KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:43 2014 Check: 00 .. Name: ENSP00000219833/1-628 Len: 688 Check: 3242 Weight: 1.00 Name: ENSBTAP00000004354/1-615 Len: 688 Check: 594 Weight: 1.00 Name: ENSTTRP00000001112/1-629 Len: 688 Check: 2663 Weight: 1.00 Name: BACU001856/1-688 Len: 688 Check: 8093 Weight: 1.00 Name: bmy_02335T0/1-601 Len: 688 Check: 3921 Weight: 1.00 // 1 50 ENSP00000219833/1-628 MLLARMNPQV QPENNGADTG PEQPLRARKT AELLVVKERN GVQCLLAPRD ENSBTAP00000004354/1-615 MLLARMNPQV QPENGGAGPG SEQPPRKRK- -EVLVVKERN GVQCLLASRD ENSTTRP00000001112/1-629 MLLARMNPQV QPENSGAGPG SEQPQRKRKA ADLLVVKERN GVQCLLASRD BACU001856/1-688 MLLARMNPQV QPENSGAGPG SEQPQRKRKA AELLVVKERN GVQCLLASRD bmy_02335T0/1-601 MLLARMNPQV QPENSGAGPG SEQPQRKRKA AELLVVKERN GVQCLLASRD 51 100 ENSP00000219833/1-628 GDAQPRETWG KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL ENSBTAP00000004354/1-615 GDEQPRETWG KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL ENSTTRP00000001112/1-629 GDVQPRETWG KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL BACU001856/1-688 GDEQPRETWG KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL bmy_02335T0/1-601 GDEQPRETWG KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL 101 150 ENSP00000219833/1-628 FLIIAGMPLF YMELALGQYN REGAATVWKI CPFFKGVGYA VILIALYVGF ENSBTAP00000004354/1-615 FLIIAGMPLF YMELALGQYN REGAATVWKI CPFFKGVGYA VILIALYVGF ENSTTRP00000001112/1-629 FLIIAGMPLF YMELALGQYN REGAATVWKI CPFFKGVGYA VILIALYVGF BACU001856/1-688 FLVIAGMPLF YMELALGQYN REGAATVWKI CPFFKGVGYA VILIALYVGF bmy_02335T0/1-601 FLIIAGMPLF YMELALGQYN REGAATVWKI CPFFKGVGYA VILIALYVGF 151 200 ENSP00000219833/1-628 YYNVIIAWSL YYLFSSFTLN LPWTDCGHTW NSPNCTDPKL LNGSVLGNHT ENSBTAP00000004354/1-615 YYNVIIAWSL YYLFSSFTPT LPWTDCGHAW NSPNCTDPKL LNSSVLGNHT ENSTTRP00000001112/1-629 YYNVIIAWSL YYLFSSFTLN LPWTDCGHAW NSPNCTDPKL LNSSVLGNHT BACU001856/1-688 YYNVIIAWSL YYLFSSFTLH LPWTDCGHAW NSPNCTDPKL LNSSVLGNHT bmy_02335T0/1-601 YYNVIIAWSL YYLFSSFTLN LPWTDCGHAW NSPNCTDPKL LNSSVLGNHT 201 250 ENSP00000219833/1-628 KYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC LMVVVIVLYF ENSBTAP00000004354/1-615 KYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC LIIVVIVLFF ENSTTRP00000001112/1-629 TYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC LIVVVIVLFF BACU001856/1-688 TYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC LIVVVIVLFF bmy_02335T0/1-601 TYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC LIVVVIVLFF 251 300 ENSP00000219833/1-628 SLWKGVKTSG KVVWITATLP YFVLFVLLVH GVTLPGASNG INAYLHIDFY ENSBTAP00000004354/1-615 SLWKGVKTSG KVVWITATLP YLVLFVLLVH GITLPGASNG INAYLHIDFY ENSTTRP00000001112/1-629 SLWKGVKTSG KVVWITATLP YLVLFVLLVH GITLPGASNG INAYLHIDFY BACU001856/1-688 SLWKGVKTSG KVVWITATLP YLVLFVLLVH GITLPGASNG INAYLHIDFY bmy_02335T0/1-601 SLWKGVKTSG KVVWITATLP YLVLFVLLVH GITLPGASNG INAYLHIDFY 301 350 ENSP00000219833/1-628 RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSSIN ENSBTAP00000004354/1-615 RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSTIN ENSTTRP00000001112/1-629 RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSTIN BACU001856/1-688 RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSTIN bmy_02335T0/1-601 RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSTIN 351 400 ENSP00000219833/1-628 CITSFVSGFA IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG ENSBTAP00000004354/1-615 CVTSFISGFA IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG ENSTTRP00000001112/1-629 CVTSFISGFA IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG BACU001856/1-688 CVTSFISGFA IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG bmy_02335T0/1-601 CVTSFISGFA IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG 401 450 ENSP00000219833/1-628 STFWAVVFFV MLLALGLDSS MGGMEAVITG LADDFQVLKR HRKLFTFGVT ENSBTAP00000004354/1-615 STFWAIVFFI MLLALGIDSS MGGMEAVITG LADDFQVLKR HRKLFTFAVS ENSTTRP00000001112/1-629 STFWAVVFFV MLLALGIDSS MGGMEAVITG LADDFQVLKR HRKLFTFGVS BACU001856/1-688 STFWAVVFFV MLLALGIDSS MGGMEAVITG LADDFQVLKR HRKLLTFGVS bmy_02335T0/1-601 STFWAVVFFV MLLALGIDSS ---------- ------VLKR HRKLFTFGVS 451 500 ENSP00000219833/1-628 FSTFLLALFC ITKGGIYVLT LLDTFAAGTS ILFAVLMEAI GVSWFYGVDR ENSBTAP00000004354/1-615 FGTFLLALFC ITKGGIYVLT LLDTFAAGTS ILFAVLMEAI GVSWFYGVDR ENSTTRP00000001112/1-629 FGTFLLALFC ITKGGIYVLT LLDTFAAGTS ILFAVLMEAI GVSWFYGVDR BACU001856/1-688 FGTFLLALFC ITKGGIYVLT LLDTFAAGTS ILFAVLMEAI GVSWFYGVDR bmy_02335T0/1-601 FGTFLLALFC ITKGGIYVLT LLDTFAAGTS ILFAVLMEAI GVSWFYGVDR 501 550 ENSP00000219833/1-628 FSNDIQQMMG FRPGLYWRLC WKFVSPAFLL FVVVVSIINF KPLTYDDYIF ENSBTAP00000004354/1-615 FSNDIQQMMG FKPGLYWRLC WKFVSPAFLL FVVIVSIINF KPLTYDDYIF ENSTTRP00000001112/1-629 FSNDIQQMMG FKPGLYWRLC WKFVSPAFLL FVVVVSIINF KPLTYDDYIF BACU001856/1-688 FSNDIQQMMG FKPGLYWRLC WKFVSPAFLL FVVVVSIINF KPLTYDDYIF bmy_02335T0/1-601 FSNDIQQMMG FKPGLYWRLC WKFVSPAFLL FVVVVSIINF KPLTYDDYIF 551 600 ENSP00000219833/1-628 PPWANWVGWG IALSSMVLVP IYVIYKFLST QGSLWERLAY GITPENEHHL ENSBTAP00000004354/1-615 PLWANWVGWG IAGSSMVLVP AYIVYKFFST RGSIRERLAY GITPESEHHL ENSTTRP00000001112/1-629 PLWANWVGWG IAGSSMVLVP AYVVYKFLST RGSLRERLAY GITPENEHHL BACU001856/1-688 PLWANWVGWG IAGSSMVLVP AYVVYKFLST RGSLRERLAY GITPENEHHL bmy_02335T0/1-601 PLWANWVGWG IAGSSMVLVP AYVVYKFLST RGSLLERLAY GITPENEHHL 601 650 ENSP00000219833/1-628 VAQRDIRQFQ M--------- -----KTRQG RRRATNSCQI SC-------- ENSBTAP00000004354/1-615 VAQRDIRQFQ L-QHW----- ---------- ---------- ---------- ENSTTRP00000001112/1-629 VAQRDVRQFQ M--------- -----RMRQR RRGPANSCQI SCQ------- BACU001856/1-688 VAQRDVRQFQ VGAAWTILMG ATGRGRGKTT HHTPENPEQL RAIAPGGVML bmy_02335T0/1-601 VAQRDVRQFQ L-EHW----- ---------- ---------- ---------- 651 700 ENSP00000219833/1-628 ---------- ---------- ---------- -------- ENSBTAP00000004354/1-615 ---------- ---------- ---------- -----LAI ENSTTRP00000001112/1-629 ---------- ---------- ---------- -------- BACU001856/1-688 RTEERGLSSS FYQLSPAPPL LGPEIPNAQT LLNSVLPL bmy_02335T0/1-601 ---------- ---------- ---------- -----LAI