KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:58 2014 Check: 00 .. Name: ENSTTRP00000015267/1-118 Len: 194 Check: 5445 Weight: 1.00 Name: BACU016845/1-161 Len: 194 Check: 7580 Weight: 1.00 Name: ENSP00000222547/1-118 Len: 194 Check: 3776 Weight: 1.00 Name: bmy_06980T0/1-191 Len: 194 Check: 3897 Weight: 1.00 Name: ENSBTAP00000004440/1-118 Len: 194 Check: 4641 Weight: 1.00 // 1 50 ENSTTRP00000015267/1-118 --RIVL---- ---------- ---------- ---------- ---------- BACU016845/1-161 MRRAGLGKKR TESLSSGALE LAVLGAGTRK EIGSVSCHWN LNQRAGCMEG ENSP00000222547/1-118 MRRAGL---- ---------- ---------- ---------- ---------- bmy_06980T0/1-191 MRRAGLGKKR TEILSSGALE LAVLGAGTRK EIGSVSCLWN LNQRAGCMEG ENSBTAP00000004440/1-118 MRRAGL---- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015267/1-118 ---------- ---------- ---------S EGVPPGNYGN YGYPNSGYSA BACU016845/1-161 SLGAVPSGNT PFVRDPGAFL KFSSVP---G EGVPPGNYGN YGYPNSGYSA ENSP00000222547/1-118 ---------- ---------- ---------G EGVPPGNYGN YGYANSGYSA bmy_06980T0/1-191 SLEAVPSGNT PFVRDPGAFL KFSSVPGVDG EGVPPGNYGN YGYPNSGYSA ENSBTAP00000004440/1-118 ---------- ---------- ---------G EGVPPGNYGN YGYPNSGYSA 101 150 ENSTTRP00000015267/1-118 CEEENERLTE SLRNKVTAIK SLSIEIGHEV KHQNKLLAEM DSQFDSTTGF BACU016845/1-161 CEEENERLTE SLRNKVTAIK SLSIEIGHEV KHQNKLLAEM DSEFDSTTGF ENSP00000222547/1-118 CEEENERLTE SLRSKVTAIK SLSIEIGHEV KTQNKLLAEM DSQFDSTTGF bmy_06980T0/1-191 CEEENERLTE SLRNKVTAIK SLSIEIGHEV KHQNKLLAEM DSEFDSTTGF ENSBTAP00000004440/1-118 CEEENERLTE SLRNKVTAIK SLSIEIGHEV KHQNKLLAEM DSQFDSTTGF 151 200 ENSTTRP00000015267/1-118 LVDHSVPTND -NSGSLSSIP CHLSRSLKGN RLPFSPIYHS YIRK BACU016845/1-161 LDQ------- ---------V CFS---PLGN KDG------- ---- ENSP00000222547/1-118 LGKTMGKLKI LSRGSQTKLL CYM---MLFS LFVFFIIYWI IKLR bmy_06980T0/1-191 LGKTMGKLKI LSRGSQTKLL CYM---MLFS LFVFFVIYWI IKLR ENSBTAP00000004440/1-118 LGKTMGKLKL LSRGSQTKLL CYM---MLFS LFVFFVIYWI IKLR