KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:51 2014 Check: 00 .. Name: ENSP00000385215/1-1403 Len: 1411 Check: 2464 Weight: 1.00 Name: ENSTTRP00000010017/1-1402 Len: 1411 Check: 1131 Weight: 1.00 Name: ENSBTAP00000004386/1-1402 Len: 1411 Check: 8662 Weight: 1.00 Name: bmy_18367T0/1-1371 Len: 1411 Check: 4056 Weight: 1.00 Name: BACU016904/1-1405 Len: 1411 Check: 9322 Weight: 1.00 // 1 50 ENSP00000385215/1-1403 MANCSQEELD EEFEQFMKEL SDDSFENSDK TARQSKKEMK KKDTVPWWIT ENSTTRP00000010017/1-1402 MAHYSKEELD EEFEQFMKEL SDDSFENSNK TPRQP-KEVK KNDTVPWWIT ENSBTAP00000004386/1-1402 MAHYSKEELD EEFEQFMKEL SDDSFENSNK TPRQP-KEVK KKDTVPWWIT bmy_18367T0/1-1371 MAHYSKEELD EEFEQFMKEL SDDSFENSNK TPRQP-KEVK KNDTMPWWIT BACU016904/1-1405 MAHYSKEELD EEFEQFMKEL SDDSFENSNK TPRQP-KEVK KNDTMPWWIT 51 100 ENSP00000385215/1-1403 EDDFKDDGLL GTNVSYLKTK KTSQPVMEIE EESAEKIQFL KSSGTSLLST ENSTTRP00000010017/1-1402 EDEFEDGGLL GTNVSYLKTK KTPQPIMEIE EESAERIQFL KSSGTSILSI ENSBTAP00000004386/1-1402 EDEFESGGPF GTNVSYLKTK KTSQPVKETE EESAERIQFL KSSGTSILSI bmy_18367T0/1-1371 EDEFEDGGLL GTNVSYLKTK XTPQPIMEIE EESAERIQFL KSSGTSILSV BACU016904/1-1405 EDEFEDGGLL GTNVSYLKTK KTPQPVMEIE EESAERIQFL KSSGTSILSI 101 150 ENSP00000385215/1-1403 DSLETNELVV SELNHSSLGV GLDTLEEQEE KEQFFARLEK GLTSSIDYSR ENSTTRP00000010017/1-1402 DSLEANEIVV PELNQSILGL GLDTLAEQEE KEQFFARLEK GFTSSIDYSR ENSBTAP00000004386/1-1402 DSLEANEI-V SELNHSVLGL GLDTLEEQEE KEQFFARLEK GLTSSIDYSR bmy_18367T0/1-1371 DSLEANEIVV PELNHSVLGL GLDTLEEQEE KEQFFARLEK GFTSSIDYSR BACU016904/1-1405 DSLEANEIVV PELNHSVLGL GLDTLEEQEE KEQFFARLEK GFTSSIDYSR 151 200 ENSP00000385215/1-1403 LNKELDSNDS THFKALHSNQ ANAELTDDEH ENESKHEELA ENYSDDFED- ENSTTRP00000010017/1-1402 LNKELDSNDS THFKALHSNQ ANVELTEDKH EDESKHEELA ENYSDDFED- ENSBTAP00000004386/1-1402 LNKELDSNDS IHFKALHSNQ ANMDLTEDKH EHESKHEELT ENYSDDFEDE bmy_18367T0/1-1371 LNKELDSNDS THFKALHSNQ ANVELTEDKH EDESKHEELA ENYSDDFEDE BACU016904/1-1405 LNKELDSNDS THFKALHSNQ ANVELTEDKH EDESKHEELA ENYSDDFEDE 201 250 ENSP00000385215/1-1403 EYVGAPLTTK DEEMPSKENS KSEKISVPKQ EEEKTGMLAN VVLLDSLDSV ENSTTRP00000010017/1-1402 EDIDVPLTPK -EETNSKENS KSEKINVPKQ -EEKLGMLA- VVLLDSLDSV ENSBTAP00000004386/1-1402 EDVDAPLTLK -GETKSKEDS QSEKTNVPKQ EEEKTGMLAN VVLLDSLDSV bmy_18367T0/1-1371 EDIDAPLTPK -EETNSKENS KSEKINVPKQ EEEKAGMLAN VVLLDSLDSV BACU016904/1-1405 EDIDAPLTPK -EETNSKENS KSEKINVPKQ EEEKTGMLAN VVLLDSLDSV 251 300 ENSP00000385215/1-1403 AEVNLDEQDK ITPKPRCLPE MTENEMTGTG VSYGQSSSDV EALHQAYCHI ENSTTRP00000010017/1-1402 AEVNLDDQER ATTNPEALPD MTDNEMTGTG VSYGQSSSDI EALHQAYCHI ENSBTAP00000004386/1-1402 AEVSLDEQDR TKTKPKAVSD MTDNEMIGTG ISYGQSNSDI EALHQAYCHV bmy_18367T0/1-1371 AEVNLDDQER ATTKPEALPD MTDNEMTGTG VSYGQSNSDI EALHQAYCHI BACU016904/1-1405 AEVNLDDQER ATTKPEALPD MTDNEMTGTG VSYGQSNSDI EALHQAYCHI 301 350 ENSP00000385215/1-1403 AHSLGDEDKQ KIESNTVEDI KSSVKGHPQE NEENSKNIST MESDLPTVEE ENSTTRP00000010017/1-1402 AHSLGDADEQ RPESNAVENT KNSAKDHPQE NEASSKNVST TESDLPTVEE ENSBTAP00000004386/1-1402 AHSLGDADEQ RTESNAAENT KSSTKDHPQE NEGSSKNIST TESDLPTVEE bmy_18367T0/1-1371 AHSLGDADEQ RPERNAVENT KNSAKDHPQE NEGSSKNIST TESDLPTVEE BACU016904/1-1405 AHSLGDADEQ RPERNAVENT KNSAKDHPQE NEGSSKNIST TESDLPTLEE 351 400 ENSP00000385215/1-1403 LMKPIRIDSF GISGFDLQPV SSEKVAERKE TEFFSSLPLK MNPNILSQDS ENSTTRP00000010017/1-1402 LMKPIRIDSF GVSGFDLQPL SYKKLAENKE SEFVRPLPLN MNQNVMSQEP ENSBTAP00000004386/1-1402 LMKPIRIDSF GVSGFDLQPV SYKKLAENKE TEFVSPLPLK INPNVVSQEP bmy_18367T0/1-1371 LMKPIRIDSF GVSGFDLQPL SYKKLAENKE SEFVRPLPLN KNPNVMSQEP BACU016904/1-1405 LMKPIRIDSF GVSGFDLQPL SYKKLAENKE SEFVRPLPLN MNPNVMSQEP 401 450 ENSP00000385215/1-1403 QHVNLFFDKN DENVILQKTT NESMENSCPQ VTEVTATEEH VDKMYLNILR ENSTTRP00000010017/1-1402 QTVNQFLDRN EENVVLEKAT NEGTETNHPR VNAV---EEQ IDKMYLDILK ENSBTAP00000004386/1-1402 QTVSQLLDKN EENVVLEKAT NEVTENNYPR ANAV---EEQ IDKMYLDILK bmy_18367T0/1-1371 RTVNQFLDRN EENVVLEKAT NEGTETNHPR VNTV---EEQ IDKMYLDILK BACU016904/1-1405 RTVNQFLDRN EENVVLEKAT NEGTETNHPR VNTV---EEQ IDKMYLDILK 451 500 ENSP00000385215/1-1403 KKITVNSSSL SQDDKINKTY RSQLSSEEEG AVMGKQVPYK KARSAPPLLK ENSTTRP00000010017/1-1402 KKMSVGPSLL PQDDKINKTF RSQLSSGEEG AGIGKQLPYK KARSAPPLFK ENSBTAP00000004386/1-1402 KKISVGPSLL PQDDKTNKTL RSQLDSGEEG TITGKQLPYK KTKSAPPLFK bmy_18367T0/1-1371 KKISVGPSLL PQDDKINKTF RSQLSSGEEG AGIGKQLPYK KARSAPPLFK BACU016904/1-1405 KKISVGPSLL PQDDKINKTS RSQLSSGEEG AGIGKQLPYK KARSAPPLFK 501 550 ENSP00000385215/1-1403 RKPQSGLYAS VRSSGYGKPS SPLKMFSTLE KKTSEDIIKS KNLRSISTSN ENSTTRP00000010017/1-1402 RKPQSGLYAS VRSSGYGKPS SPFKTFSNLE KKTSKDIMKS KSLRSIPTSN ENSBTAP00000004386/1-1402 RKPQSGLYAS VRSSGYGKPS SPFKTFSNLE KKTSKDIMKS KNLRSILASN bmy_18367T0/1-1371 RKPQSGLYAS VRSSGYGKPS SPFKTFSNLE KKTSKDIMKS