KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:46 2014 Check: 00 .. Name: ENSP00000438748/1-991 Len: 999 Check: 2694 Weight: 1.00 Name: ENSBTAP00000004365/1-999 Len: 999 Check: 8611 Weight: 1.00 Name: ENSTTRP00000016300/1-991 Len: 999 Check: 6144 Weight: 1.00 Name: bmy_03532T0/1-991 Len: 999 Check: 5081 Weight: 1.00 Name: BACU014004/1-980 Len: 999 Check: 2145 Weight: 1.00 // 1 50 ENSP00000438748/1-991 MAGPVSLRDL LMGASAWMGS ESPGGSPTEG GGSAAGGPEP PWREDEICVV ENSBTAP00000004365/1-999 MAGPVSLREL LMGASAWTSS ESPEGSPTEG GGSAAGGPEP PWREDEICVV ENSTTRP00000016300/1-991 MAGPVSLREL LMGASAWTGS ESPEGSPTEG GGSAAGGPEP PWREDEICVV bmy_03532T0/1-991 MAGPVSLREL LMGASAWTGS ESPEGSPTEG GGSAAGGPEP SWREDEICVV BACU014004/1-980 ---------- -MGASAWTGS ESPEGSPTEG GGSAAGGPEP SWREDEICVV 51 100 ENSP00000438748/1-991 GIFGKTALRL NSEKFSLVNT VCDRQVFPLF RHQDPGDPGP GIRTEAGAVG ENSBTAP00000004365/1-999 GIFGKTALRL NSEKFSLVNT VCDRQVFPLF RHQDPGDSGA GIRTEAGAVG ENSTTRP00000016300/1-991 GIFGKTALRL NSEKFSLVNT VCDRQVFPLF RRQDPGDSGP GIRTEAGVVG bmy_03532T0/1-991 GIFGKTALRL NSEKFSLVNT VCDRQVFPLF RHQDPGDSGP GIRTEAAVVG BACU014004/1-980 GIFGKTALRL NSEKFSLVNT VCDRQVFPLF RHQDPGDSGP GIRTEAAVVG 101 150 ENSP00000438748/1-991 EAGGAEDP-- ------GAAA GGSVRGSGAV AEGNRTEAGS QDYSLLQAYY ENSBTAP00000004365/1-999 EAGGAGDPGA GAGAGAGAGA GDPVRGGVTA AEGNRTEPGS QDYSLLQAYY ENSTTRP00000016300/1-991 EAGGAGVP-- ------GAGS GDPVRGGVAV AEGNRTEPGS QDYSLLQAYY bmy_03532T0/1-991 EAGGAGDP-- ------GAGS GDPVRGGVAV AEGNRTEPGS QDYSLLQAYY BACU014004/1-980 EAGGAGDP-- ------GAGS GDPVRGGVGV AEGNRTEPGS QDYSLLQAYY 151 200 ENSP00000438748/1-991 SQESKVLYLL LTSICDNSQL LRACRALQSG EAGGGLSLPH AEAHEFWKHQ ENSBTAP00000004365/1-999 NQESKVLYLL LTSICDNSQL LRACRALQSG EAGGGLSLPH AEAHEFWKHQ ENSTTRP00000016300/1-991 NQESKVLYLL LTSICDNSQL LRACRALQSG EAGGGLPLPH AEAHEFWKHQ bmy_03532T0/1-991 NQENKVLYLL LTSICDNSQL LRACRALQSG EAGGGLPLPH AEAHEFWKHQ BACU014004/1-980 NQENKVLYLL LTSICDNSQL LRACRALQSG EAGGGLPLPH AEAHEFWKHQ 201 250 ENSP00000438748/1-991 EKLQCLSLLY LFSVCHILLL VHPTCSFDIT YDRVFRALDG LRQKVLPLLK ENSBTAP00000004365/1-999 