KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:11 2014 Check: 00 .. Name: ENSP00000269856/1-669 Len: 669 Check: 5262 Weight: 1.00 Name: ENSBTAP00000004519/1-653 Len: 669 Check: 8706 Weight: 1.00 Name: bmy_06948T0/1-664 Len: 669 Check: 191 Weight: 1.00 Name: BACU018729/1-522 Len: 669 Check: 7035 Weight: 1.00 // 1 50 ENSP00000269856/1-669 MDLRTAVYNA ARDGKLQLLQ KLLSGRSREE LDELTGEVAG GGTPLLIAAR ENSBTAP00000004519/1-653 MDLHTAVYNA ARDGKLQLLQ KLLSGRSREE LEELTGEVAS GGTPLLIAAR bmy_06948T0/1-664 MDLHTAVYNA ARDGKLQLLQ KLLSGRSREE LEELTGEVAS GGTPLLIAAR BACU018729/1-522 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000269856/1-669 YGHLDVVEYL VDRCGASVEA GGSVHFDGET IEGAPPLWAA SAAGHLDVVR ENSBTAP00000004519/1-653 YGHLDVVEYL VDRCGASVEA GGSVHFDGEI IEGAPPLWAA SAAGHLDVVR bmy_06948T0/1-664 YGHLDVVEYL VDRCGASVEA GGSVHFDGET IEGAPPLWAA SAAGHLDVVR BACU018729/1-522 ---------- ---------- ---------- ---------- -------VVR 101 150 ENSP00000269856/1-669 SLLRRGASVN RTTRTNSTPL RAACFDGHLE VVRYLVGEHQ ADLEVANRHG ENSBTAP00000004519/1-653 SLLRRGASVN RTTRTNSTPL RAACFDGHLE VVRYLVGEHQ ADLEVANRHG bmy_06948T0/1-664 SLLRRGASVN RTTRTNSTPL RAACFDGHLE VVRYLVGEHQ ADLEVANRHG BACU018729/1-522 SLLRRGASVN RTTRTNSTPL RAACFDGHLE VVRYLVGEHQ ADLEVANRHG 151 200 ENSP00000269856/1-669 HTCLMISCYK GHREIARYLL EQGAQVNRRS AKGNTALHDC AESGSLEILQ ENSBTAP00000004519/1-653 HTCLMISCYK GHREIARYLL EQGAQVNRRS AKGNTALHDC AESGSLEILQ bmy_06948T0/1-664 HTCLMISCYK GHREIARYLL EQGAQVNRRS AKGNTALHDC AESGSLEILQ BACU018729/1-522 HTCLMISCYK GHREIARYLL EQGAQVNRRS AKGNTALHDC AESGSLEILQ 201 250 ENSP00000269856/1-669 LLLGCKARME RDGYGMTPLL AASVTGHTNI VEYLIQEQPG QEQVAGGEAQ ENSBTAP00000004519/1-653 LLLGCNARME RDGYGMTPLL AASVTGHTNI VEYLIQEQPA GDE----QAQ bmy_06948T0/1-664 LLLGCNARME RDGYGMTPLL AASVTGHTNI VEYLIQEQPA GE-----EAR BACU018729/1-522 LLLGCNARME RDGYGMTPLL AASVTGHTNI VD-------- ---------- 251 300 ENSP00000269856/1-669 PGLPQEDPST SQGCAQPQGA PCCSSSPEEP LNGESYESCC PTSREAAVEA ENSBTAP00000004519/1-653 PGLAR----- ----VQPQGA R---SSPEEP PSGESYESCC PTSREAAVEA bmy_06948T0/1-664 PGLAREGPSS SPACAQPQGA RCGSSSPEES LSGESYESCC PTSREAAVEA BACU018729/1-522 ---------- ---------- ---------- --GESYESCC PTSREAAVEA 301 350 ENSP00000269856/1-669 LELLGATYVD KKRDLLGALK HWRRAMELRH QGGEYLPKPE PPQLVLAYDY