KSLRSIPTSN BACU016904/1-1405 RKPQSGLYAS VRSSGYGKPS SPFKTFSNLE KKTSKDIMKS KSLRSIPTSN 551 600 ENSP00000385215/1-1403 QPRKKEILSG TKLIKPAALD KPAHKTESCL STRKKSENPT ETDSCIQFQT ENSTTRP00000010017/1-1402 QARKKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000004386/1-1402 QSRKKEILPA TKLIKPASLG KPAPQTESWL ATPKSSEGPT EADSCVQFQN bmy_18367T0/1-1371 QARKKEIFSG TRLIRPAALG KPAPQTESCL ATPKKSEGTT EADSCAQVQN BACU016904/1-1405 QARKKEIFSG TRLIRPAALG KPAPQTESCL ATPKKSEGTT EADSCAQVQN 601 650 ENSP00000385215/1-1403 DSLGYCGENK EKKLLMFKRV QEAEDKWRGA QALIEQIKAT FSEKEKELEN ENSTTRP00000010017/1-1402 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000004386/1-1402 DSSGYHGGNK ETELLMFKRV QEAEEKWKGA QALIEQIKVT FSEKEKELEN bmy_18367T0/1-1371 DSSGYHGGNK ETELIMLKRV QEAEEKWRGA QALXEQIKVT FSEKERELEN BACU016904/1-1405 DSSEYHGGNK ETELIMLKRV QEAEEKWRGA QALIEQIKVT FSEKERELEN 651 700 ENSP00000385215/1-1403 KLEELKKQQE KELFKLNQDN YILQAKLSSF EETNKKQRWL HFGEAADPVT ENSTTRP00000010017/1-1402 XXXXXXXXXX XXXXRLNQDN YILQAKLSGF EESNKKQRWL HFGETADPVT ENSBTAP00000004386/1-1402 KMEELKRQQE KELFRLNQDN YILQAKLSSF EESNKKHRWL HLGETTDPVT bmy_18367T0/1-1371 KMEELKRQQE KELFRLNQDN YILXAKLSGF EESNKKQRWL HFGETADPVT BACU016904/1-1405 KMEELKRQQE KELFRLNQDN YILQAKLSGF EESNKKRRWL HFGETADPVT 701 750 ENSP00000385215/1-1403 GEKLKQIQKE IQEQETLLQG YQQENERLYN QVKDLQEQNK KNEERMFKEN ENSTTRP00000010017/1-1402 EEKLKQIQKE IQEQETLLQG YQQENEKLYN QVKDLQEQNK KNEERMFKEN ENSBTAP00000004386/1-1402 EEKLKQIQKE IQEQEMLLQG YQQENEKLYN QVKDLQEQNK KNEERMFKEN bmy_18367T0/1-1371 EEKLKQIQKE IEEQETLLQG YQQENEKLYN QVKDLQEQNK KNEERMFKEN BACU016904/1-1405 EEKLKQIQKE IEEQETLLQG YQQENEKLYN QVKDLQEQNK KNEERMFKEN 751 800 ENSP00000385215/1-1403 QSLFSEVASL KEQMHKSRFL SQVVEDSEPT RNQNFTDLLA ELRMAQKEKD ENSTTRP00000010017/1-1402 QSLFSELAAL KEQMHKSRFL SQVVEDSEPT RNENFTDLLA ELRVAQKEKN ENSBTAP00000004386/1-1402 QSLFSELAAL KEQMHRSRFL SQAVEDSEPT KNQNFTDLLA ELRAAQKEKN bmy_18367T0/1-1371 QSLFSELAAL KEQMHKSRFL SQVVEDSEPT RNQNFTDLLA ELRVAQKEKN BACU016904/1-1405 QSLFSELAAL KEQMHKSRFL SQVVEDSEPT RNQNFTDLLA ELRVAQKEKN 801 850 ENSP00000385215/1-1403 SLLEDIKRLK QDKQALEVDF EKMKKERDQA KDQIAYVTGE KLYEIKILEE ENSTTRP00000010017/1-1402 SLLEDIRRLK QDKQALEVDL EKVKKERDQA KDQIAYATXX XXXXXXXXXX ENSBTAP00000004386/1-1402 SLLEDIKRLK QDKQALEVDL EKVKKERDQA KDQIAYATGE KLYEIKIIEE bmy_18367T0/1-1371 SLLEDIKRLK QDKQALEVDL