KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:59 2014 Check: 00 .. Name: ENSP00000325677/1-1001 Len: 1039 Check: 7847 Weight: 1.00 Name: ENSBTAP00000004443/1-1001 Len: 1039 Check: 7773 Weight: 1.00 Name: bmy_00740T0/1-1036 Len: 1039 Check: 7341 Weight: 1.00 Name: ENSTTRP00000012468/1-1002 Len: 1039 Check: 5224 Weight: 1.00 Name: BACU011941/1-1001 Len: 1039 Check: 3912 Weight: 1.00 // 1 50 ENSP00000325677/1-1001 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK ENSBTAP00000004443/1-1001 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK bmy_00740T0/1-1036 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK ENSTTRP00000012468/1-1002 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK BACU011941/1-1001 MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK 51 100 ENSP00000325677/1-1001 VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ ENSBTAP00000004443/1-1001 VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ bmy_00740T0/1-1036 VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ ENSTTRP00000012468/1-1002 VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ BACU011941/1-1001 VLQFKNKKLA ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ 101 150 ENSP00000325677/1-1001 LDETVEALLR CHESQGELSS APEAPGTQEG PTCDGTPLPE PGTSELRDPL ENSBTAP00000004443/1-1001 LDETVEALLR HHESQGELSS GTEAPGTQEG PTRDETPLTE PGTSELREPL bmy_00740T0/1-1036 LDETVEALLR HHESQGELSS GTEAPGTQEG PTRDETPLTE PGTSELREPL ENSTTRP00000012468/1-1002 LDETVEALLR HHESQGELSS GTEAPGTQEG PTRDETPLTE PGTSELREPL BACU011941/1-1001 LDETVEALLR HHENQGDLSS GTEAPGTQEG PTRDETPLTE PGTSELREPL 151 200 ENSP00000325677/1-1001 LMQLRPPLSE PALAFVVALG ASSSEEVELE LQGRMEFSKA AVSRVVEASD ENSBTAP00000004443/1-1001 PMQLRPPLSE PALAFVVALG ASSSEEVELQ LQGRMEFSKA AVSRVVEASD bmy_00740T0/1-1036 PMQLRPPLSE PALAFVVALG ASSSEEVELQ LQGRMEFSKA AVSRVVEASD ENSTTRP00000012468/1-1002 PMQLRPPLSE PALAFVVALG ASSSEEVELQ LQGRMEFSKA AVSRVVEASD BACU011941/1-1001 PMQLRPPLSE PALAFVVALG ASSSEEVELQ LQGRMEFSKA AVSRVVEASD 201 250 ENSP00000325677/1-1001 RLQRRVEELC QRVYSRGDSE PLSEAAQAHT RELGRENRRL QDLATQLQEK ENSBTAP00000004443/1-1001 RLQRRVEELC QRVYSRGDSE PPGEAARART RELGRENRRL QDLATQLQEK bmy_00740T0/1-1036 RLQRQVEELC QRVYSRGDSE PPSEAARART RELGRENRRL QDLATQLQEK ENSTTRP00000012468/1-1002 RLQRQVEELC QRVYSRGDSE PPSEAARART RELGRENRRL QDLATQLQEK BACU011941/1-1001 RLQRQVEELC QRVYSRGDSE PPSEAARART RELGRENRRL QDLATQLQEK 251 300 ENSP00000325677/1-1001 HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL ENSBTAP00000004443/1-1001 HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL bmy_00740T0/1-1036 HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL ENSTTRP00000012468/1-1002 HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL BACU011941/1-1001 HHRISLEYSE LQDKVTSAET KVLEMETTVE DLQWDIEKLR KREQKLNKHL 301 350 ENSP00000325677/1-1001 AEALEQLNSG YYVSGSSSGF QGGQITLSMQ KFEMLNAELE ENQELANSRM ENSBTAP00000004443/1-1001 AEALEQLNSG YYVSGSSSGF QGGQITLSMQ KFEMLNAELE ENQELANSRM bmy_00740T0/1-1036 AEALEQLNSG YYVSGSSSGF HGGQITLSMQ KFEMLNAELE ENQELANSRM ENSTTRP00000012468/1-1002 AEALEQLNSG YYVSGSSSGF QGGQITLSMQ -FEMLNAELE ENQELANSRM BACU011941/1-1001 AEALEQLNSG YYVSGSSSGF HGGQITLSMQ KFEMLNAELE ENQELANSCM 351 400 ENSP00000325677/1-1001 AELEKLQAEL QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN ENSBTAP00000004443/1-1001 AELEKLQAEL QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN bmy_00740T0/1-1036 AELEKLQAEL QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN ENSTTRP00000012468/1-1002 AELEKLQAEL QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN BACU011941/1-1001 AELEKLQAEL QGAVRTNERL KVALRSLPEE VVRETGEYRM LQAQFSLLYN 401 450 ENSP00000325677/1-1001 ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELGLQKK LRTEVIQLED ENSBTAP00000004443/1-1001 ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELGLQKK LRTEVIQLED bmy_00740T0/1-1036 ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELGLQKK LRTEVIQLED ENSTTRP00000012468/1-1002 ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELGLQKK LRTEVIQLED BACU011941/1-1001 ESLQVKTQLD EARGLLLATK NSHLRHIEHM ESDELGLQKK LRTEVIQLED 451 500 ENSP00000325677/1-1001 TLAQVRKEYE MLRIE----- ---------- ---------- ---------- ENSBTAP00000004443/1-1001 TLAQVRKEYE MLRIE----- ---------- ---------- ---------- bmy_00740T0/1-1036 TLAQVRKEYE MLRIESHTLH KASVVIFFVL RVMALVLPLP PLRGWAPNPG ENSTTRP00000012468/1-1002 TLAQVRKEYE MLRIE----- ---------- ---------- ---------- BACU011941/1-1001 TLAQVRKEYE MLRIE----- ---------- ---------- ---------- 501 550 ENSP00000325677/1-1001 FEQNLAANEQ AGPINREMRH LISSLQNHNH QLKGDAQRYK RKLREVQAEI ENSBTAP00000004443/1-1001 FEQNLAANEQ AGPINREMRH LISSLQNHNH QLKGDAQRYK RKLREVQAEI bmy_00740T0/1-1036 TSPALVSCTL PGPINREMRH LISSLQNHNH QLKGDAQRYK RKLREVQAEI ENSTTRP00000012468/1-1002 FEQNLAANEQ AGPINREMRH LISSLQNHNH QLKGDAQRYK RKLREVQAEI BACU011941/1-1001 FEQNLAANEQ AGPINREMRH LISSLQNHNH QLKGDAQRYK RKLREVQAEI 551 600 ENSP00000325677/1-1001 GKLRAQASGS AHSTPNLGHP EDSGVSAPAP GKEEGGPGPV STPDNRKEMA ENSBTAP00000004443/1-1001 AKLRAQASGS THSIPSLGHP EDSSLSAPVP GKEEGGPGPV GAPDTRKEMA bmy_00740T0/1-1036 AKLRAQASGS THSIPTLGHP EDSGLSAPAP GKEEGGPGPV GAPDARKEMA ENSTTRP00000012468/1-1002 AKLRAQASGS THSIPTLGHP EDSGLSAPAP GKEEGGPGPV GAPDARKEMA BACU011941/1-1001 AKLRAQASGS THSIPTLGHP EDSGLSAPAA GKEEGGPGPV GAPDARKEMA 601 650 ENSP00000325677/1-1001 PVPGTTTTTT SVKKEELVPS EEDFQGITPG AQGPSSRGRE PEARPK---R ENSBTAP00000004443/1-1001 SMPGAALTTS SAKKEDVVAS EEETQALTPG AQGPSSRGRE LEARPK---R bmy_00740T0/1-1036 SMPGAAITIS LVKKEDLVPS EEEAQALTPG AQGPSSRGRE PEAKPK---R ENSTTRP00000012468/1-1002 SMPGAAITTS LVKKEDLVPS EEEAQALTPG AQGPSSRARE PEAKPKRELR BACU011941/1-1001 SMPGAAITTS LVKKEDLVPS EEEAQALTPG AQGPSSRGRE PEAKPK---R 651 700 ENSP00000325677/1-1001 ELQEREGPSL GPPPVASALS RADREKAKVE ETKRKESELL KGLRAELKKA ENSBTAP00000004443/1-1001 ELREREGPVL GPPSVASALS RADREKAKVE EVKRKESELL KGLRVELKKA bmy_00740T0/1-1036 