ENSBTAP00000004519/1-653 LELLGATYVD KKRDLLGALK HWRRAMELRH QGGEYLPKPE PPQLVLAYDY bmy_06948T0/1-664 LELLGATYVD KKRDLLGALK HWRRAMELRH QGGAYLPKPE PPQLVLAYDY BACU018729/1-522 LELLGATYVD KKRDLLGALK HWRRAMELRH QGGAYLPKPE PPQLVLAYDY 351 400 ENSP00000269856/1-669 SREVNTTEEL EALITDPDEM RMQALLIRER ILGPSHPDTS YYIRYRGAVY ENSBTAP00000004519/1-653 SREVNTTEEL EALITDPDEM RMQALLIRER ILGPSHPDTS YYIRYRGAVY bmy_06948T0/1-664 SREVNTAEEL EALITDPDEM RMQALLIRER ILGPSHPDTS YYIRYRGAVY BACU018729/1-522 SREVNTAEEL EALITDPDEM RMQALLIRER ILGPSHPDTS YYIRYRGAVY 401 450 ENSP00000269856/1-669 ADSGNFERCI RLWKYALDMQ QSNLEPLSPM TASSFLSFAE LFSYVLQDRA ENSBTAP00000004519/1-653 ADSGNFERCI RLWKYALDMQ QNNLEPLSPM TASSFLSFAE LFSYVLQDRS bmy_06948T0/1-664 ADSGNFERCI RLWKYALDMQ QNNLEPLSPM TASSFLSFAE LFSYVLQDRS BACU018729/1-522 ADSGNFERCI RLWKYALDMQ QNNLEPLSPM TASSFLSFAE LFSYVLQDRS 451 500 ENSP00000269856/1-669 AKGSLGTQIG FADLMGVLTK GVREVERALQ LPREPGDSAQ FTKALAIILH ENSBTAP00000004519/1-653 AKGSLGTPIG FADLMGVLCK GVREVERALQ LPKEPGDSAQ FTKALAIILH bmy_06948T0/1-664 AKGSLGTPVG FADLMGVLCK GVREVERALQ LPKEPGDSAQ FTKALAIILH BACU018729/1-522 AKGSLGTPVG FADLMGVLCK GVREVERALQ LPKEPGDSAQ FTKALAIILH 501 550 ENSP00000269856/1-669 LLYLLEKVEC TPSQEHLKHQ TVYRLLKCAP RGKNGFTPLH MAVDKDTTNV ENSBTAP00000004519/1-653 LLYLLEKVEC TPDQEHLKHQ TVYRLLKCAP RGKNGFTPLH MAVDAETTNV bmy_06948T0/1-664 LLYLLEKVEC TPDQEHLKHQ KVYRLLKCAP RGKNGFTPLH MAVDAETTNV BACU018729/1-522 LLYLLEKVEC TPDQEHLKHQ KVYRLLKCAP RGKNGFTPLH MAVDAETTNV 551 600 ENSP00000269856/1-669 GRYPVGRFPS LHVVKVLLDC GADPDSRDFD NNTPLHIAAQ NNCPAIMNAL ENSBTAP00000004519/1-653 GRYPVGRFPS LQVVKVLLDC GADPDSRDFD NNTPLHIAAQ NNCPGIMNAL bmy_06948T0/1-664 GRYPVGRFPS LQVVKVLLDC GADPDSRDFD NNTPLHIAAQ NNCPGIMNAL BACU018729/1-522 GRYPVGRFPS LQVVKVLLDC GADPDSRDFD NNTPLHIAAQ NNCPGIMNAL 601 650 ENSP00000269856/1-669 IEAGAHMDAT NAFKKTAYEL LDEKLLARGT MQPFNYVTLQ CLAARALDKN ENSBTAP00000004519/1-653 IEAGAHMDAT NAFKKTAYEL LDEKLLAKST IQPFNYVTLQ CLAARALDKN bmy_06948T0/1-664 IEAGAHMDAT NAFKKTAYEL LDEKLLAKST IQPFNYVTLQ CLAARALDKN BACU018729/1-522 IEAGAHMDAT NAFKKTAYEL LDEKLLAKST IQPFNYVTLQ CLAARALDKN 651 700 ENSP00000269856/1-669 KIPYKGFIPE DLEAFIELH ENSBTAP00000004519/1-653 KIPYKGFIPE ELEAFIELH bmy_06948T0/1-664 KIPYKGFIPE ELEAFIELH BACU018729/1-522 KIPYKGFIPE ELEAFIELH