KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:47 2014 Check: 00 .. Name: ENSP00000387882/1-490 Len: 490 Check: 1327 Weight: 1.00 Name: ENSBTAP00000004377/1-490 Len: 490 Check: 3934 Weight: 1.00 Name: ENSTTRP00000007624/1-485 Len: 490 Check: 8888 Weight: 1.00 Name: bmy_14437T0/1-389 Len: 490 Check: 1547 Weight: 1.00 Name: BACU019395/1-490 Len: 490 Check: 1496 Weight: 1.00 // 1 50 ENSP00000387882/1-490 MATEFIKSCC GGCFYGETEK HNFSVERDFK AAVPNSQNAT ISVPPLTSVS ENSBTAP00000004377/1-490 MATEFIKSCC RGCFYGGTEK HNLSVERDFK AAVSHSQNTT ISIPPLTSVS ENSTTRP00000007624/1-485 MATEFIKSCC RGCFYGGTEK HNLSVERDFK AAVSNSQNTA ICIPPLTSVS bmy_14437T0/1-389 MATEFIKSCC RGCFYGGTEK HDLSVERDFK AAVSNSQNTA ICKPPLTSVS BACU019395/1-490 MATEFIKSCC RGCFYGGTEK HDLSVERDFK ATVSNSQNTA VCKPPLTSVS 51 100 ENSP00000387882/1-490 VKPQLGCTED YLLSKLPSDG KEVPFVVPKF KLSYIQPRTQ ETPSHLEELE ENSBTAP00000004377/1-490 VKPQVGCTED YLLSKLPSDG KEVPFVVPRF KLSYIQPRMQ GTPSQLEELE ENSTTRP00000007624/1-485 VKPQVGCTED YLLSKLPSDG KEVPFVVPRF KLSYIQPRMQ GTPSHLEELE bmy_14437T0/1-389 VKPQVGCTED YLLSKLPSDG KEVPFVVPRF KLSYIQPRMQ GTPSHLEELE BACU019395/1-490 VKPQVGCTED YLLSKLPSDG KEVPFVVPRF KLSYIQPRMQ GTPSHLEELE 101 150 ENSP00000387882/1-490 GSARASFGDR KVELSSSSQH GPSYDVYNPF YMYQHISPDL SRRFPPRSEV ENSBTAP00000004377/1-490 GSARASFGDR KAELSSSAQQ GPSYDVYNPF YKYQHVSPDL SRRFPPRSEA ENSTTRP00000007624/1-485 GSARASFGAR KVELSSSSQH GPSYDVYNPF YMYQHVSPDL SRRFLPRSET bmy_14437T0/1-389 GSARASFGAR KVELSSSXQH GPSYDVYNPF YMYQHVSPDL SRRFPPHSET BACU019395/1-490 GSARASFGAR KVELSSSSQH GPSYDVYNPF YMYQHVSPDL SRRFPPCSET 151 200 ENSP00000387882/1-490 KRLYGSVCDL RTNKLPGSPG LSKSMFDLTN SSQRFIQRHD SLSSVPSSSS ENSBTAP00000004377/1-490 TRLYGSVCDL RTNRLPSSPG LSKSMFDLTS SSQRFIQRHD SLSSVPSSSS ENSTTRP00000007624/1-485 TKRYGSVCDL RTNRLPNSPG LSKSMFDLTS SSQQFIQRHD SLSSMPSSSS bmy_14437T0/1-389 TKRYGS---- ---------- ---------- ---------- ---------- BACU019395/1-490 TKRYGSVCDL RTNRLPNSPG LSKSMFDLTS SSQQFIQRHD SLSSMPSSSS 201 250 ENSP00000387882/1-490 SRKNSQGSNR SLDTITLSGD ERDFGRLNVK LFYNSSVEQI WITVLQCRDL ENSBTAP00000004377/1-490 SRKNSQGSNR SLDTITLSGD ERDWGRLNVK VFYNSSVEQI WITVLQCRDL