KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:13 2014 Check: 00 .. Name: ENSBTAP00000004536/1-462 Len: 791 Check: 1056 Weight: 1.00 Name: ENSP00000301454/1-468 Len: 791 Check: 7364 Weight: 1.00 Name: ENSTTRP00000007341/1-410 Len: 791 Check: 8110 Weight: 1.00 Name: bmy_06915T0/1-516 Len: 791 Check: 928 Weight: 1.00 Name: BACU002569/1-740 Len: 791 Check: 1668 Weight: 1.00 // 1 50 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- --------MR ENSP00000301454/1-468 ---------- ---------- ---------- ---------- --------MR ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- --------MR bmy_06915T0/1-516 SAPIPLPPNA EETQVLARAA TASSHXXXXX XXXXXXXXXX XXXXXXXXXX BACU002569/1-740 ---------- ---------- ---------- ---------- --------MR 51 100 ENSBTAP00000004536/1-462 GGPGEAERRQ RWGRLFEELD SNKDGRVDIR ELRQGLARLG GGDPDRGAQQ ENSP00000301454/1-468 GSPGDAERRQ RWGRLFEELD SNKDGRVDVH ELRQGLARLG GGNPDPGAQQ ENSTTRP00000007341/1-410 GGPGDAERRE RWGRLFEELD TNKDGRLDVH ELRQGLARMG GGSPDRGAQQ bmy_06915T0/1-516 XXPGDAERRQ RWGRLFEELD SNKDGRVDVH ELRQGLARLG GGKPDRGAQQ BACU002569/1-740 GGPGDAERRQ RWGRLFEELD SNKDGRVDVH ELRQGLARLG GGNPDGGAQQ 101 150 ENSBTAP00000004536/1-462 GISPEGDTDP DGGLDLEEFI LYLQEREQRL LLLFHSLDRN QDGQIDVSEI ENSP00000301454/1-468 GISSEGDADP DGGLDLEEFS RYLQEREQRL LLMFHSLDRN QDGHIDVSEI ENSTTRP00000007341/1-410 GISPEGDADS DGGLDLEEFI LYLQEREQRL LLLFHSLDRN QDGHIDVSEI bmy_06915T0/1-516 GISPEGDADS DGGLDLEEFI LYLQEREQRL LLLFHSLDRN QDGHIDVSEI BACU002569/1-740 GISPEGDADS DGGLDLEEFI LYLQEREQRL LLLFHSLDRN QDGHIDVSEI 151 200 ENSBTAP00000004536/1-462 QQSFRALGIS ISLEQAEKIL HSMDRDGTMT IDWQEWRDHF LLHSLENVED ENSP00000301454/1-468 QQSFRALGIS ISLEQAEKIL HSMDRDGTMT IDWQEWRDHF LLHSLENVED ENSTTRP00000007341/1-410 QQSFRALGIS ISLEQAEKIL HSMDRDDTMT IDWQEWRDHF LLHSLENVED bmy_06915T0/1-516 QQSFRALGIS ISLEQAEKIL HSMDRDGTMT IDWQEWRDHF LLHSLENVED BACU002569/1-740 QQSFRALGIS ISLEQAEKIL HSMDRDGTMT IDWQEWRDHF LLHSLENVED 201 250 ENSBTAP00000004536/1-462 VLYFWKHST- --VLDIGECL TVPDEFSEQE KLTGMWWKQL VAGAVAGAVS ENSP00000301454/1-468 VLYFWKHST- --VLDIGECL TVPDEFSKQE KLTGMWWKQL VAGAVAGAVS ENSTTRP00000007341/1-410 VLYFWKHSTL SFVLDIGECL TVPDEFSEQE KLTGTWWKQL VAGAMAGAVS bmy_06915T0/1-516 VLYFWKHST- --VLDIGECL TVPDEFSEQE KLTGMWWKQL VAGAMAGAVS BACU002569/1-740 VLYFWKHST- --VLDIGECL TVPDEFSEQE KLTGMWWKQL VAGAMAGAVS 251 300 ENSBTAP00000004536/1-462 RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMIQEGGVH SLWRGNGINV ENSP00000301454/1-468 RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMVLEGGIR SLWRGNGINV ENSTTRP00000007341/1-410 RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMIQEGGVR SLWRGNGINV bmy_06915T0/1-516 RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMIQEGGVR SLWRGNGINV BACU002569/1-740 RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMIQEGGVR SLWRGNGINV 301 350 ENSBTAP00000004536/1-462 LKIAPESAIK FMAYEQVGAD M--GSAGLAW ERGNVFGPLG VGIGSPMGCP ENSP00000301454/1-468 LKIAPESAIK FMAYEQIKRA ILGQQETLHV QERFVAGSLA GATAQTIIYP ENSTTRP00000007341/1-410 LKIAPESAIK FMAYEQIKRA IWGQQETLHV QERFVAGSLA GATAQTIIYP bmy_06915T0/1-516 