDMEQ FCKIKGYLEE bmy_07356T0/1-774 VAIIQASTVL SLAEKWIQQI EGAEAALHQK MMELESDMEQ FCKIKGYLEE ENSP00000265272/1-810 VAIIQASTVL SLAEKWIQQI EGAEAALHQK MMELESDMEQ FCKIKGYLEE ENSBTAP00000004348/1-820 VAIIQASTVL SLAEKWIQQI EGAEAALHQK MMELESDMEQ FCKIKGYLEE 701 750 ENSTTRP00000012087/1-819 ELDYRKQALD QAYMRIQELE ATLYNALQQE TVIKFGELLT EKQQEELRTA BACU016005/1-848 ELDYRKQALD QAYMRIQELE ATLYNALQQE TVIKFGELLT EKQQEELRTA bmy_07356T0/1-774 ELDYRKQALD QAYMRIQELE ATLYNALQQE TVIKFGELLT EKQQEELRTA ENSP00000265272/1-810 ELDYRKQALD QAYMRIQELE ATLYNALQQE TVIKFGELLS EKQQEELRTA ENSBTAP00000004348/1-820 ELDYRKQALD QAYMRIQELE ATLYNALQQE TVIKFGELLS EKQQEELRTA 751 800 ENSTTRP00000012087/1-819 VEKLRRQMLR KSREYDCQIL QERMELLQQA HQRIRDLEDK TDIQKRQIKD BACU016005/1-848 VEKLRRQMLR KSREYDCQIL QERMELLQQA HQRIRDLEDK TDIQKRQIKD bmy_07356T0/1-774 VEKLRRQMLR KSREYDCQIL QERMELLQQA HQRIRDLEDK TDIQKRQIKD ENSP00000265272/1-810 VEKLRRQMLR KSREYDCQIL QERMELLQQA HQRIRDLEDK TDIQKRQIKD ENSBTAP00000004348/1-820 VEKLRRQMLR KSREYDCQIL QERMELLQQA HQRIRDLEDK TDIQKRQIKD 801 850 ENSTTRP00000012087/1-819 LEEKFLFL-- --FLFF---S LAFILWP--- ---------- -------- BACU016005/1-848 LEEKLLCICV GSFCFYSCSS LLPLFYGLDV KVPLTAKAFD LTVLFYIS bmy_07356T0/1-774 LEEKVHVK-- --FNMY---F NLYFLDQTII LFSLTVFSF- FSAIVYLA ENSP00000265272/1-810 LEEKSNRK-- --HG------ ---------- ---------- -------- ENSBTAP00000004348/1-820 LEEKFLFL-- --FLFF---S LAFILWP--- ---------- --------