KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:55 2014 Check: 00 .. Name: ENSP00000360626/1-513 Len: 514 Check: 2041 Weight: 1.00 Name: ENSBTAP00000004406/1-514 Len: 514 Check: 5643 Weight: 1.00 Name: BACU011324/1-514 Len: 514 Check: 4535 Weight: 1.00 Name: bmy_02948T0/1-489 Len: 514 Check: 2147 Weight: 1.00 Name: ENSTTRP00000010081/1-514 Len: 514 Check: 4298 Weight: 1.00 // 1 50 ENSP00000360626/1-513 MTLLPGDNSD YDYSALSCTS DASFHPAFLP QRQAIKGAFY RRAQRLRPQD ENSBTAP00000004406/1-514 MTLLPGDNSD YDYSALSCTS DASFHPAFFP QSQSLKGVFY RRAQRLRPQD BACU011324/1-514 MTLLPGDNSD YDYSALSCAS DASFHPAFFP QSQSLKGVFY RRAQRLRPQD bmy_02948T0/1-489 MTLLPGDNSD YDYSALSCAS DASFHPAFFP QSQSLKGVFY RRAQRLRPQD ENSTTRP00000010081/1-514 MTLLPGDNSD YDYSALSCAS DASFHPAFFP QSQSLKGVFY RRAQRLRPQD 51 100 ENSP00000360626/1-513 EPRQGCQPED RRRRIIINVG GIKYSLPWTT LDEFPLTRLG QLKACTNFDD ENSBTAP00000004406/1-514 EPRQGGQPED RRRQIIINVG GIKYSLPWTT LEEFPLTRLG QLKACTNFDD BACU011324/1-514 EPRQGGQPED RRRQIIINVG GIKYSLPWTT LEEFPLTRLG QLKACTNFDD bmy_02948T0/1-489 EPRQGGQPED RRRQIIINVG GIKYSLPWTT LEEFPLTRLG QLKACTNFDD ENSTTRP00000010081/1-514 EPRQGGQPED RRRQIIINVG GIKYSLPWTT LEEFPLTRLG QLKACTNFDD 101 150 ENSP00000360626/1-513 ILNVCDDYDV TCNEFFFDRN PGAFGTILTF LRAGKLRLLR EMCALSFQEE ENSBTAP00000004406/1-514 ILNVCDDYDV TCNEFFFDRN PGAFGTILTF LRAGKLRLLR EMCALSFQEE BACU011324/1-514 ILNVCDDYDV TCNEFFFDRN PGAFGTILTF LRAGKLRLLR EMCALSFQEE bmy_02948T0/1-489 ILNVCDDYDV TCNEFFFDRN PGAFGTILTF LRAGKLRLLR EMCALSFQEE ENSTTRP00000010081/1-514 ILNVCDDYDV TCNEFFFDRN PGAFGTILTF LRAGKLRLLR EMCALSFQEE 151 200 ENSP00000360626/1-513 LLYWGIAEDH LDGCCKRRYL QKIEEFAEMV EREEEDDALD SEGRDSEGPA ENSBTAP00000004406/1-514 LLYWGIAEDH LDGCCKRRYL QKIQEFAETV EREDEEDALD SEDPDSEGPA BACU011324/1-514 LLYWGIAEDH LDGCCKRRYL QKIEEFAEMV EREDEDDPLD SEDHDSEGPS bmy_02948T0/1-489 LLYWGIAEDH LDGCCKRRYL QKIEEFAEMV EREDEDDPLD SEDHDSEGPT ENSTTRP00000010081/1-514 LLYWGIAEDH LDGCCKRRYL QKIEEFAEMV EREDEDDPLD SEDHDSEGPT 201 250 ENSP00000360626/1-513 EGEGRLGRCM RRLRDMVERP HSGLPGKVFA CLSVLFVTVT AVNLSVSTLP ENSBTAP00000004406/1-514 EEEGRLGRCM RRLRDMVERP HSGLPGKVFA FLSVLFVTVT AVNLSISTLP BACU011324/1-514 EGEGRLGRCM RRLRDMVERP HSGLPGKVFA CLSVLFVTVT AVNLSISTLP bmy_02948T0/1-489 EGEGRLGRCM RRLRDMVERP HSGLPGKVFA