EKVKKERDQA KDQIAYATGE KLYEIKILEE BACU016904/1-1405 SLLEDIKRLK QDKQALEVDL EKVKKERDQA KDQIAYATGE KLYEIKILEE 851 900 ENSP00000385215/1-1403 THKQEISRLQ KRLQWYAENQ ELLDKDALRL REANEEIEKL KLEIEKLKAE ENSTTRP00000010017/1-1402 XXXXXXXXXX KRLQWYAENQ ELLDKDAVRL KEANEEIEKL KLEVEKLKAE ENSBTAP00000004386/1-1402 THKQEISRLQ KRLQWYAENQ ELLDKDAVRL KEANEEIEKL KLEVEKLKAE bmy_18367T0/1-1371 THKQEITRLQ KRLQWYAENQ ELLDKDAVRL KEANEEIEKL KLEVEKLKAE BACU016904/1-1405 THKQEISRLQ KRLQWYAENQ ELLDKDAVRL KEANEEIEKL KLEVEKLKAE 901 950 ENSP00000385215/1-1403 SGNPSIRQKI RLKDKAADAK KIQDLERQVK EMEGILKRRY PNSLPALILA ENSTTRP00000010017/1-1402 SGNPSIQQKI RLKEKATDAK KIQDLERQVK EMEGILKRRY PNSLPALILA ENSBTAP00000004386/1-1402 SGNPSIQQKI RLKEKAADTK RIQDLERQVK EMEGILKRRY PNSLPALILA bmy_18367T0/1-1371 SGNPSIQQKI RLKEKATDAK KIQDLERQVK EMEGILKRRY PNSLPALILA BACU016904/1-1405 SGNPSIQQKI RLKEKATDAK KIQDLERQVK EMEGILKRRY PNSLPALILA 951 1000 ENSP00000385215/1-1403 ASAAGDTVDK NTVEFMEKRI KKLEADLEGK DEDAKKSLRT MEQQFQKMKI ENSTTRP00000010017/1-1402 ASAAGDTVDR NTVEFMEKRI KKLEADLEGK DEEAKKSLRT MEQQFQKMKI ENSBTAP00000004386/1-1402 ASAAGDTADR NTVEFMEKRI KKLEADLEGR DEEAKKSLRT MEQQFQKMKI bmy_18367T0/1-1371 ASAAGDTVDR NTVEFMEKRI KKLEADLEGR DEEAKKSLRT MEQQFQKMKI BACU016904/1-1405 ASAAGDTVDR NTVEFMEKRI KKLEADLEGK DEEAKKSLRT MEQQFQKMKI 1001 1050 ENSP00000385215/1-1403 QYEQRLEQQE QLLACKL--- --NQHD-SPR IKALEKELDD IKEAHQITVR ENSTTRP00000010017/1-1402 QYEQRLDEQE QLLACKLKEA SQNQHDSSSR VKALEKELDD VKEAHQITVG ENSBTAP00000004386/1-1402 QYEQRLEEQE QLLACKLKEA AQNQQDNSSR TKALEKELDD VKEAHQITIR bmy_18367T0/1-1371 QYEQRLAEQE QLLACKLKEA SQSQQDSSSR AKALEKELDD LKEAHQITVR BACU016904/1-1405 QYEQRLDEQE QLLACKLKEA SQSQHDSSSR VKALEKDLDD LKEAHQITVR 1051 1100 ENSP00000385215/1-1403 NLEAEIDVLK HQNAELDVKK NDKDDEDFQS IEFQVEQAHA KAKLVRLNEE ENSTTRP00000010017/1-1402 NLEAEIDVLK HQNAEWELKK DDKDDQDFQS IEFQVEQAHS KAKLVRLNEE ENSBTAP00000004386/1-1402 NLEAEIDVLK HQNAELELRK TEKDDKDFQS IEFQVEQAHS KAKLVRLNEE bmy_18367T0/1-1371 SLEAEIDVLK HQNAELELKK NDKDDKDFQS IEFQVEQAHS KAKLVRLNEE BACU016904/1-1405 NLEAEVDVLK HQNAELELKK NDKDDKDFQS VEFQVEQAHS KAKLVRLNEE 1101 1150 ENSP00000385215/1-1403 LAAKKREIQD LSKTVERLQK DRRMMLSNQN SKGREEMSAK RAKKDVLHSS ENSTTRP00000010017/1-1402 LAAKGREIQD LSQTVERLQK ERRKMLSNQH SKAREEMTAK RVKKHVLHPG ENSBTAP00000004386/1-1402 LAAKGREIQD LSKTVERLQK ERRKMLSNQQ SKAREEMTAK