EKVQCLSLLY LFSVCHILLL VHPTCSFDIT YDRVFRALDG LRQKVLPLLK ENSTTRP00000016300/1-991 EKLQCLSLLY LFSVCHILLL VHPTCSFDIT YDRVFRALDG LRQKVLPLLK bmy_03532T0/1-991 EKLQCLSLLY LFSVCHILLL VHPTCSFDIT YDRVFRALDG LRQKVLPLLK BACU014004/1-980 EKLQCLSLLY LFSVCHILLL VHPTCSFDIT YDRVFRALDG LRQKVLPLLK 251 300 ENSP00000438748/1-991 TAIKDCPVGK DWKLNCRPCP PRLLFLFQLN GALKVEPPRN QDPAHPDKPK ENSBTAP00000004365/1-999 TAIKDCPVGK DWKLNCRPCP PRLLFLFQLN GALKVEPPRN QDPAHPDKPK ENSTTRP00000016300/1-991 TAIKDCPVGK DWKLNCRPCP PRLLFLFQLN GALKVEPPRN QDPAHPEKPK bmy_03532T0/1-991 TAIKDCPVGK DWKLNCRPCP PRLLFLFQLN GALKVEPPRN QDPAHPEKPK BACU014004/1-980 TAIKDCPVGK DWKLNCRPCP PRLLFLFQLN GTLKVEPPRN QDPAHPEKPK 301 350 ENSP00000438748/1-991 KHSPKRRLQH ALEDQIYRIF RKSRVLTNQS INCLFTVPAN QAFVYIVPGS ENSBTAP00000004365/1-999 KHSPKRRLQH ALEDQIYRIF RKSRVLTNQS INCLFTVPAN QAFVYIVPGS ENSTTRP00000016300/1-991 KHSPKRRLQH ALEDQIYRIF RKSRVLTNQS INCLFTVPAN QAFVYIVPGS bmy_03532T0/1-991 KHSPKRRLQH ALEDQIYRIF RKSRVLTNQS INCLFTVPAN QAFVYIVPGS BACU014004/1-980 KHSPKRRLQH ALEDQIYRIF RKSRVLTNQS INCLFTVPAN QAFVYIVPGS 351 400 ENSP00000438748/1-991 QEEDPVGMLL DQLRSHCTVK DPESLLVPAP LSGPRRYQVM RQHSRQQLSF ENSBTAP00000004365/1-999 QEEDPVGMLL DQLKSHCTVK DPESLLVPAP LSGSRRYQVM RQHSRQQLSF ENSTTRP00000016300/1-991 QEEDPVGMLL DQLRSHCTVK DPESLLVPAP LSGSRRYQVM RQHSRQQLSF bmy_03532T0/1-991 QEEDPVGMLL DQLRSHCTVK DPESLLVPAP LSGSRRYQVM RQHSRQQLSF BACU014004/1-980 QEEDPVGMLL DQLRSHCTVK DPESLLVPAP LSGSRRYQVM RQHSRQQLSF 401 450 ENSP00000438748/1-991 HIDSSSSSSS GQLVDFTLRE FLWQHVELVL SKKGFDDSVG RNPQPSHFEL ENSBTAP00000004365/1-999 HTDTSSSSSS GQLVDFTLRE FLWQHVELVL SKKGFDDSVG RNPQPSHFEL ENSTTRP00000016300/1-991 HTDTSSSSSS GQLVDFTLRE FLWQHVELVL SKKGFDDSVG RNPQPSHFEL bmy_03532T0/1-991 HTDTSSSSSS GQLVDFTLRE FLWQHVELVL SKKGFDDSVG RNPQPSHFEL BACU014004/1-980 HTDTSSSSSS GQLVDFTLRE FLWQHVELVL SKKGFDDSVG RNPQPSHFEL 451 500 ENSP00000438748/1-991 PTYQKWISAA SKLYEVAIDG KEEDLGSPTG ELTSKILSSI KVLEGFLDID ENSBTAP00000004365/1-999 PTYQKWISAA SKLYEVAIDG KEEDPASPTG ELTSKILSSI KVLEGFLDID ENSTTRP00000016300/1-991 PTYQKWISAA