ELREREGPGL GPPSVASALS RTDREKVKVE EAKRKESELL KGLRAELKKA ENSTTRP00000012468/1-1002 ELREREGPGL GPPSVVSALS RTDREKVKVE EAKRKESELL KGLRAELKKA BACU011941/1-1001 ELREREGPGL GPPSVASALS RTDREKVKVE EAKRKESELL KGLRAELKKA 701 750 ENSP00000325677/1-1001 QESQKEMKLL LDMYKSAPKE QRDKVQLMAA ERKAKAEVDE LRSRIRELEE ENSBTAP00000004443/1-1001 QESQKEMKLL LDMYKSAPKE QRDKVQLMAA ERKAKAEVDE LRGRIRELEE bmy_00740T0/1-1036 QESQKEMKLL LDMYKSAPKE QRDKVQLMAA ERKAKAEVDE LRSRIRELEE ENSTTRP00000012468/1-1002 QESQKEMKLL LDMYKSAPKE QRDKVQLMAA ERKAKAEVDE LRSRIRELEE BACU011941/1-1001 QESQKEMKLL LDMYKSAPKE QRDKVQLMAA ERKAKAEVDE LRSRIRELEE 751 800 ENSP00000325677/1-1001 RDRRESKKIA DEDALRRIRQ AEEQIEHLQR KLGATKQEEE ALLSEMDVTG ENSBTAP00000004443/1-1001 RDRRESKKIA DEDALRRIRQ AEEQIEHLQR KLGATKQEEE ALLSEMDVTG bmy_00740T0/1-1036 RDRRESKKIA DEDALRRIRQ AEEQIEHLQR KLGATKQEEE ALLSEMDVTG ENSTTRP00000012468/1-1002 RDRRESKKIA DEDALRRIRQ AEEQIEHLQR KLGATKQEEE ALLSEMDVTG BACU011941/1-1001 RDRRESKKIA DEDALRRIRQ AEEQIEHLQR KLGATKQEEE ALLSEMDVTG 801 850 ENSP00000325677/1-1001 QAFEDMQEQN GRLLQQLREK DDANFKLMSE RIKANQIHKL LREEKDELGE ENSBTAP00000004443/1-1001 QAFEDMQEQN GRLLQQLREK DDANFKLMSE RIKANQIHKL LREEKDELGE bmy_00740T0/1-1036 QAFEDMQEQN GRLLQQLREK DDANFKLMSE RIKANQIHKL LREEKDELGE ENSTTRP00000012468/1-1002 QAFEDMQEQN GRLLQQLREK DDANFKLMSE RIKA-HIHKL LREEKDELGE BACU011941/1-1001 QAFEDMQEQN GRLLQQLREK DDANFKLMSE RIKANQIHKL LREEKDELGE 851 900 ENSP00000325677/1-1001 QVLGLKSQVD AQLLTVQKLE EKERALQGSL GGVEKELTLR SQALELNKRK ENSBTAP00000004443/1-1001 QVLGLKSQVD AQLLTVQKLE EKERALQGSL GGVEKELTLR SQALELNKRK bmy_00740T0/1-1036 QVLGLKSQVD AQLLTVQKLE EKERALQGSL GGVEKELTLR SQALELNKRK ENSTTRP00000012468/1-1002 QVLGLKSQVD AQLLTVQKLE EKERALQGSL GGVEKELTLR SQALELNKRK BACU011941/1-1001 QVLGLKSQVD AQLLTVQKLE EKERALQGSL GGVEKELTLR SQALELNKRK 901 950 ENSP00000325677/1-1001 AVEAAQLAED LKVQLEHVQT RLREIQPCLA ESRAAREKES FNLKRAQEDI ENSBTAP00000004443/1-1001 AVEAAQLAED LKVQLEHVQT RLREIQPCLA ESRAAREKES FNLKRAQEDI bmy_00740T0/1-1036 AVEAAQLAED LKVQLEHVQT RLREIQPCLA ESRAAREKES FNLKRAQEDI ENSTTRP00000012468/1-1002 AVEAAQLAED LKVQLEHVQT RLREIQPCLA ESRAAREKES FNLKRAQEDI BACU011941/1-1001 AVEAAQLAED LKVQLEHVQT RLREIQPCLA ESRAAREKES FNLKRAQEDI 951 1000 ENSP00000325677/1-1001 SRLRRKLEKQ RKVEVYADAD EILQEEIKEY KARLTCPCCN TRKKDAVLTK ENSBTAP00000004443/1-1001 SRLRRKLEKQ RKVEVYADAD EILQEEIKEY KARLTCPCCN TRKKDAVLTK bmy_00740T0/1-1036 SRLRRKLEKQ RKVEVYADAD EILQEEIKEY KARLTCPCCN TRKKDAVLTK ENSTTRP00000012468/1-1002 SRLRRKLEKQ RKVEVYADAD EILQEEIKEY KARLTCPCCN TRKKDAVLTK BACU011941/1-1001 SRLRRKLEKQ RKVEVYADAD EILQEEIKEY KARLTCPCCN TRKKDAVLTK 1001 1050 ENSP00000325677/1-1001 CFHVFCFECV RGRYEARQRK CPKCNAAFGA HDFHRIYIS ENSBTAP00000004443/1-1001 CFHVFCFECV RGRYEARQRK CPKCNAAFGA HDFHRVYIS bmy_00740T0/1-1036 CFHVFCFECV RGRYEARQRK CPKCNAAFGA HDFHRVYIS ENSTTRP00000012468/1-1002 CFHVFCFECV RGRYEARQRK CPKCNAAFGA HDFHRVYIS BACU011941/1-1001 CFHVFCFECV RGRYEARQRK CPKCNAAFGA HDFHRVYIS