KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:23:52 2014  Check: 00 ..

 Name: ENSP00000322181/1-84      Len:    128  Check:  5366  Weight:  1.00
 Name: ENSBTAP00000004393/1-84   Len:    128  Check:  4546  Weight:  1.00
 Name: bmy_04074T0/1-96          Len:    128  Check:  9336  Weight:  1.00
 Name: ENSTTRP00000015614/1-123  Len:    128  Check:  9722  Weight:  1.00

//


                          1                                                   50
ENSP00000322181/1-84      MATGTDQVVG LGLVAVSLII FTYYTAWVIL LPFIDSQHVI HKYFLPRAYA 
ENSBTAP00000004393/1-84   MATGTDQVVG LGLVALSLII FTYYTAWVIL LPFIDSQHVI HKYFLPRAYA 
bmy_04074T0/1-96          -ATGTDQVVG LGLVAVSLII FTYYTVWVIL LPFIDSQHVI HKYFLPQAYA 
ENSTTRP00000015614/1-123  MATGTDQVVG LGLVAVSLII FTYYTVWVIL LPFIDSQHVI HKYFLPQAYA 


                          51                                                 100
ENSP00000322181/1-84      VAIPLAAGLL LLLFV----- G--------- ------LFIS YVMLKTKRVT 
ENSBTAP00000004393/1-84   IAIPLAAGLL LLLFV----- G--------- ------IFIT YVMLKNQNDT 
bmy_04074T0/1-96          VAIPLAAGLL LLLFVVPPTL G-SVSEGPHD PLPALNMLLH FVTGCTSP-- 
ENSTTRP00000015614/1-123  VAIPLAAGLL LLLFV----- GKSPNPGQCV GTPSLNMLLH FVTGRMSPGS 


                          101                                                150
ENSP00000322181/1-84      KKAQ------ ---------- -------- 
ENSBTAP00000004393/1-84   KKTQ------ ---------- -------- 
bmy_04074T0/1-96          ---------- ---------- -------- 
ENSTTRP00000015614/1-123  LPPTHPWGFP VHPSGLVSSR CPRLTGLW