SKLYEVAIDG KEEDPGSPTG ELTSKILSSI KVLEGFLDID bmy_03532T0/1-991 PTYQKWISAA SKLYEVAIDG KEEDPGSPTG ELTSKILSSI KVLEGFLDID BACU014004/1-980 PTYQKWISAA SKLYEVAIDG KEEDPGSPTG ELTSKILSSI KVLEGFLDID 501 550 ENSP00000438748/1-991 TKFSENRCQK ALPMAHSAYQ SNLPHNYTMT VHKNQLAQAL RVYSQHARGP ENSBTAP00000004365/1-999 TKFSENRCQK ALPMAHSAYQ SNLPHNYTMT VHKNQLAQAL RVYSQHARGP ENSTTRP00000016300/1-991 TKFSENRCQK ALPMAHSAYQ SNLPHNYTMT VHKNQLAQAL RVYSQHARGP bmy_03532T0/1-991 TKFSENRCQK ALPMAHSAYQ SNLPHNYTMT VHKNQLAQAL RVYSQHARGP BACU014004/1-980 TKFSENRCQK ALPMAHSAYQ SNLPHNYTMT VHKNQLAQAL RVYSQHARGP 551 600 ENSP00000438748/1-991 AFHKYAMQLH EDCYKFWSNG HQLCEERSLT DQHCVHKFHS LPKSGEKPEA ENSBTAP00000004365/1-999 AFHKYAMQLH EDCYKFWSNG HQLCEERSLT DQHCVHKFHS LPKSGEKPEA ENSTTRP00000016300/1-991 AFHKYAMQLH EDCYKFWSNG HQLCEERSLT DQHCVHKFHS LPKSGEKPEP bmy_03532T0/1-991 AFHKYAMQLH EDCYKFWSNG HQLCEERSLT DQHCVHKFHS LPKSGEKPEP BACU014004/1-980 AFHKYAMQLH EDCYKFWSNG HQLCEERSLT DQHCVHKFHS LPKSGEKPEP 601 650 ENSP00000438748/1-991 DRNPPVLYHN SRARSTGACN CGRKQAPRDD PFDIKAANYD FYQLLEEKCC ENSBTAP00000004365/1-999 DRNPPVLYHN SRARSTGACN CGRKQAPRDD PFDIKAANYD FYQLLEEKCC ENSTTRP00000016300/1-991 DRNPPVLYHN SRARSTGACN CGRKQAPRDD PFDIKAANYD FYQLLEEKCC bmy_03532T0/1-991 DRNPPVLYHN SRARSTGACN CGRKQAPRDD PFDIKAANYD FYQLLEEKCC BACU014004/1-980 DRNPPVLYHN SRARSTGACN CGRKQAPRDD PFDIKAANYD FYQLLEEKCC 651 700 ENSP00000438748/1-991 GKLDHINFPV FEPSTPDPAP AKNESSPAPP DSDADKLKEK EPQTQGESTS ENSBTAP00000004365/1-999 GKLDHINFPV FEPSTPDPAP AKNESSPAPP DADADKLKEK EPQTQGESTS ENSTTRP00000016300/1-991 GKLDHINFPV FEPSTPDPAP AKNESSPAPP DADADKLKEK EPQTQGESTS bmy_03532T0/1-991 GKLDHINFPV FEPSTPDPAP AKNESSPAPP DADADKLKEK EPQTQGESTS BACU014004/1-980 GKLDHINFPV FEPSTPDPAP AKNESSPAPP DADADKLKEK EPQTQGESTS 701 750 ENSP00000438748/1-991 LSLALSLGQS TDSLGTYPAD PQAGGDNPEV HGQVEVKTEK RPNFVDRQAS ENSBTAP00000004365/1-999 LSLALSLGQS TDSLGTYPAD PQAGGDNPEV HGQGEVKTEK RPNLVDRQAS ENSTTRP00000016300/1-991 LSLALSLGQS TDSLGTYPAD PQAGGDNPEV HGQGEVKTEK RPNLVDRQAS bmy_03532T0/1-991 LSLALSLGQS TDSLGTYPAD PQAGGDNPEV