CLS------- ---------- ENSTTRP00000010081/1-514 EGEGRLGRCM RRLRDMVERP HSGLPGKVFA CLSVLFVTVT AVNLSISTLP 251 300 ENSP00000360626/1-513 SLREEEEQGH CSQMCHNVFI VESVCVGWFS LEFLLRLIQA PSKFAFLRSP ENSBTAP00000004406/1-514 SLREEEEQGR CSQMCRNIFI VESVCVGWFS LEFLLRLIQA PNKFVFLRSP BACU011324/1-514 SLREEEEKGQ CSQMCYNIFI VESVCVGWFS LEFLLRLIQA PSKFAFLRSP bmy_02948T0/1-489 --------GQ CSQMCHNIFI VESVCVGWFS LEFLLRLIQA PSKFAFLRSP ENSTTRP00000010081/1-514 SLREEEEKGQ CSQMCRNIFI VESVCVGWFS LEFLLRLIQA PSKFAFLRSP 301 350 ENSP00000360626/1-513 LTLIDLVAIL PYYITLLVDG AAAGRRKPGA GNSYLDKVGL VLRVLRALRI ENSBTAP00000004406/1-514 LTLIDMVAIL PYYVTLLVDG ASAGRRKPGT GNSYLDKVGL VLRVLRALRI BACU011324/1-514 LTLIDMVAIL PYYITLLVDG AAADRRKPGT GNSYLDKVGL VLRVLRALRI bmy_02948T0/1-489 LTLIDMVAIL PYYITLLVDG AAADRRKPGT GNSYLDKVGL VLRVLRALRI ENSTTRP00000010081/1-514 LTLIDMVAIL PYYITLLVDG AAADRRKPGT GNSYLDKVGL VLRVLRALRI 351 400 ENSP00000360626/1-513 LYVMRLARHS LGLQTLGLTA RRCTREFGLL LLFLCVAIAL FAPLLYVIEN ENSBTAP00000004406/1-514 LYVMRLARHS LGLQTLGLTA RRCTREFGLL LLFLCVAIAL FAPLLYVIEN BACU011324/1-514 LYVMRLARHS LGLQTLGLTA RRCTREFGLL LLFLCVAIAL FAPLLYVIEN bmy_02948T0/1-489 LYVMRLARHS LGLQTLGLTA RRCTREFGLL LLFLCVAIAL FAPLLYVIEN ENSTTRP00000010081/1-514 LYVMRLARHS LGLQTLGLTA RRCTREFGLL LLFLCVAIAL FAPLLYVIEN 401 450 ENSP00000360626/1-513 EMADSPEFTS IPACYWWAVI TMTTVGYGDM VPRSTPGQVV ALSSILSGIL ENSBTAP00000004406/1-514 EMAESPEFTS IPACYWWAVI TMTTVGYGDM VPRSTPGQVV ALSSILSGIL BACU011324/1-514 EMADSPEFTS IPACYWWAVI TMTTVGYGDM VPRSTPGQVV ALSSILSGIL bmy_02948T0/1-489 EMADSPEFTS IPACYWWAVI TMTTVGYGDM VPRSTPGQVV ALSSILSGIL ENSTTRP00000010081/1-514 EMADSPEFTS IPACYWWAVI TMTTVGYGDM VPRSTPGQVV ALSSILSGIL 451 500 ENSP00000360626/1-513 LMAFPVTSIF HTFSRSYLEL KQEQERVMFR RAQFLIKTKS QL-SVSQDSD ENSBTAP00000004406/1-514 LMAFPVTSIF HTFSRSYLEL KQEQERVMFR RTQFLIKTKS QLSSMSHDSD BACU011324/1-514 LMAFPVTSIF HTFSRSYLEL KQEQERVMFR RTQFLIKTKS QLSSMSHDSD bmy_02948T0/1-489 LMAFPVTSIF HTFSRSYLEL KQEQERVMFR RTQFLIKTKS QLSSMSHDSD ENSTTRP00000010081/1-514 LMAFPVTSIF HTFSRSYLEL KQEQERVMFR RTQFLIKTKS QLSSMSHDSD 501 550 ENSP00000360626/1-513 ILFGSASSDT RDNN ENSBTAP00000004406/1-514 ILFGSASSDT RDNN BACU011324/1-514 ILFGSASSDT RDNN bmy_02948T0/1-489 ILFGSASSDT RDNN ENSTTRP00000010081/1-514 ILFGSASSDT RDNN