RVKKDGLHPG bmy_18367T0/1-1371 LAAKGREIQD LSKTVERLQK ERRKMLSNQH SKAREEMTAR RVKKDVLHPG BACU016904/1-1405 LAAKGREIQD LSKTVERLQK ERRKMLSNQH SKAREEMTAR RVKKDVLHPG 1151 1200 ENSP00000385215/1-1403 KGNANSFPGT LDSKLYQPHT FTDSHVSEVL QENYRLKNEL EGLISEKNEL ENSTTRP00000010017/1-1402 KRNANSS-GT LEGKLYQPHT FTDSDISEVV QENCRLKNEL ERLTVERNEL ENSBTAP00000004386/1-1402 KGNADSF-GT LEGKLYQPHT FTDSHVSEVL QENCRLKNEV ARLTVEGNEL bmy_18367T0/1-1371 KRNANSC-GT LEGKLYQPHT FTDSDISEVV QENSRLKNEL ERLTVERNEL BACU016904/1-1405 KRNANSS-GT LEGKLYQPHT FTDSDISEVV EENCRLKNEL ERLTVERNEL 1201 1250 ENSP00000385215/1-1403 KMKSEAVMNQ FENSMRRVKE DTAAHIASLK ASHQREIEKL LCQNAVENSS ENSTTRP00000010017/1-1402 KMKSEVAVNQ FENSMKRFKE ETAAHITSLK ASHEREVEKL LCQNAVENSS ENSBTAP00000004386/1-1402 KMKSEAAVNQ FENTMKRFKE ETAAHITSLK ASHQREVEKL LCQNAVENSS bmy_18367T0/1-1371 KMKSEVAVNQ FENSMKRFKE ETAAHITSLK ASHEREVEKL LCQNAVENSA BACU016904/1-1405 KMKSEVAVNQ FENSMKRFKE ETAAHITSLK ASHEREVEKL LCQNTVENSA 1251 1300 ENSP00000385215/1-1403 SKVAELNRKI ATQEVLIRHF QSQVNELQSK QESLVVSEVR EEILQKEITK ENSTTRP00000010017/1-1402 SKVAELNRKI ATQEVLIKHF QNQVNELQGK QESLVVSHVR EEILQKEITK ENSBTAP00000004386/1-1402 SKVAELNRKI ATQEVLIKHF QNQVNELQSK QESLVVSQVR EEILQKEITK bmy_18367T0/1-1371 SKVAELNRKI ATQEVLIKHF QNQVNELQGK QESLVVSHVR EEILQKEITK BACU016904/1-1405 SKVAELNRKI ATQEVLIKHF QNQVNELQGK QESLVVSHVR EEILQKEITK 1301 1350 ENSP00000385215/1-1403 LLEELREAKE NHTPEMKHFV GLEKKIKQME MRHAQREQEL QQIIQQTHQV ENSTTRP00000010017/1-1402 LLEELREAKE NHTPEMKHFM VLEKKIKQME MRHEQREQEL QQIIQQTHQV ENSBTAP00000004386/1-1402 LLEELREAKE NHTPEMKHFM VLEKKIKQME MRHEQREQEL QQIIQQTHQV bmy_18367T0/1-1371 LLEELREAKE NHTPEMKHFM VLEKKIKQME MRHEQREQEL QQFFTFKYLL BACU016904/1-1405 LLEELREAKE NHTPEMKHFM VLEKKIKQME MRHEQREQEL QQIIQQTHQV 1351 1400 ENSP00000385215/1-1403 VETEQNKEVE KWKRLAQLKN RELEKFRTEL DSILDVLREL HRQGVVVPVA ENSTTRP00000010017/1-1402 VETEQNKEIE KWKRLAQLKN RELDKFRTEL DSILDVLREL HRQGLVMPVA ENSBTAP00000004386/1-1402 VETEQNREIE KWKRLAQLKN RELDKFRTEL DSILDVLREL HRQGVVVPVA bmy_18367T0/1-1371 FAIV------ ----LSSLEN YFLKYFHCIL ---------- ----ILLKIN BACU016904/1-1405 VETEQNKEIE KWKRLAQLKN RELDKFRTEL DSILDVLREL HRQGVVMPVA 1401 1450 ENSP00000385215/1-1403 FADEMNAPEY - ENSTTRP00000010017/1-1402 LAEEVKAPEH Y ENSBTAP00000004386/1-1402 LA-EVNAPEY - bmy_18367T0/1-1371 V--------- - BACU016904/1-1405 LAEEVNAPEY Y