HGQGEVKTEK RPNLVDRQAS BACU014004/1-980 LSLALSLGQS TDSLGTYPAD PQAGGDNPEV HGQGEVKTEK RPNLVDRQAS 751 800 ENSP00000438748/1-991 TVEYLPGMLH SNCPKGLLPK FSSWSLVKLG PAKSYNFHTG LDQQGFIPGT ENSBTAP00000004365/1-999 TVEYLPGMLH SNCPKGLLPK FSSWSLVKLG PAKSYNFHTG LDQQGFIPGT ENSTTRP00000016300/1-991 TVEYLPGMLH SNCPKGLLPK FSSWSLIKLG PAKSYNFHTG LDQQGFIPGT bmy_03532T0/1-991 TVEYLPGMLH SNCPKGLLPK FSSWSLVKLG PAKSYNFHTG LDQQGFIPGT BACU014004/1-980 TVEYLPGMLH SNCPKGLLPK FSSWSLVKLG PAKSYNFHTG LDQQGFIPGT 801 850 ENSP00000438748/1-991 NYLMPWDIVI RTRAEDEGDL DTNSWPAPNK AIPGKRSAVV MGRGRRRDDI ENSBTAP00000004365/1-999 NYLMPWDIVI RTRAEDEGDL DTNSWPAPNK AVPGKRSAVV MGRGRRRDDI ENSTTRP00000016300/1-991 NYLMPWDIVI RTRAEDEGDL DTNSWPAPNK AVPGKRSAVV MGRGRRRDDI bmy_03532T0/1-991 NYLMPWDIVI RTRAEDEGDL DTNSWPAPNK AVPGKRSAVV MGRGRRRDDI BACU014004/1-980 NYLMPWDIVI RTRAEDEGDL DTNSWPAPNK AVPGKRSAVV MGRGRRRDDI 851 900 ENSP00000438748/1-991 ARAFVGFEYE DSRGRRFMCS GPDKVMKVMG SGPKESALKA LNSDMPLYIL ENSBTAP00000004365/1-999 ARAFVGFEYE DSRGRRFMCS GPDKVMKVMG SGPKESALKA LNSDMPLYIL ENSTTRP00000016300/1-991 ARAFVGFEYE DSRGRRFMCS GPDKVMKVMG SGPKESALKA LNSDMPLYIL bmy_03532T0/1-991 ARAFVGFEYE DSRGRRFMCS GPDKVMKVMG SGPKESALKA LNSDMPLYIL BACU014004/1-980 ARAFVGFEYE DSRGRRFMCS GPDKVMKVMG SGPKESALKA LNSDMPLYIL 901 950 ENSP00000438748/1-991 SSSQGRGLKP HYAQLMRLFV VVPDAPLQII LMPQVQPGPP PCPVFYPEKQ ENSBTAP00000004365/1-999 SSSQGRGLKP HYAQLMRLFV VVPDAPLQII LTPQVQPGPP PCPVFYPEKQ ENSTTRP00000016300/1-991 SSSQGRGLKP HYAQLMRLFV VVPDAPLQII LMPQVQPGPP PCPVFYPEKQ bmy_03532T0/1-991 SSSQGRGLKP HYAQLMRLFV VVPDAPLQII LMPQVQPGPP PCPVFYPEKQ BACU014004/1-980 SSSQGRGLKP HYAQLMRLFV VVPDAPLQII LMPQVQPGPP PCPVFYPEKQ 951 1000 ENSP00000438748/1-991 EITLPPDGLW VLRFPYAYVT ERGPCFPPKE NVQLMSYKVL RGVLKAVTQ ENSBTAP00000004365/1-999 EITLPPDGLW VLRFPYAYVT ERGPCFPPKE NVQLMSYKVL RGVLKAVTQ ENSTTRP00000016300/1-991 EITLPPDGLW VLRFPYAYVT ERGPCFPTKE NVQLMSYKVL RGVLKAVTQ bmy_03532T0/1-991 EITLPPDGLW VLRFPYAYVT ERGPCFPTKE NVQLMSYKVL RGVLKAVTQ BACU014004/1-980 EITLPPDGLW VLRFPYAYVT ERGPCFPTKE NVQLMSYKVL RGVLKAVTQ