KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:47 2014 Check: 00 .. Name: ENSTTRP00000006337/1-321 Len: 398 Check: 1901 Weight: 1.00 Name: ENSBTAP00000004373/1-311 Len: 398 Check: 5127 Weight: 1.00 Name: bmy_04192T0/1-398 Len: 398 Check: 4289 Weight: 1.00 Name: ENSP00000261247/1-311 Len: 398 Check: 3920 Weight: 1.00 Name: BACU015384/1-232 Len: 398 Check: 542 Weight: 1.00 // 1 50 ENSTTRP00000006337/1-321 ------KLSK ETYKLP---- ---------- ---------- ---------- ENSBTAP00000004373/1-311 ---------- ---------- ---------- ---------- ---------- bmy_04192T0/1-398 MGIDYCTATR ASSRLSTRLL RARGPGRSAT SGAGPSSRDR GARGGAGLRS ENSP00000261247/1-311 ---------- ---------- ---------- ---------- ---------- BACU015384/1-232 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006337/1-321 ---------M AVDIQPACLG LYCGK----- ---------- -TLLFKNGST ENSBTAP00000004373/1-311 ---------M AVDIQPACLG LYCGK----- ---------- -TLLFKNGST bmy_04192T0/1-398 GRPGYQEAEP SRRLWPGCPG AAAGSADPRT SPRKPTSCRW LSIFNQHALD ENSP00000261247/1-311 ---------M AVDIQPACLG LYCGK----- ---------- -TLLFKNGST BACU015384/1-232 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006337/1-321 EIYGEC---- --------GV CPRGQRTNAQ KYCQPCTESP ELYDWLYLGF ENSBTAP00000004373/1-311 EIYGEC---- --------GV CPRGQRTNAQ KYCQPCTESP ELYDWLYLGF bmy_04192T0/1-398 FIVGRPCYLK MAQLKYMENV CPRGQRTNAQ KYCQPCTESP ELYDWLYLGF ENSP00000261247/1-311 EIYGEC---- --------GV CPRGQRTNAQ KYCQPCTESP ELYDWLYLGF BACU015384/1-232 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000006337/1-321 MAMLPLVLHW FFIEWYSGKK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000004373/1-311 MAMLPLVLHW FFIEWYSGKK SSSALFQHIT ALFECTVAAL VTLLVSEPVG bmy_04192T0/1-398 MAMLPLVLHW FFIEWYSGKK SSSALFQHIT ALFECTMAAI ITLLVSDPVG ENSP00000261247/1-311 MAMLPLVLHW FFIEWYSGKK SSSALFQHIT ALFECSMAAI ITLLVSDPVG BACU015384/1-232 ---------- ------MENV GSSALFQHIT ALFECTMAAI ITLLVSDPVG 201 250 ENSTTRP00000006337/1-321 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX YTIVFIYYAF ENSBTAP00000004373/1-311 VLHIRSCRVL MLSDWYTMLY NPSPDYVTTV HCTHEAVYPL YTIVFIYYAF bmy_04192T0/1-398 VLYIHSCRVL MLSDWYTMLY NPSPDYVTTV HCTHEAVYPL YTIVFIYYAF ENSP00000261247/1-311 VLYIRSCRVL MLSDWYTMLY NPSPDYVTTV HCTHEAVYPL YTIVFIYYAF BACU015384/1-232 VLYIRSCRVL MLSDWYTMLY NPSPDYVTTV HCTHEAVYPL YTIVFIYYAF 251 300 ENSTTRP00000006337/1-321 CLVLMMLLRP LLVKKIACGL GKSDRFKSIY AALYFFPILT VLQAVGGGLL ENSBTAP00000004373/1-311 CLVLMMLLRP LLVKKIACGL GKSDRFKSIY AALYFFPILT VLQAVGGGLL bmy_04192T0/1-398 CLVLMMLLRP LLVKKIACGL GKSDRFKSIY AALYFFPILT VLQAVGGGLL ENSP00000261247/1-311 CLVLMMLLRP LLVKKIACGL GKSDRFKSIY AALYFFPILT VLQAVGGGLL BACU015384/1-232 CLVLMMLLRP LLVKKIACGL GKSDRFKSIY AALYFFPILT VLQAVGGGLL 301 350 ENSTTRP00000006337/1-321 YYAFPYIILV LSLVTLAVYM SASEIENCYD LLVRKKRLIV LFSHWLLHAY ENSBTAP00000004373/1-311 YYAFPYIILV LSLVTLAVYM SASEIENCYD LLVRKKRLIV LFSHWLLHAY bmy_04192T0/1-398 YYAFPYIILV LSLVTLAVYM SASEIENCYD LLVRKKRLIV LFSHWLLHAY ENSP00000261247/1-311 YYAFPYIILV LSLVTLAVYM SASEIENCYD LLVRKKRLIV LFSHWLLHAY BACU015384/1-232 YYAFPYIILV LSLVTLAVYM SASEIENCYD LLVRKKRLIV LFSHWLLHAY 351 400 ENSTTRP00000006337/1-321 GIISISRVDK LEQDLPLLAL VPTPALFYLF TAKFTEPSRI LSEGANGH ENSBTAP00000004373/1-311 GIISISRVDK LEQDLPLLAL VPTPALFYLF TAKFTEPSRI LSEGANGH bmy_04192T0/1-398 GIISISRVDK LEQDLPLLAL VPTPALFYLF TAKFTEPSRI LSEGANGH ENSP00000261247/1-311 GIISISRVDK LEQDLPLLAL VPTPALFYLF TAKFTEPSRI LSEGANGH BACU015384/1-232 GIISISRVDK LEQDLPLLAL VPTPALFYLF TAKFTEPSRI LSEGANGH