LKIAPESAIK FMAYEQIKRA IWGQQETLHV QERFVAGSLA GATAQTIIYP BACU002569/1-740 LKIAPESAIK FMAYEQIKRA IWGQQETLHV QERFVAGSLA GVTAQTIIYP 351 400 ENSBTAP00000004536/1-462 QQVLKTRLTL RRTGQYKGLL DCAWQILERE GPRAFYRGYL PNVLGIIPYA ENSP00000301454/1-468 MEVLKTRLTL RRTGQYKGLL DCARRILERE GPRAFYRGYL PNVLGIIPYA ENSTTRP00000007341/1-410 MEVLKTRLTL RRTGQYKGLL DCAWRILERE GPRAFYRGYL PNVLGIIPYA bmy_06915T0/1-516 MEVLKTRLTL RRTGQYKGLL DCAWQILERE GPQAFYRGYL PNVLGIIPYA BACU002569/1-740 MEVLKTRLTL RRTGQYKGLL DCAWRILERE GPQAFYRGYL PNVLGIVPYA 401 450 ENSBTAP00000004536/1-462 GIDLAVYETL KNRWLQQYSH DSADPGILVL LACGTISSTC GQIASYPLAL ENSP00000301454/1-468 GIDLAVYETL KNWWLQQYSH DSADPGILVL LACGTISSTC GQIASYPLAL ENSTTRP00000007341/1-410 GIDLAVYETL KNRWLQRYSH DSADPGILVL LACGTISSTC GQIASYPLAL bmy_06915T0/1-516 GIDLAVYETL KNRWLQQYSH DSADPGILVL LACGTISSTC GQIASYPLAL BACU002569/1-740 GIDLAVYETL KNRWLQQYSH DSADPGILVL LACGTISSTC GQIASYPLAL 451 500 ENSBTAP00000004536/1-462 VRTRMQAQDT VEGSNP-TMC GVFRRILAQQ GWPGLYRGMT PTLLKVLPAG ENSP00000301454/1-468 VRTRMQAQAS IEGGPQLSML GLLRHILSQE GMRGLYRGIA PNFMKVIPAV ENSTTRP00000007341/1-410 VRTRMQAQ-- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 VRTRMQAQAS IEGAPQLSML GLLRHILSQE GVRGLYRGIA PNFMKVIPAV BACU002569/1-740 VRTRMQAQAS IEGAPQLSML GLLRHILSQE GVRGLYRGIA PNFMKVIPAV 501 550 ENSBTAP00000004536/1-462 GISYVVYEAM KKTLGV---- ---------- ---------- ---------- ENSP00000301454/1-468 SISYVVYENM KQALGVTSR- ---------- ---------- ---------- ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 SISYVVYENM KQALGVTSR- ---------- ---------- ---------- BACU002569/1-740 SISYVVYENM KQALGVTSRS LTSIMTSPTP RPLETEGPAS GAQVYSSKTN 551 600 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000301454/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 ---------- ---------- ---------- ---------- ---------- BACU002569/1-740 FMNLLGGIRS MVQEWDVCLL WRGNGINVLK IAPEYAIKFS VFEQCKNYFC 601 650 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000301454/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 ---------- ---------- ---------- ---------- ---------- BACU002569/1-740 GVHESPPFQE RLLASSLAVA TSQTLINPME VLKTRLTLCR TGQYKGLLDC 651 700 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000301454/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 ---------- ---------- ---------- ---------- ---------- BACU002569/1-740 ARHVVEEGTR VLYRGYLPNM LGVIPYACTD LAVYEMLRCL WLKSGRDMED 701 750 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- ---------- ENSP00000301454/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- ---------- bmy_06915T0/1-516 ---------- ---------- ---------- ---------- ---------- BACU002569/1-740 PSGLVSLSSV TVSTTCGQRA SYPLTSVRTR MQAQDTVEGS NLTMRGVFRQ 751 800 ENSBTAP00000004536/1-462 ---------- ---------- ---------- ---------- - ENSP00000301454/1-468 ---------- ---------- ---------- ---------- - ENSTTRP00000007341/1-410 ---------- ---------- ---------- ---------- - bmy_06915T0/1-516 ---------- ---------- ---------- ---------- - BACU002569/1-740 ILAQQHCPGL YRGMTSTLLK VLPAGGISYM VYEAMKKTLG V