ENSTTRP00000007624/1-485 SRKNSQGSNR SLDTITLSGD ERDLGRLNVK MFYNSSVEQI WITVLQ---- bmy_14437T0/1-389 ---------- --DTITLSGD ERDLGRLNVK MFYNSSVEQI WITVLQCRDL BACU019395/1-490 SRKNSQGSNR SLDTITLSGD ERDLGRLNVK MFYNSSVEQI WITVLQCRDL 251 300 ENSP00000387882/1-490 SWPSSYGDTP TVSIKGILTL PKPVHFKSSA KEGSNAIEFM ETFVFAIKLQ ENSBTAP00000004377/1-490 SWPSRYGDTP TISVKGILTL PKPVHFKSSV KEGSNNIEFM ETFVFSIKLQ ENSTTRP00000007624/1-485 -WPSSYGDNP TISIKGILTL PKPVHFKSSV KEGSNTIEFM ETFVFAIKLH bmy_14437T0/1-389 SWPSSYGDNP TISVKGILTL PKPVHFKSSV KEGANTIEFM ETFVFAIKLH BACU019395/1-490 SWPSSYGDNP TISVKGILTL PKPVHFKSSV KEGSNTIEFM ETFVFAIKLH 301 350 ENSP00000387882/1-490 NLQTVRLVFK IQTQTPRKKT IGECSMSLRT LSTQEMDYSL DITPPSKISV ENSBTAP00000004377/1-490 SLQTVRLVFK IQTQTPRKKT IGECSLSLRT LSTQEMDYSL DISPPSKISV ENSTTRP00000007624/1-485 SLQTVRLVFK IQTQTPRKKT IGECSLSLRT LSTQEMDYSL DISPPSKISV bmy_14437T0/1-389 SLQT------ ---------- ---------- ---------- ---------V BACU019395/1-490 SLQTVRLVFK IQTQTPRKKT IGECSESLRT LSTQEMDYSL DISPPSKISV 351 400 ENSP00000387882/1-490 CHAELELGTC FQAVNSRIQL QILEARYLPS SSTPLTLSFF VKVGMFSSGE ENSBTAP00000004377/1-490 CHAELELGTC FQAVNSRIQL QILEAQYLPS SSTPLTLSFF VKVAMFSSGE ENSTTRP00000007624/1-485 CHAELELGTC FQAVNSRIQL QILEAQYLPS SSTPLTWSFF VKVAMFSSGE bmy_14437T0/1-389 CHAELELGTC FQAVNSRIQL QILEAQYLPS SSTPLTLSFF VKVAMFSLGE BACU019395/1-490 CHAELELGTC FQAVNSRIQL QILEAQYLPS SSTPLTLSFF VKVAMFSLGE 401 450 ENSP00000387882/1-490 LIYKKKTRLL KASNGRVKWG ETMIFPLIQS EKEIVFLIKL YSRSSVRRKH ENSBTAP00000004377/1-490 LIYKKKTRLL KASNGRVKWG ETMIFPLIQS EKEIIFLIKL YSRSSVGRRH ENSTTRP00000007624/1-485 LIYKKKTRLL KASNGRVKWG ETMIFPLIQN EKEITFLIKL YSRSSVGRRH bmy_14437T0/1-389 LIYKKKTRLL KASNGRVKWG EXMIFPLIQN EKEIIFLIKL YSRSSVGRRH BACU019395/1-490 LIYKKKTRLL KASNGRVKWG ETMIFPLIQN EKEIIFLIKL YSRSSVGRRH 451 500 ENSP00000387882/1-490 FVGQIWISED SNNIEAVNQW KETVINPEKV VIRWHKLNPS ENSBTAP00000004377/1-490 FVGQIWISED SNNTEAVSQW KETVTHPEKV VVKWHKLNPS ENSTTRP00000007624/1-485 FVGQIWISED SNNIEAANQW KETVKNPEKV VIKWHKLNPS bmy_14437T0/1-389 FVGQIWISED SNNIEAANQW KETVTNPEKV VIKWHKLNPS BACU019395/1-490 FVGQIWISED SNDIEAANQW KETVTNPEKV VIKWHKLNPS