KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:03 2014 Check: 00 .. Name: ENSBTAP00000004487/1-374 Len: 386 Check: 2703 Weight: 1.00 Name: ENSTTRP00000011036/1-380 Len: 386 Check: 8746 Weight: 1.00 Name: bmy_10317T0/1-224 Len: 386 Check: 8387 Weight: 1.00 Name: BACU002336/1-218 Len: 386 Check: 4792 Weight: 1.00 // 1 50 ENSBTAP00000004487/1-374 MPRLSQDNQQ GHQKHFSRPS RRIQFLPPPW TEAYNVNVHQ TVENEGCATA ENSTTRP00000011036/1-380 MPRLSPDNQE ELQKHFSRPS MPIQFLLPPR AEEYNANIHQ TVENEGGTIA bmy_10317T0/1-224 ---------- ---------- ---------- ---------- ---------- BACU002336/1-218 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000004487/1-374 MHNVK----- -LLGSPAAPT LLSLLSGTLS GFARFFALLL RRPPPEAPLR ENSTTRP00000011036/1-380 RHNVKPCPPA QLPGSPAAPK LLGFLSGTLS GLARFFAHLL QRPLPGAPLR bmy_10317T0/1-224 ---------- ---------- ---------- ---------- ---------- BACU002336/1-218 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000004487/1-374 RRDFSALIPA LPAAVLSPGH EERPGRLSLL LRAALALPGR PPGGRLPREV ENSTTRP00000011036/1-380 RPDFSLLLPV LPAAGLAPRQ EERPGRLSLL LRAALALPGR PPGGRLPREE bmy_10317T0/1-224 ---------- ---------- ---------- ---------- ---------- BACU002336/1-218 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000004487/1-374 DASAGQSSSI PPMGSEWMEM RKRPVCAAQE PTACAPGQPG VENQGSNACC ENSTTRP00000011036/1-380 DAGAGQSPPR PPMGSERVEM RKRQVCAAQG PAAAAPGPRG VGNRGPNACC bmy_10317T0/1-224 ---------- --MRSERMEM RKRQVCAAQG PAAPAPGQHG VGNRGSNACC BACU002336/1-218 ---------- --MGSERMEM RKRQVCAVQG PAASAPGQHG VGNRGSNACC 201 250 ENSBTAP00000004487/1-374 FCWCCCCSCS CLTVRNQEEQ RLRRTSYEAR TEDLPTCEES PGPTLEEASA ENSTTRP00000011036/1-380 FCWCCCCSCS CLTVRNQEEQ RLRSASYELR TEDLPICEES PGPSLEEASA bmy_10317T0/1-224 FCWCCCCSCS CLTVRNQEEQ RLRSASYELR TEDLPTCEES PAPTLEEASA BACU002336/1-218 FCWCCCCSCS CLTVRNQEEQ RLRSTSYELR TEDLPTCEES PAPALEEASA 251 300 ENSBTAP00000004487/1-374 WAQSFDKLML TPAGRNAFRE FLRTEFSEEN MLFWMACEEL KKEANKATIE ENSTTRP00000011036/1-380 WAQSFDKLML TPAGRNAFRE FLRTEFSEEN MLFWMACEEL KKEANKTTIE bmy_10317T0/1-224 WARSFDKLLL TPAGRNAFRE FLRTEFSEEN MLFWMACEEL KKEANRAMIE BACU002336/1-218 WAQSFDKLML TPAGRNAFRE FLRTEFSEEN MLFWMACEEL KKEANKAVIE 301 350 ENSBTAP00000004487/1-374 EKARIIYEDY ISILSPKE-- ----VSLDSR VRETINRSMA EPSRNIFDDA ENSTTRP00000011036/1-380 EKARIIYEDY VSILSPKE-- ----VSLDSR VRETINRSMA EPSPHIFDDA bmy_10317T0/1-224 EKARIIYEDY VSILSPKEMC PRRQVSLDSR VRETINRSMA EPSPHIFDDA BACU002336/1-218 EKARIIYEDY VSILSPKE-- ----VSLDSR VRETINRSMA EPSPHIFDDA 351 400 ENSBTAP00000004487/1-374 QLQIYTLMHR DSYPRFMNSA LYKDLLRSLS EKAVEA ENSTTRP00000011036/1-380 QLQIYTLMHR DSYPRFMNSA LYKDLLRSLS EKAVEA bmy_10317T0/1-224 QLQIYTLMHR DSYPRFMNSA LYKDLLRSLS EKAVEA BACU002336/1-218 QLQIYTLMHR DSYPRFMNSA LYKDLLRSLS EKAVEA