KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:23:44 2014  Check: 00 ..

 Name: ENSBTAP00000004355/1-232  Len:    242  Check:  476  Weight:  1.00
 Name: ENSTTRP00000003708/1-242  Len:    242  Check:  9582  Weight:  1.00
 Name: ENSP00000424711/1-232     Len:    242  Check:  9370  Weight:  1.00
 Name: bmy_13839T0/1-232         Len:    242  Check:  302  Weight:  1.00
 Name: BACU012525/1-232          Len:    242  Check:  554  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000004355/1-232  MPGWFKKAWY GLASLLSFSS FILIIVALAL PHWLSGKILC QTGVDLVNAT 
ENSTTRP00000003708/1-242  MPGWFKKTWY GLASLLSLSS FILIIVALAL PHWLSGKILC QTGVDLVNAT 
ENSP00000424711/1-232     MPGWFKKAWY GLASLLSFSS FILIIVALVV PHWLSGKILC QTGVDLVNAT 
bmy_13839T0/1-232         MPGWFKKAWY GLASLLSFSS FILIIVALAV PHWLSGKILC QTGVDLVNAT 
BACU012525/1-232          MPGWFKKAWY GLASLLSFSS FILIIVALAV PHWLSGKILC QTGVDLVNAT 


                          51                                                 100
ENSBTAP00000004355/1-232  DPELVKFIGD IYYGLFRGCK VRQCGLGGRQ SQFT------ ----IFPHLV 
ENSTTRP00000003708/1-242  DPELVQFIGD IYYGLFRGCK VRQCGLGGRQ SQFTRSFPSG KGKAVFPHLV 
ENSP00000424711/1-232     DRELVKFIGD IYYGLFRGCK VRQCGLGGRQ SQFT------ ----IFPHLV 
bmy_13839T0/1-232         DPELVKFIGD IYYGLFRGCK VRQCGLGGRQ SQFT------ ----IFPHLV 
BACU012525/1-232          DPELVKFIGD IYYGLFRGCK VRQCGLGSRQ SQFT------ ----IFPHLV 


                          101                                                150
ENSBTAP00000004355/1-232  KELNAGLHVT LLLLLFLALA LALVSMGFAI LNMIQVPYRA VNGPGGICLW 
ENSTTRP00000003708/1-242  KELNAGLHVT ILFLLFLALA LALVSMGFAI LNMIQVPYRA VNGPGGICLW 
ENSP00000424711/1-232     KELNAGLHVM ILLLLFLALA LALVSMGFAI LNMIQVPYRA VSGPGGICLW 
bmy_13839T0/1-232         KELNAGLHVT ILLLLFLALV LALVSMGFAI LNMIQVPYQA VNGPGGICLW 
BACU012525/1-232          KELNAGLHVT ILLLLFLALV LALVSMGFAI LNMIQVPYQA VNGPGGICLW 


                          151                                                200
ENSBTAP00000004355/1-232  NVLAGGVVAL AIASFMTSVK FHDLTERIAN FREKLFRFVV VEEQYEESFW 
ENSTTRP00000003708/1-242  NVLAGGVVAL AIASFMAAVK FHDLTERIAN FQEKLFRFVV VEEEYEESFW 
ENSP00000424711/1-232     NVLAGGVVAL AIASFVAAVK FHDLTERIAN FQEKLFQFVV VEEQYEESFW 
bmy_13839T0/1-232         NVLAGGVVAL AIASFTAAVK FHDLTERIAN FQEKLFRFVV VEEEYEESFW 
BACU012525/1-232          NVLAGGVVAL AIASFTAAVK FHDLTERIAN FQEKLFRFVV VEEEYEESFW 


                          201                                                250
ENSBTAP00000004355/1-232  ICVASASAHA TNLVVVAISQ IPLPEVQAKI EEATVTAEDI LY 
ENSTTRP00000003708/1-242  ICVASASAHA TNLVVVAISQ IPLPEIKTKI EETTVTAEDI LY 
ENSP00000424711/1-232     ICVASASAHA ANLVVVAISQ IPLPEIKTKI EEATVTAEDI LY 
bmy_13839T0/1-232         ICVASASAHA TNLVVVAISQ IPLPEIKTKI EEATVTAEDI LY 
BACU012525/1-232          ICVASASAHA TNLVVVAISQ IPLPEIKTKI EEATVTAEDI LY