KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:07 2014 Check: 00 .. Name: ENSTTRP00000009598/1-418 Len: 1143 Check: 3970 Weight: 1.00 Name: ENSP00000365714/1-460 Len: 1143 Check: 6220 Weight: 1.00 Name: ENSBTAP00000004515/1-450 Len: 1143 Check: 1583 Weight: 1.00 Name: bmy_22196T0/1-323 Len: 1143 Check: 2952 Weight: 1.00 Name: BACU009064/1-1143 Len: 1143 Check: 626 Weight: 1.00 // 1 50 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- --ALLLVVAL ENSP00000365714/1-460 MGAPPGYRPS AWVHLLHQLP RADFQLRPVP SVFAPQEQEY QQALLLVAAL ENSBTAP00000004515/1-450 MGAPPGYRPS AWVHLLHQLP RADFQLRPVP SAFAPQEREY QQALLLVAAL bmy_22196T0/1-323 MGAPPGYRPS AWVHLLHQLP RADFQLRPVP SGFAPQEQEY QQALLLVVAL BACU009064/1-1143 MGAPPGYRPS AWVHLLHQLP RADFQLRPVP SGFAPQEQEY QQALLLVVAL 51 100 ENSTTRP00000009598/1-418 AGLGLGLSLI FIAVYLIRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000365714/1-460 AGLGLGLSLI FIAVYLIRFC CCRPPEPPGS KIPSPGGGCV TWSCIVALLA ENSBTAP00000004515/1-450 AGLGLGLSLI FIAVYLIRFC CCRPPEPPGA KSPPPGGGCV TWNCIAALLV bmy_22196T0/1-323 AGLGLGLSLI FIAVYLIRFC CCRPPEPPGA KSPPPGGGCV TWSCIAALLV BACU009064/1-1143 AGLGLGLSLI FIAVYLIRFC CCRPPEPPGA KSPPPGGGCV TWSCIAALLV 101 150 ENSTTRP00000009598/1-418 XXTGIGIGFY GNSETSDGVS QLSSALLHAN HTLTAIDHLV LEMVERLDEA ENSP00000365714/1-460 GCTGIGIGFY GNSETSDGVS QLSSALLHAN HTLSTIDHLV LETVERLGEA ENSBTAP00000004515/1-450 GCAGIGVGFY GNSETSDGVS QLSSALLHAN HTLTAIDHLV LEMVERLDEA bmy_22196T0/1-323 GCAGIGIGFY GNSETSDGVS QLSSALLHAN HTLTAIDHLV LEMVERLDEA BACU009064/1-1143 GCAGIGIGFY GNSETSDGVS QLSSALLHAN HTLTAIDHLV LEMVERLEEA 151 200 ENSTTRP00000009598/1-418 VRTELTTLEE VLTQRTELVA ATRGARRQAE AVAQQLQGLA FWQGVPLSPV ENSP00000365714/1-460 VRTELTTLEE VLEPRTELVA AARGARRQAE AAAQQLQGLA FWQGVPLSPL ENSBTAP00000004515/1-450 VRTELTTLEE VLTQRTELVA AARGARRQAE TVAQQLQGLA FWRGVPLSPL bmy_22196T0/1-323 VRTELTTLEE VLTQRTELVA ATRGARRQAE AVAQQLQGLA FWRGVPLSPL BACU009064/1-1143 VRTELTTLEE VLTQRTELVA ATRGARRQAE AVAQQLQGLA FWQGVPLSPL 201 250 ENSTTRP00000009598/1-418 QVAEDVSFVE EYRWLAYVLL LLLELLVCLF TLLGLAKQSK WLVIVMTVMS ENSP00000365714/1-460 QVAENVSFVE EYRWLAYVLL LLLELLVCLF TLLGLAKQSK WLVIVMTVMS ENSBTAP00000004515/1-450 QVAEDVSFVE EYRWLAYVLL LLLELLVCLF TLLGLARQSK WLVIVMTVMS bmy_22196T0/1-323 QVAEDV---- ---WLAYVLL LLLELLVCLF TLLGLAKQSK WLVIVMTVMS BACU009064/1-1143 QVAEDVSFVE EERWLAYVLL LLLELLVCLF TLLGLAKQSK WLVIVMTVVS 251 300 ENSTTRP00000009598/1-418 LLVLVLSWGS MGLEAATAVG LSDFCSSPDT YILNLTREET GLGS------ ENSP00000365714/1-460 LLVLVLSWGS MGLEAATAVG LSDFCSNPDP YVLNLTQEET GLSS------ ENSBTAP00000004515/1-450 LLVLVLSWGS MGLEAATAVG LSDFCSSPDS YILNLTQEET GLGS------ bmy_22196T0/1-323 LLVLVLSWGS MGLEAATAV- ---------- ---------- ---------- BACU009064/1-1143 LLVLVLSWGS MGLEAAAAVG LSDFCSSPDT YILNLTREET GLGSGDRISK 301 350 ENSTTRP00000009598/1-418 ---------- ------DILN YYFLCNQAVS NPFQQRLTVS QRALANIHSQ ENSP00000365714/1-460 ---------- ------DILS YYLLCNRAVS NPFQQRLTLS QRALANIHSQ ENSBTAP00000004515/1-450 ---------- ------DILN YYFLCNQAVS NPFQQRLTLS QRALANIHSQ bmy_22196T0/1-323 ---------- ---------- ---------- -----RLTLS QRALANIHSQ BACU009064/1-1143 RTPWVLGPLC AVLLGWDILS YYFLCNQAVS NPFQQRLTLS QRALANIHSQ 351 400 ENSTTRP00000009598/1-418 LQGLEREAVP QFPSAQKPLL SLEETLNVTE GNFHQLVALL HCRGLHKDYG ENSP00000365714/1-460 LLGLEREAVP QFPSAQKPLL SLEETLNVTE GNFHQLVALL HCRSLHKDYG ENSBTAP00000004515/1-450 LQGLEREAVP QFPSAQKPVL SLEETLNVTE GNFHQLVALL HCRGLHKDYG bmy_22196T0/1-323 LQGLERDAVP QFPSAQKPLL SLEETLNVTE GNFHQLVALL HCRGLH---- BACU009064/1-1143 LQGLEREAVP QFPSAQKLLL SLEETLNVTE GNFHQLVALL HCRGLHKDYG 401 450 ENSTTRP00000009598/1-418 AALRGLCEDA LEGLLYLLLF SLLSAGALAT ALCSLPRAWA LFPPRNPSAS ENSP00000365714/1-460 AALRGLCEDA LEGLLFLLLF SLLSAGALAT ALCSLPRAWA LFPPRNPSAL ENSBTAP00000004515/1-450 SALRGLCEDT LEGLLFLLLF SLLSAGALAT VLCSLPRAWA LFPPSDDYED bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 AALRGLCEDA LEGLLFLLLF SLLSAGALAT ALCSLPRAWA LFPPSDDYDD 451 500 ENSTTRP00000009598/1-418 CSGSHLSEPF ---------- ---------- ---------- ---------- ENSP00000365714/1-460 CSGSRLSEPL ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 TDDDDPFNPQ ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 TDDDDPFNPQ PDIGGLSGSA TCPPPQIYLL TPGPRTLLFC HSHLTPAVSP 501 550 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 RSSQYSMVAG AGRESGMETP MHENPEWEKA RQALASISKA GAAGSSAKAS 551 600 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 SSGPVSSAQY VSQAEASALQ QQQYYQWYQQ YNYAYPYSYY YPVSMYQSYG 601 650 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 SPSQYGMASS YGSAAPQQPS APQHQGTLSQ PPVPGMDEGL SYQAPPQQLP 651 700 ENSTTRP00000009598/1-418 ---------- ------LHAR LEPVPHLRSF PS-------- ---------- ENSP00000365714/1-460 ---------- ------LPAG LEPGSPLRSF PG-------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- -ESKRFVQWQ SSI------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 AAQPPQPSNP PRGAHPLSSG PQPGTAPATQ HGQAGAASGQ AYGQHSYSEP 701 750 ENSTTRP00000009598/1-418 ---------- ---------- -----CRRRP H--------- ---------- ENSP00000365714/1-460 ---------- ---------- -----CRRRP H--------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 AKPKKGQQLW NRMKPAPGTG GLKFNIQKRP FAVTSQSFGS TTEGQHSSFG 751 800 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 PQPNPEKAQN HRGSLSGKPD DWPQDMKEYV ERCFTACESE EDKDRTEKLL 801 850 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 KEVLQARLQD GSAYTIDWSR EPLPGHDLAP TKRSRKKMAA LECEDPEREL 851 900 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 KKQKRAARFQ HGHSRRLRLE PLVLQMGSLE SGGADPDWHE LQIVGTCPDI 901 950 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 TKHYLRLTCA PDPSTVRPVA VLKKSLCMVK SHWKEKQDYA FACEQMKSIR 951 1000 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 QDLTVQGVRT EFTVEVYETH ARIALEKGDH EEFNQCQTQL KSLYAENLPG 1001 1050 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 NVGEFTAYRI LYYIFTKNSG DITTELAYLT RELKADPCVA HALALRAAWA 1051 1100 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- ---------- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- ---------- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU009064/1-1143 LGNYHRFFRL YSHAPCMSGY LVDKFADRER KAALKAMIKT FRPALPVSYL 1101 1150 ENSTTRP00000009598/1-418 ---------- ---------- ---------- ---------- --- ENSP00000365714/1-460 ---------- ---------- ---------- ---------- --- ENSBTAP00000004515/1-450 ---------- ---------- ---------- ---------- --- bmy_22196T0/1-323 ---------- ---------- ---------- ---------- --- BACU009064/1-1143 QAELAFEGEA ACRAFLEPLG LAYTGPDNSS VDCRLSLAQL PAF